RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 LYPLAL1Q5VWZ2 237 aa13.66□□□□□ -0.22
CSNK1E-201ENST00000359867 TAS2R42Q7RTR8 314 aa13.66□□□□□ -0.22
CSNK1E-201ENST00000359867 CBARPQ8N350 705 aaPredicted RBP13.66□□□□□ -0.22
CSNK1E-201ENST00000359867 RNF148Q8N7C7 305 aa13.66□□□□□ -0.22
CSNK1E-201ENST00000359867 ACTRT2Q8TDY3 377 aa13.66□□□□□ -0.22
CSNK1E-201ENST00000359867 VOPP1Q96AW1 172 aa13.66□□□□□ -0.22
CSNK1E-201ENST00000359867 ATOH8Q96SQ7 321 aa13.66□□□□□ -0.22
CSNK1E-201ENST00000359867 ERVK-6Q9BXR3 956 aa13.66□□□□□ -0.22
CSNK1E-201ENST00000359867 ZDHHC6Q9H6R6 413 aa13.66□□□□□ -0.22
CSNK1E-201ENST00000359867 SLC2A4RGQ9NR83 387 aa13.66□□□□□ -0.22
CSNK1E-201ENST00000359867 DUSP12Q9UNI6 340 aa13.66□□□□□ -0.22
CSNK1E-201ENST00000359867 MYOCOSA0A1B0GUC4 107 aa13.66□□□□□ -0.22
CSNK1E-201ENST00000359867 AIM2O14862 343 aa13.66□□□□□ -0.22
CSNK1E-201ENST00000359867 KERAO60938 352 aa13.66□□□□□ -0.22
CSNK1E-201ENST00000359867 HNF1BP35680 557 aa13.66□□□□□ -0.22
CSNK1E-201ENST00000359867 CCDC92Q53HC0 331 aaPredicted RBP13.66□□□□□ -0.22
CSNK1E-201ENST00000359867 CARD16Q5EG05 197 aa13.66□□□□□ -0.22
CSNK1E-201ENST00000359867 SH2D4BQ5SQS7 431 aa13.66□□□□□ -0.22
CSNK1E-201ENST00000359867 ZNF554Q86TJ5 538 aa13.66□□□□□ -0.22
CSNK1E-201ENST00000359867 PLPP6Q8IY26 295 aa13.66□□□□□ -0.22
CSNK1E-201ENST00000359867 CHPFQ8IZ52 775 aa13.66□□□□□ -0.22
CSNK1E-201ENST00000359867 CPSF7Q8N684 471 aaKnown RBP13.66□□□□□ -0.22
CSNK1E-201ENST00000359867 PAF1Q8N7H5 531 aa13.66□□□□□ -0.22
CSNK1E-201ENST00000359867 ECHDC3Q96DC8 303 aa13.66□□□□□ -0.22
CSNK1E-201ENST00000359867 PHF21BQ96EK2 531 aa13.66□□□□□ -0.22
CSNK1E-201ENST00000359867 MAELQ96JY0 434 aaKnown RBP13.66□□□□□ -0.22
CSNK1E-201ENST00000359867 OR52B2Q96RD2 323 aa13.66□□□□□ -0.22
CSNK1E-201ENST00000359867 GPR21Q99679 349 aa13.66□□□□□ -0.22
CSNK1E-201ENST00000359867 P2RY12Q9H244 342 aa13.66□□□□□ -0.22
CSNK1E-201ENST00000359867 GSTO2Q9H4Y5 243 aa13.66□□□□□ -0.22
CSNK1E-201ENST00000359867 C8orf33Q9H7E9 229 aaPredicted RBP13.66□□□□□ -0.22
CSNK1E-201ENST00000359867 NDRG2Q9UN36 371 aaKnown RBP13.66□□□□□ -0.22
CSNK1E-201ENST00000359867 BPTFQ12830 3046 aa13.66□□□□□ -0.22
CSNK1E-201ENST00000359867 C1orf232A0A0U1RR37 186 aa13.65□□□□□ -0.22
CSNK1E-201ENST00000359867 H3BNX3 289 aa13.65□□□□□ -0.22
CSNK1E-201ENST00000359867 POP4O95707 220 aaKnown RBP13.65□□□□□ -0.22
CSNK1E-201ENST00000359867 OR4D1Q15615 310 aa13.65□□□□□ -0.22
CSNK1E-201ENST00000359867 LSM12Q3MHD2 195 aaKnown RBP13.65□□□□□ -0.22
CSNK1E-201ENST00000359867 POM121L1PQ3SYA9 428 aa13.65□□□□□ -0.22
CSNK1E-201ENST00000359867 TMEM196Q5HYL7 178 aa13.65□□□□□ -0.22
CSNK1E-201ENST00000359867 CTSL3PQ5NE16 218 aa13.65□□□□□ -0.22
CSNK1E-201ENST00000359867 CCDC80Q76M96 950 aa13.65□□□□□ -0.22
CSNK1E-201ENST00000359867 MPP4Q96JB8 637 aa13.65□□□□□ -0.22
CSNK1E-201ENST00000359867 ZNF641Q96N77 438 aaPredicted RBP13.65□□□□□ -0.22
CSNK1E-201ENST00000359867 NUF2Q9BZD4 464 aa13.65□□□□□ -0.22
CSNK1E-201ENST00000359867 WDR55Q9H6Y2 383 aaPredicted RBP13.65□□□□□ -0.22
CSNK1E-201ENST00000359867 MRGBPQ9NV56 204 aa13.65□□□□□ -0.22
CSNK1E-201ENST00000359867 THAP10Q9P2Z0 257 aaPredicted RBP13.65□□□□□ -0.22
CSNK1E-201ENST00000359867 CIDEBQ9UHD4 219 aa13.65□□□□□ -0.22
CSNK1E-201ENST00000359867 TRMT6Q9UJA5 497 aaKnown RBP13.65□□□□□ -0.22
CSNK1E-201ENST00000359867 SYCE1LA8MT33 242 aa13.65□□□□□ -0.22
CSNK1E-201ENST00000359867 H3BMM5 538 aa13.65□□□□□ -0.22
CSNK1E-201ENST00000359867 HNRNPLP14866 589 aaKnown RBP eCLIP13.65□□□□□ -0.22
CSNK1E-201ENST00000359867 RPS3P23396 243 aaKnown RBP eCLIP13.65□□□□□ -0.22
CSNK1E-201ENST00000359867 KIR2DL1P43626 348 aaPredicted RBP13.65□□□□□ -0.22
CSNK1E-201ENST00000359867 FOLH1Q04609 750 aa13.65□□□□□ -0.22
CSNK1E-201ENST00000359867 NUDT18Q6ZVK8 323 aa13.65□□□□□ -0.22
CSNK1E-201ENST00000359867 SNX20Q7Z614 316 aa13.65□□□□□ -0.22
CSNK1E-201ENST00000359867 ADGRG6Q86SQ4 1221 aa13.65□□□□□ -0.22
CSNK1E-201ENST00000359867 CUZD1Q86UP6 607 aa13.65□□□□□ -0.22
CSNK1E-201ENST00000359867 SPATA24Q86W54 205 aa13.65□□□□□ -0.22
CSNK1E-201ENST00000359867 FBXW8Q8N3Y1 598 aa13.65□□□□□ -0.22
CSNK1E-201ENST00000359867 TMEM245Q9H330 911 aa13.65□□□□□ -0.22
CSNK1E-201ENST00000359867 SUV39H2Q9H5I1 410 aa13.65□□□□□ -0.22
CSNK1E-201ENST00000359867 SLC8A2Q9UPR5 921 aa13.65□□□□□ -0.22
CSNK1E-201ENST00000359867 TDRKHQ9Y2W6 561 aaKnown RBP13.65□□□□□ -0.22
CSNK1E-201ENST00000359867 MTF2Q9Y483 593 aaPredicted RBP13.65□□□□□ -0.22
CSNK1E-201ENST00000359867 PRMT5O14744 637 aaPredicted RBP13.64□□□□□ -0.23
CSNK1E-201ENST00000359867 OR1I1O60431 355 aa13.64□□□□□ -0.23
CSNK1E-201ENST00000359867 EPHX1P07099 455 aa13.64□□□□□ -0.23
CSNK1E-201ENST00000359867 MTHFD2P13995 350 aa13.64□□□□□ -0.23
CSNK1E-201ENST00000359867 ZNF7P17097 686 aaPredicted RBP13.64□□□□□ -0.23
CSNK1E-201ENST00000359867 RECQLP46063 649 aaPredicted RBP13.64□□□□□ -0.23
CSNK1E-201ENST00000359867 KLF10Q13118 480 aa13.64□□□□□ -0.23
CSNK1E-201ENST00000359867 UNC50Q53HI1 259 aa13.64□□□□□ -0.23
CSNK1E-201ENST00000359867 ZNF362Q5T0B9 420 aaPredicted RBP13.64□□□□□ -0.23
CSNK1E-201ENST00000359867 CACUL1Q86Y37 369 aa13.64□□□□□ -0.23
CSNK1E-201ENST00000359867 SPNS2Q8IVW8 549 aa13.64□□□□□ -0.23
CSNK1E-201ENST00000359867 LZICQ8WZA0 190 aa13.64□□□□□ -0.23
CSNK1E-201ENST00000359867 FAM3CQ92520 227 aa13.64□□□□□ -0.23
CSNK1E-201ENST00000359867 SCRN2Q96FV2 425 aa13.64□□□□□ -0.23
CSNK1E-201ENST00000359867 MARK4Q96L34 752 aa13.64□□□□□ -0.23
CSNK1E-201ENST00000359867 LENG8Q96PV6 779 aaPredicted RBP13.64□□□□□ -0.23
CSNK1E-201ENST00000359867 CD320Q9NPF0 282 aa13.64□□□□□ -0.23
CSNK1E-201ENST00000359867 AK5Q9Y6K8 562 aa13.64□□□□□ -0.23
CSNK1E-201ENST00000359867 C15orf38-AP3S2A0A0A6YYH1 394 aa13.64□□□□□ -0.23
CSNK1E-201ENST00000359867 TRBV5-4A0A0C4DH59 114 aa13.64□□□□□ -0.23
CSNK1E-201ENST00000359867 SUPT7LO94864 414 aa13.64□□□□□ -0.23
CSNK1E-201ENST00000359867 CLDN7O95471 211 aa13.64□□□□□ -0.23
CSNK1E-201ENST00000359867 UGT2B4P06133 528 aa13.64□□□□□ -0.23
CSNK1E-201ENST00000359867 CTSLP07711 333 aa13.64□□□□□ -0.23
CSNK1E-201ENST00000359867 ITGALP20701 1170 aa13.64□□□□□ -0.23
CSNK1E-201ENST00000359867 EPHA3P29320 983 aa13.64□□□□□ -0.23
CSNK1E-201ENST00000359867 NUDT2P50583 147 aa13.64□□□□□ -0.23
CSNK1E-201ENST00000359867 IL2P60568 153 aa13.64□□□□□ -0.23
CSNK1E-201ENST00000359867 GSTM4Q03013 218 aa13.64□□□□□ -0.23
CSNK1E-201ENST00000359867 GRSF1Q12849 480 aaKnown RBP eCLIP13.64□□□□□ -0.23
CSNK1E-201ENST00000359867 GK3PQ14409 553 aa13.64□□□□□ -0.23
CSNK1E-201ENST00000359867 MLF2Q15773 248 aaPredicted RBP13.64□□□□□ -0.23
CSNK1E-201ENST00000359867 HNRNPA1L2Q32P51 320 aaKnown RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms