RNA–Protein interactions for RNA: ENST00000367402.6

NUP43-202, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 882 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-202ENST00000367402 LRRC6Q86X45 466 aa9.68□□□□□ -0.86
NUP43-202ENST00000367402 C17orf82Q86X59 251 aaPredicted RBP9.68□□□□□ -0.86
NUP43-202ENST00000367402 CILP2Q8IUL8 1156 aa9.68□□□□□ -0.86
NUP43-202ENST00000367402 DENND6AQ8IWF6 608 aa9.68□□□□□ -0.86
NUP43-202ENST00000367402 TRIM48Q8IWZ4 208 aa9.68□□□□□ -0.86
NUP43-202ENST00000367402 PALM2Q8IXS6 379 aa9.68□□□□□ -0.86
NUP43-202ENST00000367402 LMNTD2Q8IXW0 634 aa9.68□□□□□ -0.86
NUP43-202ENST00000367402 CHCHD4Q8N4Q1 142 aa9.68□□□□□ -0.86
NUP43-202ENST00000367402 LILRA3Q8N6C8 439 aaPredicted RBP9.68□□□□□ -0.86
NUP43-202ENST00000367402 GABPB2Q8TAK5 448 aaPredicted RBP9.68□□□□□ -0.86
NUP43-202ENST00000367402 HM13Q8TCT9 377 aa9.68□□□□□ -0.86
NUP43-202ENST00000367402 ADAMTS14Q8WXS8 1223 aa9.68□□□□□ -0.86
NUP43-202ENST00000367402 IFT81Q8WYA0 676 aa9.68□□□□□ -0.86
NUP43-202ENST00000367402 ELMO1Q92556 727 aa9.68□□□□□ -0.86
NUP43-202ENST00000367402 CXorf40BQ96DE9 158 aa9.68□□□□□ -0.86
NUP43-202ENST00000367402 SLC38A3Q99624 504 aa9.68□□□□□ -0.86
NUP43-202ENST00000367402 FAM167BQ9BTA0 163 aa9.68□□□□□ -0.86
NUP43-202ENST00000367402 TSSK1BQ9BXA7 367 aa9.68□□□□□ -0.86
NUP43-202ENST00000367402 WWP1Q9H0M0 922 aa9.68□□□□□ -0.86
NUP43-202ENST00000367402 STN1Q9H668 368 aaKnown RBP9.68□□□□□ -0.86
NUP43-202ENST00000367402 SYNDIG1Q9H7V2 258 aa9.68□□□□□ -0.86
NUP43-202ENST00000367402 COG4Q9H9E3 785 aa9.68□□□□□ -0.86
NUP43-202ENST00000367402 WASH6PQ9NQA3 447 aa9.68□□□□□ -0.86
NUP43-202ENST00000367402 FAM114A2Q9NRY5 505 aa9.68□□□□□ -0.86
NUP43-202ENST00000367402 CPNE7Q9UBL6 633 aa9.68□□□□□ -0.86
NUP43-202ENST00000367402 DMGDHQ9UI17 866 aaKnown RBP9.68□□□□□ -0.86
NUP43-202ENST00000367402 GNPTGQ9UJJ9 305 aa9.68□□□□□ -0.86
NUP43-202ENST00000367402 CRYL1Q9Y2S2 319 aa9.68□□□□□ -0.86
NUP43-202ENST00000367402 SCN8AQ9UQD0 1980 aa9.68□□□□□ -0.86
NUP43-202ENST00000367402 TP53BP1Q12888 1972 aaPredicted RBP9.67□□□□□ -0.86
NUP43-202ENST00000367402 PRR19A6NJB7 356 aa9.67□□□□□ -0.86
NUP43-202ENST00000367402 EIF3HO15372 352 aaKnown RBP eCLIP9.67□□□□□ -0.86
NUP43-202ENST00000367402 HYAL3O43820 417 aaPredicted RBP9.67□□□□□ -0.86
NUP43-202ENST00000367402 TOP3BO95985 862 aaKnown RBP9.67□□□□□ -0.86
NUP43-202ENST00000367402 RPLP0P05388 317 aaKnown RBP9.67□□□□□ -0.86
NUP43-202ENST00000367402 ADRB1P08588 477 aa9.67□□□□□ -0.86
NUP43-202ENST00000367402 F7P08709 466 aaPredicted RBP9.67□□□□□ -0.86
NUP43-202ENST00000367402 RHOXF2BP0C7M4 288 aa9.67□□□□□ -0.86
NUP43-202ENST00000367402 SLC35G4P0C7Q5 338 aa9.67□□□□□ -0.86
NUP43-202ENST00000367402 JUPP14923 745 aa9.67□□□□□ -0.86
NUP43-202ENST00000367402 BRAFP15056 766 aa9.67□□□□□ -0.86
NUP43-202ENST00000367402 PNLIPP16233 465 aa9.67□□□□□ -0.86
NUP43-202ENST00000367402 XRCC1P18887 633 aaPredicted RBP9.67□□□□□ -0.86
NUP43-202ENST00000367402 CHRM3P20309 590 aa9.67□□□□□ -0.86
NUP43-202ENST00000367402 RPS3P23396 243 aaKnown RBP eCLIP9.67□□□□□ -0.86
NUP43-202ENST00000367402 SLC1A2P43004 574 aa9.67□□□□□ -0.86
NUP43-202ENST00000367402 PREPP48147 710 aa9.67□□□□□ -0.86
NUP43-202ENST00000367402 CARSP49589 748 aaKnown RBP9.67□□□□□ -0.86
NUP43-202ENST00000367402 CSE1LP55060 971 aaKnown RBP9.67□□□□□ -0.86
NUP43-202ENST00000367402 CLDN6P56747 220 aa9.67□□□□□ -0.86
NUP43-202ENST00000367402 OR1D5P58170 312 aa9.67□□□□□ -0.86
NUP43-202ENST00000367402 CCL7P80098 99 aa9.67□□□□□ -0.86
NUP43-202ENST00000367402 INSM1Q01101 510 aaPredicted RBP9.67□□□□□ -0.86
NUP43-202ENST00000367402 BOP1Q14137 746 aaKnown RBP9.67□□□□□ -0.86
NUP43-202ENST00000367402 RPE65Q16518 533 aa9.67□□□□□ -0.86
NUP43-202ENST00000367402 TYSND1Q2T9J0 566 aa9.67□□□□□ -0.86
NUP43-202ENST00000367402 SYTL3Q4VX76 610 aa9.67□□□□□ -0.86
NUP43-202ENST00000367402 HES3Q5TGS1 186 aa9.67□□□□□ -0.86
NUP43-202ENST00000367402 ZDHHC24Q6UX98 284 aa9.67□□□□□ -0.86
NUP43-202ENST00000367402 NAPRTQ6XQN6 538 aa9.67□□□□□ -0.86
NUP43-202ENST00000367402 RAB44Q7Z6P3 723 aaPredicted RBP9.67□□□□□ -0.86
NUP43-202ENST00000367402 ZNF761Q86XN6 746 aaPredicted RBP9.67□□□□□ -0.86
NUP43-202ENST00000367402 KRT222Q8N1A0 295 aa9.67□□□□□ -0.86
NUP43-202ENST00000367402 AVL9Q8NBF6 648 aa9.67□□□□□ -0.86
NUP43-202ENST00000367402 SEC14L1Q92503 715 aa9.67□□□□□ -0.86
NUP43-202ENST00000367402 LPGAT1Q92604 370 aa9.67□□□□□ -0.86
NUP43-202ENST00000367402 SH3KBP1Q96B97 665 aa9.67□□□□□ -0.86
NUP43-202ENST00000367402 CERS2Q96G23 380 aa9.67□□□□□ -0.86
NUP43-202ENST00000367402 INSM2Q96T92 566 aaPredicted RBP9.67□□□□□ -0.86
NUP43-202ENST00000367402 RHOXF2Q9BQY4 288 aa9.67□□□□□ -0.86
NUP43-202ENST00000367402 WDR83Q9BRX9 315 aaKnown RBP9.67□□□□□ -0.86
NUP43-202ENST00000367402 P2RY12Q9H244 342 aa9.67□□□□□ -0.86
NUP43-202ENST00000367402 SARS2Q9NP81 518 aaKnown RBP9.67□□□□□ -0.86
NUP43-202ENST00000367402 FBXO6Q9NRD1 293 aaPredicted RBP9.67□□□□□ -0.86
NUP43-202ENST00000367402 IMP3Q9NV31 184 aaKnown RBP9.67□□□□□ -0.86
NUP43-202ENST00000367402 INTS10Q9NVR2 710 aaKnown RBP9.67□□□□□ -0.86
NUP43-202ENST00000367402 KCNK4Q9NYG8 393 aa9.67□□□□□ -0.86
NUP43-202ENST00000367402 ZNF624Q9P2J8 865 aaPredicted RBP9.67□□□□□ -0.86
NUP43-202ENST00000367402 FBXO5Q9UKT4 447 aa9.67□□□□□ -0.86
NUP43-202ENST00000367402 CFAP20Q9Y6A4 193 aaKnown RBP9.67□□□□□ -0.86
NUP43-202ENST00000367402 TDRD6O60522 2096 aaKnown RBP9.67□□□□□ -0.86
NUP43-202ENST00000367402 COL5A1P20908 1838 aaPredicted RBP9.66□□□□□ -0.86
NUP43-202ENST00000367402 MED19A0JLT2 244 aaPredicted RBP9.66□□□□□ -0.86
NUP43-202ENST00000367402 FAM149AA5PLN7 773 aa9.66□□□□□ -0.86
NUP43-202ENST00000367402 E5RI56 91 aa9.66□□□□□ -0.86
NUP43-202ENST00000367402 IFRD1O00458 451 aaPredicted RBP9.66□□□□□ -0.86
NUP43-202ENST00000367402 LIN7AO14910 233 aaPredicted RBP9.66□□□□□ -0.86
NUP43-202ENST00000367402 CASC3O15234 703 aaKnown RBP9.66□□□□□ -0.86
NUP43-202ENST00000367402 B4GAT1O43505 415 aa9.66□□□□□ -0.86
NUP43-202ENST00000367402 HAUS5O94927 633 aa9.66□□□□□ -0.86
NUP43-202ENST00000367402 MT-CO3P00414 261 aa9.66□□□□□ -0.86
NUP43-202ENST00000367402 ESR1P03372 595 aa9.66□□□□□ -0.86
NUP43-202ENST00000367402 SPINK2P20155 84 aa9.66□□□□□ -0.86
NUP43-202ENST00000367402 PDHA2P29803 388 aa9.66□□□□□ -0.86
NUP43-202ENST00000367402 CCR7P32248 378 aa9.66□□□□□ -0.86
NUP43-202ENST00000367402 MAGEA4P43358 317 aa9.66□□□□□ -0.86
NUP43-202ENST00000367402 GPR3P46089 330 aa9.66□□□□□ -0.86
NUP43-202ENST00000367402 FASLGP48023 281 aa9.66□□□□□ -0.86
NUP43-202ENST00000367402 UBE2IP63279 158 aaKnown RBP9.66□□□□□ -0.86
NUP43-202ENST00000367402 MPP1Q00013 466 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms