RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 PUS10Q3MIT2 529 aaKnown RBP3.71□□□□□ -1.81
SYNE1-207ENST00000367255 DCLRE1AQ6PJP8 1040 aa3.71□□□□□ -1.81
SYNE1-207ENST00000367255 CDH22Q9UJ99 828 aa3.71□□□□□ -1.81
SYNE1-207ENST00000367255 MRPS7Q9Y2R9 242 aaKnown RBP3.71□□□□□ -1.81
SYNE1-207ENST00000367255 MAGEB4O15481 346 aaPredicted RBP3.71□□□□□ -1.82
SYNE1-207ENST00000367255 SGPL1O95470 568 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 PLEKP08567 350 aaPredicted RBP3.71□□□□□ -1.82
SYNE1-207ENST00000367255 PRPS1L1P21108 318 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 MPP2Q14168 576 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 PPA1Q15181 289 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 CTC1Q2NKJ3 1217 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 SLFN13Q68D06 897 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 PNCKQ6P2M8 343 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 RNF165Q6ZSG1 346 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 TFB1MQ8WVM0 346 aaKnown RBP3.71□□□□□ -1.82
SYNE1-207ENST00000367255 ANAPC16Q96DE5 110 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 FAM129BQ96TA1 746 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 HK3P52790 923 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 ITGA8P53708 1063 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 TBC1D25Q3MII6 688 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 FAM69AQ5T7M9 428 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 RAB12Q6IQ22 244 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 ZNF549Q6P9A3 640 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 ZNF783Q6ZMS7 281 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 GLB1L2Q8IW92 636 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 FAIM2Q9BWQ8 316 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 POLR1EQ9GZS1 481 aaKnown RBP3.71□□□□□ -1.82
SYNE1-207ENST00000367255 SIRPGQ9P1W8 387 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 NUDT5Q9UKK9 219 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 NT5C1B-RDH14C9J2C7 533 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 PSMB10P40306 273 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 FHITP49789 147 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 PGS1Q32NB8 556 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 METTL23Q86XA0 190 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 KCTD7Q96MP8 289 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 WFIKKN1Q96NZ8 548 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 OSBPL2Q9H1P3 480 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 SLCO1B3Q9NPD5 702 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 TMEM218A2RU14 115 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 KCNJ13O60928 360 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 UBE2SQ16763 222 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 FAHD2BQ6P2I3 314 aaPredicted RBP3.71□□□□□ -1.82
SYNE1-207ENST00000367255 LDHDQ86WU2 507 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 GPD1LQ8N335 351 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 BPIFB1Q8TDL5 484 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 SNAPC3Q92966 411 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 FAHD2AQ96GK7 314 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 VRTNQ9H8Y1 702 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 ARL8BQ9NVJ2 186 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 MAD2L2Q9UI95 211 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 CLIC1O00299 241 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 CASC3O15234 703 aaKnown RBP3.71□□□□□ -1.82
SYNE1-207ENST00000367255 POP7O75817 140 aaKnown RBP3.71□□□□□ -1.82
SYNE1-207ENST00000367255 LGI1O95970 557 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 TP53P04637 393 aaPredicted RBP3.71□□□□□ -1.82
SYNE1-207ENST00000367255 SNRPB2P08579 225 aaKnown RBP3.71□□□□□ -1.82
SYNE1-207ENST00000367255 SLC2A4P14672 509 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 SH3PXD2AQ5TCZ1 1133 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 CD300LGQ6UXG3 332 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 QSOX2Q6ZRP7 698 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 GAREM2Q75VX8 874 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 SYT13Q7L8C5 426 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 ABRAQ8N0Z2 381 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 DTX3Q8N9I9 347 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 ZSWIM2Q8NEG5 633 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 OR7G1Q8NGA0 311 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 GPR63Q9BZJ6 419 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 BCO1Q9HAY6 547 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 GFOD1Q9NXC2 390 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 ZMAT5Q9UDW3 170 aaKnown RBP3.71□□□□□ -1.82
SYNE1-207ENST00000367255 ZNF510Q9Y2H8 683 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 FTLP02792 175 aaPredicted RBP3.71□□□□□ -1.82
SYNE1-207ENST00000367255 OR56A5P0C7T3 313 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 CDK2P24941 298 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 POLR2LP62875 67 aaKnown RBP3.71□□□□□ -1.82
SYNE1-207ENST00000367255 PRKCEQ02156 737 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 C11orf70Q9BRQ4 267 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 FBXO44Q9H4M3 255 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 PDE10AQ9Y233 779 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 PCDHGA8Q9Y5G5 932 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 SUV39H1O43463 412 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 FKBP2P26885 142 aaKnown RBP3.71□□□□□ -1.82
SYNE1-207ENST00000367255 RGS19P49795 217 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 TIGD6Q17RP2 521 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 ACAD10Q6JQN1 1059 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 WNK4Q96J92 1243 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 PCDHGA4Q9Y5G9 962 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 IVNS1ABPQ9Y6Y0 642 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.71□□□□□ -1.82
SYNE1-207ENST00000367255 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.71□□□□□ -1.82
SYNE1-207ENST00000367255 SIGLEC16A6NMB1 481 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 ALOX12P18054 663 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 LBPP18428 481 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 SLC1A6P48664 564 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 LHX1P48742 406 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 YWHAHQ04917 246 aaPredicted RBP3.71□□□□□ -1.82
SYNE1-207ENST00000367255 PWP1Q13610 501 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 PUM1Q14671 1186 aaKnown RBP eCLIP3.71□□□□□ -1.82
SYNE1-207ENST00000367255 IFNLR1Q8IU57 520 aaPredicted RBP3.71□□□□□ -1.82
SYNE1-207ENST00000367255 CHST13Q8NET6 341 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms