RNA–Protein interactions for RNA: ENST00000361308.8

LMNA-202, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 1,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-202ENST00000361308 CBSP35520 551 aa16.65■□□□□ 0.26
LMNA-202ENST00000361308 SLC26A3P40879 764 aa16.65■□□□□ 0.26
LMNA-202ENST00000361308 CTBSQ01459 385 aa16.65■□□□□ 0.26
LMNA-202ENST00000361308 DMPKQ09013 629 aa16.65■□□□□ 0.26
LMNA-202ENST00000361308 ILF3Q12906 894 aaKnown RBP eCLIP16.65■□□□□ 0.26
LMNA-202ENST00000361308 ZNF658BQ4V348 819 aaPredicted RBP16.65■□□□□ 0.26
LMNA-202ENST00000361308 ACSBG2Q5FVE4 666 aa16.65■□□□□ 0.26
LMNA-202ENST00000361308 METRNLQ641Q3 311 aa16.65■□□□□ 0.26
LMNA-202ENST00000361308 SH2D5Q6ZV89 423 aa16.65■□□□□ 0.26
LMNA-202ENST00000361308 SPNS2Q8IVW8 549 aa16.65■□□□□ 0.26
LMNA-202ENST00000361308 LILRA3Q8N6C8 439 aaPredicted RBP16.65■□□□□ 0.26
LMNA-202ENST00000361308 ANKRD49Q8WVL7 239 aa16.65■□□□□ 0.26
LMNA-202ENST00000361308 UBXN10Q96LJ8 280 aa16.65■□□□□ 0.26
LMNA-202ENST00000361308 ARRDC1-AS1Q9H2J1 176 aa16.65■□□□□ 0.26
LMNA-202ENST00000361308 TCEAL2Q9H3H9 227 aaPredicted RBP16.65■□□□□ 0.26
LMNA-202ENST00000361308 OSGEPL1Q9H4B0 414 aa16.65■□□□□ 0.26
LMNA-202ENST00000361308 H3BM21 787 aa16.65■□□□□ 0.26
LMNA-202ENST00000361308 SLCO2B1O94956 709 aa16.65■□□□□ 0.26
LMNA-202ENST00000361308 EPN2O95208 641 aa16.65■□□□□ 0.26
LMNA-202ENST00000361308 WISP3O95389 354 aaPredicted RBP16.65■□□□□ 0.26
LMNA-202ENST00000361308 COL6A2P12110 1019 aa16.65■□□□□ 0.26
LMNA-202ENST00000361308 ENO3P13929 434 aaPredicted RBP16.65■□□□□ 0.26
LMNA-202ENST00000361308 IDSP22304 550 aa16.65■□□□□ 0.26
LMNA-202ENST00000361308 CTSKP43235 329 aa16.65■□□□□ 0.26
LMNA-202ENST00000361308 PREPP48147 710 aa16.65■□□□□ 0.26
LMNA-202ENST00000361308 CCT5P48643 541 aa16.65■□□□□ 0.26
LMNA-202ENST00000361308 MAGOHP61326 146 aaKnown RBP16.65■□□□□ 0.26
LMNA-202ENST00000361308 HNRNPKP61978 463 aaKnown RBP eCLIP16.65■□□□□ 0.265e-6■■□□□ 11.6
LMNA-202ENST00000361308 IRF9Q00978 393 aa16.65■□□□□ 0.26
LMNA-202ENST00000361308 CSHL1Q14406 222 aa16.65■□□□□ 0.26
LMNA-202ENST00000361308 TCEA2Q15560 299 aa16.65■□□□□ 0.26
LMNA-202ENST00000361308 TRIM61Q5EBN2 209 aa16.65■□□□□ 0.26
LMNA-202ENST00000361308 PRRT3Q5FWE3 981 aa16.65■□□□□ 0.26
LMNA-202ENST00000361308 SLC23A3Q6PIS1 610 aa16.65■□□□□ 0.26
LMNA-202ENST00000361308 FAM83HQ6ZRV2 1179 aaPredicted RBP16.65■□□□□ 0.26
LMNA-202ENST00000361308 SPATA6LQ8N4H0 392 aa16.65■□□□□ 0.26
LMNA-202ENST00000361308 CCL4L1Q8NHW4 92 aa16.65■□□□□ 0.26
LMNA-202ENST00000361308 SKA2Q8WVK7 121 aaPredicted RBP16.65■□□□□ 0.26
LMNA-202ENST00000361308 ATOH1Q92858 354 aaPredicted RBP16.65■□□□□ 0.26
LMNA-202ENST00000361308 ALKBH8Q96BT7 664 aaKnown RBP16.65■□□□□ 0.26
LMNA-202ENST00000361308 LINGO1Q96FE5 620 aa16.65■□□□□ 0.26
LMNA-202ENST00000361308 TSNARE1Q96NA8 513 aa16.65■□□□□ 0.26
LMNA-202ENST00000361308 GSDMCQ9BYG8 508 aa16.65■□□□□ 0.26
LMNA-202ENST00000361308 DCDC2Q9UHG0 476 aa16.65■□□□□ 0.26
LMNA-202ENST00000361308 ACSL5Q9ULC5 683 aa16.65■□□□□ 0.26
LMNA-202ENST00000361308 SLC6A14Q9UN76 642 aa16.65■□□□□ 0.26
LMNA-202ENST00000361308 SMG5Q9UPR3 1016 aaKnown RBP16.65■□□□□ 0.26
LMNA-202ENST00000361308 CDYLQ9Y232 598 aa16.65■□□□□ 0.26
LMNA-202ENST00000361308 ACTL7BQ9Y614 415 aa16.65■□□□□ 0.26
LMNA-202ENST00000361308 HMGB1P1B2RPK0 211 aaPredicted RBP16.64■□□□□ 0.25
LMNA-202ENST00000361308 EIF3FO00303 357 aaPredicted RBP16.64■□□□□ 0.25
LMNA-202ENST00000361308 KLHL2O95198 593 aa16.64■□□□□ 0.25
LMNA-202ENST00000361308 LTA4HP09960 611 aaKnown RBP16.64■□□□□ 0.25
LMNA-202ENST00000361308 AK4P27144 223 aaPredicted RBP16.64■□□□□ 0.25
LMNA-202ENST00000361308 PDHA2P29803 388 aa16.64■□□□□ 0.25
LMNA-202ENST00000361308 GMPRP36959 345 aa16.64■□□□□ 0.25
LMNA-202ENST00000361308 MPLP40238 635 aa16.64■□□□□ 0.25
LMNA-202ENST00000361308 SLC18A2Q05940 514 aa16.64■□□□□ 0.25
LMNA-202ENST00000361308 RPA4Q13156 261 aa16.64■□□□□ 0.25
LMNA-202ENST00000361308 FAM83EQ2M2I3 478 aa16.64■□□□□ 0.25
LMNA-202ENST00000361308 TTMPQ5BVD1 217 aa16.64■□□□□ 0.25
LMNA-202ENST00000361308 LAIR1Q6GTX8 287 aa16.64■□□□□ 0.25
LMNA-202ENST00000361308 LRRC8EQ6NSJ5 796 aa16.64■□□□□ 0.25
LMNA-202ENST00000361308 VRK3Q8IV63 474 aa16.64■□□□□ 0.25
LMNA-202ENST00000361308 TLCD1Q96CP7 247 aa16.64■□□□□ 0.25
LMNA-202ENST00000361308 DPEP2Q9H4A9 486 aa16.64■□□□□ 0.25
LMNA-202ENST00000361308 MED4Q9NPJ6 270 aa16.64■□□□□ 0.25
LMNA-202ENST00000361308 SPASTQ9UBP0 616 aa16.64■□□□□ 0.25
LMNA-202ENST00000361308 RUVBL2Q9Y230 463 aaKnown RBP16.64■□□□□ 0.25
LMNA-202ENST00000361308 ST14Q9Y5Y6 855 aa16.64■□□□□ 0.25
LMNA-202ENST00000361308 TNRC6BQ9UPQ9 1833 aaKnown RBP16.63■□□□□ 0.25
LMNA-202ENST00000361308 PATE3B3GLJ2 98 aa16.63■□□□□ 0.25
LMNA-202ENST00000361308 COPEO14579 308 aa16.63■□□□□ 0.25
LMNA-202ENST00000361308 BRAFP15056 766 aa16.63■□□□□ 0.25
LMNA-202ENST00000361308 CREB1P16220 341 aa16.63■□□□□ 0.25
LMNA-202ENST00000361308 RPL10P27635 214 aaKnown RBP16.63■□□□□ 0.25
LMNA-202ENST00000361308 ACTR1BP42025 376 aa16.63■□□□□ 0.25
LMNA-202ENST00000361308 ARRB1P49407 418 aaPredicted RBP16.63■□□□□ 0.25
LMNA-202ENST00000361308 ACTR1AP61163 376 aa16.63■□□□□ 0.25
LMNA-202ENST00000361308 BNC1Q01954 994 aa16.63■□□□□ 0.25
LMNA-202ENST00000361308 C1orf61Q13536 156 aa16.63■□□□□ 0.25
LMNA-202ENST00000361308 GBX1Q14549 363 aa16.63■□□□□ 0.25
LMNA-202ENST00000361308 ELOCQ15369 112 aa16.63■□□□□ 0.25
LMNA-202ENST00000361308 AGAP9Q5VTM2 703 aa16.63■□□□□ 0.25
LMNA-202ENST00000361308 SLC30A9Q6PML9 568 aa16.63■□□□□ 0.25
LMNA-202ENST00000361308 TAF8Q7Z7C8 310 aa16.63■□□□□ 0.25
LMNA-202ENST00000361308 SLC22A15Q8IZD6 547 aa16.63■□□□□ 0.25
LMNA-202ENST00000361308 MYO1HQ8N1T3 1032 aa16.63■□□□□ 0.25
LMNA-202ENST00000361308 PLD6Q8N2A8 252 aaKnown RBP16.63■□□□□ 0.25
LMNA-202ENST00000361308 GPBAR1Q8TDU6 330 aa16.63■□□□□ 0.25
LMNA-202ENST00000361308 KCTD4Q8WVF5 259 aa16.63■□□□□ 0.25
LMNA-202ENST00000361308 GLMNQ92990 594 aa16.63■□□□□ 0.25
LMNA-202ENST00000361308 NXNL1Q96CM4 212 aa16.63■□□□□ 0.25
LMNA-202ENST00000361308 PDLIM5Q96HC4 596 aaKnown RBP16.63■□□□□ 0.25
LMNA-202ENST00000361308 ELF4Q99607 663 aaPredicted RBP16.63■□□□□ 0.25
LMNA-202ENST00000361308 CAAP1Q9H8G2 361 aa16.63■□□□□ 0.25
LMNA-202ENST00000361308 CAPN10Q9HC96 672 aa16.63■□□□□ 0.25
LMNA-202ENST00000361308 TSR3Q9UJK0 312 aaKnown RBP16.63■□□□□ 0.25
LMNA-202ENST00000361308 FANCMQ8IYD8 2048 aa16.62■□□□□ 0.25
LMNA-202ENST00000361308 SNX2O60749 519 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms