RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 CYBBP04839 570 aa18.78■□□□□ 0.6
CMTM3-201ENST00000361909 MTHFRP42898 656 aa18.78■□□□□ 0.6
CMTM3-201ENST00000361909 ZNF691Q5VV52 312 aa18.78■□□□□ 0.6
CMTM3-201ENST00000361909 ISCA2Q86U28 154 aa18.78■□□□□ 0.6
CMTM3-201ENST00000361909 IPMKQ8NFU5 416 aa18.78■□□□□ 0.6
CMTM3-201ENST00000361909 DHRS1Q96LJ7 313 aa18.78■□□□□ 0.6
CMTM3-201ENST00000361909 OR2B2Q9GZK3 357 aa18.78■□□□□ 0.6
CMTM3-201ENST00000361909 GLOD4Q9HC38 313 aa18.78■□□□□ 0.6
CMTM3-201ENST00000361909 PRG3Q9Y2Y8 225 aaPredicted RBP18.78■□□□□ 0.6
CMTM3-201ENST00000361909 FAM234BA2RU67 622 aa18.78■□□□□ 0.6
CMTM3-201ENST00000361909 SNPHO15079 494 aa18.78■□□□□ 0.6
CMTM3-201ENST00000361909 ALDH7A1P49419 539 aaKnown RBP18.78■□□□□ 0.6
CMTM3-201ENST00000361909 IFITM2Q01629 132 aa18.78■□□□□ 0.6
CMTM3-201ENST00000361909 ELAVL2Q12926 359 aaKnown RBP18.78■□□□□ 0.6
CMTM3-201ENST00000361909 MEP1AQ16819 746 aa18.78■□□□□ 0.6
CMTM3-201ENST00000361909 ADPRMQ3LIE5 342 aa18.78■□□□□ 0.6
CMTM3-201ENST00000361909 LRIT3Q3SXY7 679 aa18.78■□□□□ 0.6
CMTM3-201ENST00000361909 OTOP3Q7RTS5 596 aa18.78■□□□□ 0.6
CMTM3-201ENST00000361909 LRRTM3Q86VH5 581 aa18.78■□□□□ 0.6
CMTM3-201ENST00000361909 REXO5Q96IC2 774 aaKnown RBP18.78■□□□□ 0.6
CMTM3-201ENST00000361909 DSN1Q9H410 356 aa18.78■□□□□ 0.6
CMTM3-201ENST00000361909 NPAP1Q9NZP6 1156 aa18.78■□□□□ 0.6
CMTM3-201ENST00000361909 FAM92AA1XBS5 289 aa18.77■□□□□ 0.6
CMTM3-201ENST00000361909 SYCE1LA8MT33 242 aa18.77■□□□□ 0.6
CMTM3-201ENST00000361909 HHLA1C9JL84 531 aa18.77■□□□□ 0.6
CMTM3-201ENST00000361909 SLC16A6O15403 523 aa18.77■□□□□ 0.6
CMTM3-201ENST00000361909 TPD52L2O43399 206 aaKnown RBP18.77■□□□□ 0.6
CMTM3-201ENST00000361909 PAPSS2O95340 614 aaPredicted RBP18.77■□□□□ 0.6
CMTM3-201ENST00000361909 F9P00740 461 aa18.77■□□□□ 0.6
CMTM3-201ENST00000361909 TCF3P15923 654 aa18.77■□□□□ 0.6
CMTM3-201ENST00000361909 BDNFP23560 247 aa18.77■□□□□ 0.6
CMTM3-201ENST00000361909 ISL1P61371 349 aa18.77■□□□□ 0.6
CMTM3-201ENST00000361909 LRRC26Q2I0M4 334 aa18.77■□□□□ 0.6
CMTM3-201ENST00000361909 CTU2Q2VPK5 515 aaKnown RBP18.77■□□□□ 0.6
CMTM3-201ENST00000361909 SYT6Q5T7P8 510 aaPredicted RBP18.77■□□□□ 0.6
CMTM3-201ENST00000361909 NECAB2Q7Z6G3 386 aa18.77■□□□□ 0.6
CMTM3-201ENST00000361909 KIAA1958Q8N8K9 716 aa18.77■□□□□ 0.6
CMTM3-201ENST00000361909 SETD9Q8NE22 299 aa18.77■□□□□ 0.6
CMTM3-201ENST00000361909 RHEBL1Q8TAI7 183 aa18.77■□□□□ 0.6
CMTM3-201ENST00000361909 NDNFQ8TB73 568 aa18.77■□□□□ 0.6
CMTM3-201ENST00000361909 VPS33AQ96AX1 596 aa18.77■□□□□ 0.6
CMTM3-201ENST00000361909 IL12RB2Q99665 862 aa18.77■□□□□ 0.6
CMTM3-201ENST00000361909 TRIT1Q9H3H1 467 aaKnown RBP18.77■□□□□ 0.6
CMTM3-201ENST00000361909 POPDC3Q9HBV1 291 aa18.77■□□□□ 0.6
CMTM3-201ENST00000361909 SLC2A6Q9UGQ3 507 aa18.77■□□□□ 0.6
CMTM3-201ENST00000361909 INTS6Q9UL03 887 aaKnown RBP18.77■□□□□ 0.6
CMTM3-201ENST00000361909 HSPE1-MOB4S4R3N1 261 aa18.77■□□□□ 0.6
CMTM3-201ENST00000361909 A3GALT2U3KPV4 340 aa18.77■□□□□ 0.6
CMTM3-201ENST00000361909 PTPRDP23468 1912 aa18.77■□□□□ 0.6
CMTM3-201ENST00000361909 ABHD14A-ACY1A0A1B0GW23 586 aa18.76■□□□□ 0.59
CMTM3-201ENST00000361909 TBKBP1A7MCY6 615 aa18.76■□□□□ 0.59
CMTM3-201ENST00000361909 IFRD1O00458 451 aaPredicted RBP18.76■□□□□ 0.59
CMTM3-201ENST00000361909 TOR1BO14657 336 aa18.76■□□□□ 0.59
CMTM3-201ENST00000361909 SLC22A3O75751 556 aa18.76■□□□□ 0.59
CMTM3-201ENST00000361909 C1RP00736 705 aa18.76■□□□□ 0.59
CMTM3-201ENST00000361909 TIMP1P01033 207 aa18.76■□□□□ 0.59
CMTM3-201ENST00000361909 MT-ND1P03886 318 aa18.76■□□□□ 0.59
CMTM3-201ENST00000361909 RCVRNP35243 200 aa18.76■□□□□ 0.59
CMTM3-201ENST00000361909 CXCR4P61073 352 aa18.76■□□□□ 0.59
CMTM3-201ENST00000361909 FADDQ13158 208 aa18.76■□□□□ 0.59
CMTM3-201ENST00000361909 MRPL58Q14197 206 aaKnown RBP18.76■□□□□ 0.59
CMTM3-201ENST00000361909 SYPL2Q5VXT5 272 aa18.76■□□□□ 0.59
CMTM3-201ENST00000361909 SULT1C3Q6IMI6 304 aa18.76■□□□□ 0.59
CMTM3-201ENST00000361909 ZNF280DQ6N043 979 aa18.76■□□□□ 0.59
CMTM3-201ENST00000361909 DCP2Q8IU60 420 aaKnown RBP18.76■□□□□ 0.59
CMTM3-201ENST00000361909 ELMOD1Q8N336 334 aa18.76■□□□□ 0.59
CMTM3-201ENST00000361909 OR52E4Q8NGH9 312 aa18.76■□□□□ 0.59
CMTM3-201ENST00000361909 VWCEQ96DN2 955 aa18.76■□□□□ 0.59
CMTM3-201ENST00000361909 BTBD2Q9BX70 525 aa18.76■□□□□ 0.59
CMTM3-201ENST00000361909 FSD1LQ9BXM9 530 aa18.76■□□□□ 0.59
CMTM3-201ENST00000361909 TMLHEQ9NVH6 421 aa18.76■□□□□ 0.59
CMTM3-201ENST00000361909 DKK3Q9UBP4 350 aa18.76■□□□□ 0.59
CMTM3-201ENST00000361909 KLQ9UEF7 1012 aa18.76■□□□□ 0.59
CMTM3-201ENST00000361909 TPRKBQ9Y3C4 175 aa18.76■□□□□ 0.59
CMTM3-201ENST00000361909 NLRC5Q86WI3 1866 aa18.76■□□□□ 0.59
CMTM3-201ENST00000361909 PSMD11O00231 422 aa18.76■□□□□ 0.59
CMTM3-201ENST00000361909 CHEK2O96017 543 aa18.76■□□□□ 0.59
CMTM3-201ENST00000361909 GALTP07902 379 aa18.76■□□□□ 0.59
CMTM3-201ENST00000361909 JUNDP17535 347 aa18.76■□□□□ 0.59
CMTM3-201ENST00000361909 GGT1P19440 569 aa18.76■□□□□ 0.59
CMTM3-201ENST00000361909 SLC11A1P49279 550 aa18.76■□□□□ 0.59
CMTM3-201ENST00000361909 GATMP50440 423 aa18.76■□□□□ 0.59
CMTM3-201ENST00000361909 POLR2JP52435 117 aaKnown RBP18.76■□□□□ 0.59
CMTM3-201ENST00000361909 TUBA1BP68363 451 aa18.76■□□□□ 0.59
CMTM3-201ENST00000361909 EMX1Q04741 257 aaPredicted RBP18.76■□□□□ 0.59
CMTM3-201ENST00000361909 LCP2Q13094 533 aa18.76■□□□□ 0.59
CMTM3-201ENST00000361909 KCNAB2Q13303 367 aa18.76■□□□□ 0.59
CMTM3-201ENST00000361909 PAGE3Q5JUK9 113 aa18.76■□□□□ 0.59
CMTM3-201ENST00000361909 TUBA1AQ71U36 451 aa18.76■□□□□ 0.59
CMTM3-201ENST00000361909 HEATR4Q86WZ0 1026 aa18.76■□□□□ 0.59
CMTM3-201ENST00000361909 LYSMD2Q8IV50 215 aa18.76■□□□□ 0.59
CMTM3-201ENST00000361909 PTGR2Q8N8N7 351 aaPredicted RBP18.76■□□□□ 0.59
CMTM3-201ENST00000361909 ANKRD49Q8WVL7 239 aa18.76■□□□□ 0.59
CMTM3-201ENST00000361909 SGCDQ92629 289 aa18.76■□□□□ 0.59
CMTM3-201ENST00000361909 AMBRA1Q9C0C7 1298 aa18.76■□□□□ 0.59
CMTM3-201ENST00000361909 GORASP2Q9H8Y8 452 aa18.76■□□□□ 0.59
CMTM3-201ENST00000361909 CCNB1IP1Q9NPC3 277 aa18.76■□□□□ 0.59
CMTM3-201ENST00000361909 TMEM30AQ9NV96 361 aa18.76■□□□□ 0.59
CMTM3-201ENST00000361909 MARCH5Q9NX47 278 aa18.76■□□□□ 0.59
CMTM3-201ENST00000361909 ORC6Q9Y5N6 252 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms