RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 SELENOOQ9BVL4 669 aa8.25□□□□□ -1.09
HMGB1P39-201ENST00000366304 TRIM7Q9C029 511 aa8.25□□□□□ -1.09
HMGB1P39-201ENST00000366304 ACTR5Q9H9F9 607 aaPredicted RBP8.25□□□□□ -1.09
HMGB1P39-201ENST00000366304 TRIM39Q9HCM9 518 aa8.25□□□□□ -1.09
HMGB1P39-201ENST00000366304 NT5MQ9NPB1 228 aa8.25□□□□□ -1.09
HMGB1P39-201ENST00000366304 SEMA3GQ9NS98 782 aa8.25□□□□□ -1.09
HMGB1P39-201ENST00000366304 OLAHQ9NV23 265 aa8.25□□□□□ -1.09
HMGB1P39-201ENST00000366304 ADAM22Q9P0K1 906 aa8.25□□□□□ -1.09
HMGB1P39-201ENST00000366304 BTRCQ9Y297 605 aa8.25□□□□□ -1.09
HMGB1P39-201ENST00000366304 CFAP20Q9Y6A4 193 aaKnown RBP8.25□□□□□ -1.09
HMGB1P39-201ENST00000366304 JMJD1CQ15652 2540 aa8.25□□□□□ -1.09
HMGB1P39-201ENST00000366304 PRRC2AP48634 2157 aaKnown RBP8.24□□□□□ -1.09
HMGB1P39-201ENST00000366304 UBA6A0AVT1 1052 aaPredicted RBP8.24□□□□□ -1.09
HMGB1P39-201ENST00000366304 TMEM150CB9EJG8 249 aa8.24□□□□□ -1.09
HMGB1P39-201ENST00000366304 H3BMH7 237 aa8.24□□□□□ -1.09
HMGB1P39-201ENST00000366304 CCL21O00585 134 aa8.24□□□□□ -1.09
HMGB1P39-201ENST00000366304 EPHB6O15197 1021 aa8.24□□□□□ -1.09
HMGB1P39-201ENST00000366304 SLC25A14O95258 325 aaPredicted RBP8.24□□□□□ -1.09
HMGB1P39-201ENST00000366304 ZBTB11O95625 1053 aaPredicted RBP8.24□□□□□ -1.09
HMGB1P39-201ENST00000366304 CD99P14209 185 aa8.24□□□□□ -1.09
HMGB1P39-201ENST00000366304 CAPN3P20807 821 aa8.24□□□□□ -1.09
HMGB1P39-201ENST00000366304 HSPA9P38646 679 aaKnown RBP8.24□□□□□ -1.09
HMGB1P39-201ENST00000366304 PPP1R2P41236 205 aa8.24□□□□□ -1.09
HMGB1P39-201ENST00000366304 MMP13P45452 471 aa8.24□□□□□ -1.09
HMGB1P39-201ENST00000366304 SCTRP47872 440 aa8.24□□□□□ -1.09
HMGB1P39-201ENST00000366304 ARL4DP49703 201 aa8.24□□□□□ -1.09
HMGB1P39-201ENST00000366304 KLK7P49862 253 aa8.24□□□□□ -1.09
HMGB1P39-201ENST00000366304 ART1P52961 327 aa8.24□□□□□ -1.09
HMGB1P39-201ENST00000366304 AIF1P55008 147 aa8.24□□□□□ -1.09
HMGB1P39-201ENST00000366304 TLE4Q04727 773 aa8.24□□□□□ -1.09
HMGB1P39-201ENST00000366304 NIPAL4Q0D2K0 466 aa8.24□□□□□ -1.09
HMGB1P39-201ENST00000366304 GALNT3Q14435 633 aa8.24□□□□□ -1.09
HMGB1P39-201ENST00000366304 SSPNQ14714 243 aa8.24□□□□□ -1.09
HMGB1P39-201ENST00000366304 CLEC16AQ2KHT3 1053 aa8.24□□□□□ -1.09
HMGB1P39-201ENST00000366304 PPP6R3Q5H9R7 873 aaPredicted RBP8.24□□□□□ -1.09
HMGB1P39-201ENST00000366304 LRRTM4Q86VH4 590 aa8.24□□□□□ -1.09
HMGB1P39-201ENST00000366304 PHF13Q86YI8 300 aaPredicted RBP8.24□□□□□ -1.09
HMGB1P39-201ENST00000366304 TEX26Q8N6G2 289 aa8.24□□□□□ -1.09
HMGB1P39-201ENST00000366304 LPCAT1Q8NF37 534 aa8.24□□□□□ -1.09
HMGB1P39-201ENST00000366304 ARRDC2Q8TBH0 407 aa8.24□□□□□ -1.09
HMGB1P39-201ENST00000366304 CNDP1Q96KN2 507 aa8.24□□□□□ -1.09
HMGB1P39-201ENST00000366304 FER1L6-AS2Q96M78 137 aa8.24□□□□□ -1.09
HMGB1P39-201ENST00000366304 TIGD1Q96MW7 591 aa8.24□□□□□ -1.09
HMGB1P39-201ENST00000366304 GBP5Q96PP8 586 aa8.24□□□□□ -1.09
HMGB1P39-201ENST00000366304 LYSMD1Q96S90 227 aa8.24□□□□□ -1.09
HMGB1P39-201ENST00000366304 CD180Q99467 661 aa8.24□□□□□ -1.09
HMGB1P39-201ENST00000366304 TRIM56Q9BRZ2 755 aaKnown RBP8.24□□□□□ -1.09
HMGB1P39-201ENST00000366304 TIMM29Q9BSF4 260 aa8.24□□□□□ -1.09
HMGB1P39-201ENST00000366304 TDRD1Q9BXT4 1180 aaKnown RBP8.24□□□□□ -1.09
HMGB1P39-201ENST00000366304 STK33Q9BYT3 514 aa8.24□□□□□ -1.09
HMGB1P39-201ENST00000366304 GANQ9H2C0 597 aa8.24□□□□□ -1.09
HMGB1P39-201ENST00000366304 MCCC2Q9HCC0 563 aa8.24□□□□□ -1.09
HMGB1P39-201ENST00000366304 SLC6A20Q9NP91 592 aa8.24□□□□□ -1.09
HMGB1P39-201ENST00000366304 SLC22A11Q9NSA0 550 aa8.24□□□□□ -1.09
HMGB1P39-201ENST00000366304 HRASLS2Q9NWW9 162 aa8.24□□□□□ -1.09
HMGB1P39-201ENST00000366304 PCSK1NQ9UHG2 260 aa8.24□□□□□ -1.09
HMGB1P39-201ENST00000366304 SH3BGRL2Q9UJC5 107 aa8.24□□□□□ -1.09
HMGB1P39-201ENST00000366304 PSMD13Q9UNM6 376 aa8.24□□□□□ -1.09
HMGB1P39-201ENST00000366304 CDYLQ9Y232 598 aa8.24□□□□□ -1.09
HMGB1P39-201ENST00000366304 PTRH2Q9Y3E5 179 aaKnown RBP8.24□□□□□ -1.09
HMGB1P39-201ENST00000366304 FER1L5A0AVI2 2057 aa8.24□□□□□ -1.09
HMGB1P39-201ENST00000366304 TRGV8A0A0C4DH27 118 aa8.23□□□□□ -1.09
HMGB1P39-201ENST00000366304 C1orf232A0A0U1RR37 186 aa8.23□□□□□ -1.09
HMGB1P39-201ENST00000366304 OR6C74A6NCV1 312 aa8.23□□□□□ -1.09
HMGB1P39-201ENST00000366304 KMOO15229 486 aa8.23□□□□□ -1.09
HMGB1P39-201ENST00000366304 DAPK3O43293 454 aa8.23□□□□□ -1.09
HMGB1P39-201ENST00000366304 ZNF749O43361 778 aa8.23□□□□□ -1.09
HMGB1P39-201ENST00000366304 MTA2O94776 668 aa8.23□□□□□ -1.09
HMGB1P39-201ENST00000366304 IPO13O94829 963 aaKnown RBP8.23□□□□□ -1.09
HMGB1P39-201ENST00000366304 KLHL18O94889 574 aa8.23□□□□□ -1.09
HMGB1P39-201ENST00000366304 PVRP15151 417 aa8.23□□□□□ -1.09
HMGB1P39-201ENST00000366304 CD1EP15812 388 aa8.23□□□□□ -1.09
HMGB1P39-201ENST00000366304 TCF4P15884 667 aa8.23□□□□□ -1.09
HMGB1P39-201ENST00000366304 IDSP22304 550 aa8.23□□□□□ -1.09
HMGB1P39-201ENST00000366304 AMPD1P23109 780 aa8.23□□□□□ -1.09
HMGB1P39-201ENST00000366304 PBX1P40424 430 aa8.23□□□□□ -1.09
HMGB1P39-201ENST00000366304 HADHAP40939 763 aa8.23□□□□□ -1.09
HMGB1P39-201ENST00000366304 CA7P43166 264 aa8.23□□□□□ -1.09
HMGB1P39-201ENST00000366304 MTIF2P46199 727 aaKnown RBP8.23□□□□□ -1.09
HMGB1P39-201ENST00000366304 SLC9A5Q14940 896 aa8.23□□□□□ -1.09
HMGB1P39-201ENST00000366304 PLCL1Q15111 1095 aa8.23□□□□□ -1.09
HMGB1P39-201ENST00000366304 C1orf189Q5VU69 101 aa8.23□□□□□ -1.09
HMGB1P39-201ENST00000366304 MLIPQ5VWP3 458 aa8.23□□□□□ -1.09
HMGB1P39-201ENST00000366304 B3GNTL1Q67FW5 361 aaPredicted RBP8.23□□□□□ -1.09
HMGB1P39-201ENST00000366304 DNAJC24Q6P3W2 148 aa8.23□□□□□ -1.09
HMGB1P39-201ENST00000366304 GFRALQ6UXV0 394 aa8.23□□□□□ -1.09
HMGB1P39-201ENST00000366304 RBM12BQ8IXT5 1001 aaKnown RBP8.23□□□□□ -1.09
HMGB1P39-201ENST00000366304 AMER2Q8N7J2 671 aa8.23□□□□□ -1.09
HMGB1P39-201ENST00000366304 ADAMTS18Q8TE60 1221 aa8.23□□□□□ -1.09
HMGB1P39-201ENST00000366304 NAT14Q8WUY8 206 aa8.23□□□□□ -1.09
HMGB1P39-201ENST00000366304 TM9SF4Q92544 642 aa8.23□□□□□ -1.09
HMGB1P39-201ENST00000366304 GLYATL1Q969I3 302 aa8.23□□□□□ -1.09
HMGB1P39-201ENST00000366304 CCDC34Q96HJ3 373 aa8.23□□□□□ -1.09
HMGB1P39-201ENST00000366304 SPATA16Q9BXB7 569 aa8.23□□□□□ -1.09
HMGB1P39-201ENST00000366304 KLHL25Q9H0H3 589 aa8.23□□□□□ -1.09
HMGB1P39-201ENST00000366304 NDST4Q9H3R1 872 aa8.23□□□□□ -1.09
HMGB1P39-201ENST00000366304 SOHLH2Q9NX45 425 aa8.23□□□□□ -1.09
HMGB1P39-201ENST00000366304 RWDD2AQ9UIY3 292 aa8.23□□□□□ -1.09
HMGB1P39-201ENST00000366304 FBXL4Q9UKA2 621 aa8.23□□□□□ -1.09
HMGB1P39-201ENST00000366304 COL6A5A8TX70 2615 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms