RNA–Protein interactions for RNA: ENST00000359984.12

CLN3-205, Transcript of CLN3, battenin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN3, Length 1,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-205ENST00000359984 KMOO15229 486 aa19.52■□□□□ 0.71
CLN3-205ENST00000359984 MYL2P10916 166 aa19.52■□□□□ 0.71
CLN3-205ENST00000359984 KCNA4P22459 653 aa19.52■□□□□ 0.71
CLN3-205ENST00000359984 CD27P26842 260 aa19.52■□□□□ 0.71
CLN3-205ENST00000359984 RABIFP47224 123 aa19.52■□□□□ 0.71
CLN3-205ENST00000359984 PDK4Q16654 411 aa19.52■□□□□ 0.71
CLN3-205ENST00000359984 ZSCAN26Q16670 478 aa19.52■□□□□ 0.71
CLN3-205ENST00000359984 SYTL3Q4VX76 610 aa19.52■□□□□ 0.71
CLN3-205ENST00000359984 ENPP7Q6UWV6 458 aa19.52■□□□□ 0.71
CLN3-205ENST00000359984 ZYG11AQ6WRX3 759 aa19.52■□□□□ 0.71
CLN3-205ENST00000359984 WDR5BQ86VZ2 330 aa19.52■□□□□ 0.71
CLN3-205ENST00000359984 C10orf107Q8IVU9 208 aa19.52■□□□□ 0.71
CLN3-205ENST00000359984 CFAP206Q8IYR0 622 aa19.52■□□□□ 0.71
CLN3-205ENST00000359984 OR56A4Q8NGH8 313 aa19.52■□□□□ 0.71
CLN3-205ENST00000359984 STAG3L4Q8TBR4 150 aa19.52■□□□□ 0.71
CLN3-205ENST00000359984 MAGEB18Q96M61 343 aa19.52■□□□□ 0.71
CLN3-205ENST00000359984 WDR92Q96MX6 357 aa19.52■□□□□ 0.71
CLN3-205ENST00000359984 ATOH8Q96SQ7 321 aa19.52■□□□□ 0.71
CLN3-205ENST00000359984 CCDC134Q9H6E4 229 aa19.52■□□□□ 0.71
CLN3-205ENST00000359984 SIRPGQ9P1W8 387 aa19.52■□□□□ 0.71
CLN3-205ENST00000359984 PRDM4Q9UKN5 801 aa19.52■□□□□ 0.71
CLN3-205ENST00000359984 SUFUQ9UMX1 484 aa19.52■□□□□ 0.71
CLN3-205ENST00000359984 DNMT3AQ9Y6K1 912 aaPredicted RBP19.52■□□□□ 0.71
CLN3-205ENST00000359984 PLXND1Q9Y4D7 1925 aa19.51■□□□□ 0.71
CLN3-205ENST00000359984 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.51■□□□□ 0.71
CLN3-205ENST00000359984 TOR1BO14657 336 aa19.51■□□□□ 0.71
CLN3-205ENST00000359984 DLX3O60479 287 aa19.51■□□□□ 0.71
CLN3-205ENST00000359984 KELP23276 732 aa19.51■□□□□ 0.71
CLN3-205ENST00000359984 HTR1BP28222 390 aa19.51■□□□□ 0.71
CLN3-205ENST00000359984 PREPP48147 710 aa19.51■□□□□ 0.71
CLN3-205ENST00000359984 CSTF1Q05048 431 aaKnown RBP19.51■□□□□ 0.71
CLN3-205ENST00000359984 AMZ2Q86W34 360 aa19.51■□□□□ 0.71
CLN3-205ENST00000359984 TMEFF1Q8IYR6 380 aa19.51■□□□□ 0.71
CLN3-205ENST00000359984 OXR1Q8N573 874 aa19.51■□□□□ 0.71
CLN3-205ENST00000359984 TMEM159Q96B96 161 aa19.51■□□□□ 0.71
CLN3-205ENST00000359984 SLC6A18Q96N87 628 aa19.51■□□□□ 0.71
CLN3-205ENST00000359984 COG4Q9H9E3 785 aa19.51■□□□□ 0.71
CLN3-205ENST00000359984 EIF2B4Q9UI10 523 aaKnown RBP19.51■□□□□ 0.71
CLN3-205ENST00000359984 MOSPD1Q9UJG1 213 aa19.51■□□□□ 0.71
CLN3-205ENST00000359984 TTC28Q96AY4 2481 aa19.51■□□□□ 0.71
CLN3-205ENST00000359984 EML5Q05BV3 1969 aa19.5■□□□□ 0.71
CLN3-205ENST00000359984 LIN7AO14910 233 aaPredicted RBP19.5■□□□□ 0.71
CLN3-205ENST00000359984 KERAO60938 352 aa19.5■□□□□ 0.71
CLN3-205ENST00000359984 BGNP21810 368 aa19.5■□□□□ 0.71
CLN3-205ENST00000359984 LSP1P33241 339 aa19.5■□□□□ 0.71
CLN3-205ENST00000359984 PYCR3Q53H96 274 aa19.5■□□□□ 0.71
CLN3-205ENST00000359984 FAM83HQ6ZRV2 1179 aaPredicted RBP19.5■□□□□ 0.71
CLN3-205ENST00000359984 DTWD2Q8NBA8 298 aa19.5■□□□□ 0.71
CLN3-205ENST00000359984 HM13Q8TCT9 377 aa19.5■□□□□ 0.71
CLN3-205ENST00000359984 OR1E3Q8WZA6 343 aa19.5■□□□□ 0.71
CLN3-205ENST00000359984 GLMNQ92990 594 aa19.5■□□□□ 0.71
CLN3-205ENST00000359984 HSPA12BQ96MM6 686 aa19.5■□□□□ 0.71
CLN3-205ENST00000359984 ADAMTS6Q9UKP5 1117 aa19.5■□□□□ 0.71
CLN3-205ENST00000359984 RNF112Q9ULX5 631 aa19.5■□□□□ 0.71
CLN3-205ENST00000359984 ZDBF2Q9HCK1 2354 aa19.5■□□□□ 0.71
CLN3-205ENST00000359984 CCDC189A1A4V9 331 aa19.5■□□□□ 0.71
CLN3-205ENST00000359984 PRSS38A1L453 326 aa19.5■□□□□ 0.71
CLN3-205ENST00000359984 NEMP2A6NFY4 417 aa19.5■□□□□ 0.71
CLN3-205ENST00000359984 MPC1LP0DKB6 136 aa19.5■□□□□ 0.71
CLN3-205ENST00000359984 NEFHP12036 1026 aa19.5■□□□□ 0.71
CLN3-205ENST00000359984 MAOBP27338 520 aa19.5■□□□□ 0.71
CLN3-205ENST00000359984 PDHA2P29803 388 aa19.5■□□□□ 0.71
CLN3-205ENST00000359984 THOP1P52888 689 aa19.5■□□□□ 0.71
CLN3-205ENST00000359984 NFE2L1Q14494 772 aa19.5■□□□□ 0.71
CLN3-205ENST00000359984 SBSNQ6UWP8 590 aa19.5■□□□□ 0.71
CLN3-205ENST00000359984 NEK10Q6ZWH5 1172 aa19.5■□□□□ 0.71
CLN3-205ENST00000359984 ZNF75CPQ92670 426 aaPredicted RBP19.5■□□□□ 0.71
CLN3-205ENST00000359984 CYP4F12Q9HCS2 524 aa19.5■□□□□ 0.71
CLN3-205ENST00000359984 AASDHPPTQ9NRN7 309 aa19.5■□□□□ 0.71
CLN3-205ENST00000359984 OXSMQ9NWU1 459 aa19.5■□□□□ 0.71
CLN3-205ENST00000359984 DNAJC16Q9Y2G8 782 aa19.5■□□□□ 0.71
CLN3-205ENST00000359984 MEI4A8MW99 385 aa19.49■□□□□ 0.71
CLN3-205ENST00000359984 MTHFD2P13995 350 aa19.49■□□□□ 0.71
CLN3-205ENST00000359984 TAC1P20366 129 aa19.49■□□□□ 0.71
CLN3-205ENST00000359984 ATP5F1P24539 256 aaPredicted RBP19.49■□□□□ 0.71
CLN3-205ENST00000359984 GNPDA1P46926 289 aa19.49■□□□□ 0.71
CLN3-205ENST00000359984 CHST15Q7LFX5 561 aaPredicted RBP19.49■□□□□ 0.71
CLN3-205ENST00000359984 ADAMTSL2Q86TH1 951 aa19.49■□□□□ 0.71
CLN3-205ENST00000359984 LONP2Q86WA8 852 aa19.49■□□□□ 0.71
CLN3-205ENST00000359984 GALNT13Q8IUC8 556 aa19.49■□□□□ 0.71
CLN3-205ENST00000359984 SLC22A15Q8IZD6 547 aa19.49■□□□□ 0.71
CLN3-205ENST00000359984 SLC22A18ASQ8N1D0 253 aa19.49■□□□□ 0.71
CLN3-205ENST00000359984 SKA2Q8WVK7 121 aaPredicted RBP19.49■□□□□ 0.71
CLN3-205ENST00000359984 EXT2Q93063 718 aa19.49■□□□□ 0.71
CLN3-205ENST00000359984 PDXPQ96GD0 296 aa19.49■□□□□ 0.71
CLN3-205ENST00000359984 DUSP15Q9H1R2 295 aaPredicted RBP19.49■□□□□ 0.71
CLN3-205ENST00000359984 PNMA8BQ9ULN7 279 aaPredicted RBP19.49■□□□□ 0.71
CLN3-205ENST00000359984 SRRM3A6NNA2 597 aaPredicted RBP19.48■□□□□ 0.71
CLN3-205ENST00000359984 UBXN8O00124 270 aa19.48■□□□□ 0.71
CLN3-205ENST00000359984 TNFRSF10CO14798 259 aa19.48■□□□□ 0.71
CLN3-205ENST00000359984 THEGLP0DJG4 465 aa19.48■□□□□ 0.71
CLN3-205ENST00000359984 FGF3P11487 239 aaPredicted RBP19.48■□□□□ 0.71
CLN3-205ENST00000359984 ACP5P13686 325 aa19.48■□□□□ 0.71
CLN3-205ENST00000359984 HK3P52790 923 aa19.48■□□□□ 0.71
CLN3-205ENST00000359984 HNRNPH2P55795 449 aaKnown RBP19.48■□□□□ 0.71
CLN3-205ENST00000359984 CHI3L2Q15782 390 aa19.48■□□□□ 0.71
CLN3-205ENST00000359984 GPSM1Q86YR5 675 aa19.48■□□□□ 0.71
CLN3-205ENST00000359984 FBXL6Q8N531 539 aa19.48■□□□□ 0.71
CLN3-205ENST00000359984 LRRC8CQ8TDW0 803 aa19.48■□□□□ 0.71
CLN3-205ENST00000359984 ASB11Q8WXH4 323 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms