RNA–Protein interactions for RNA: ENST00000359541.6

GTF3C2-202, Transcript of general transcription factor IIIC subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C2, Length 3,992 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-202ENST00000359541 C17orf80Q9BSJ5 609 aa9.17□□□□□ -0.94
GTF3C2-202ENST00000359541 CLK4Q9HAZ1 481 aaKnown RBP9.17□□□□□ -0.94
GTF3C2-202ENST00000359541 PIDD1Q9HB75 910 aa9.17□□□□□ -0.94
GTF3C2-202ENST00000359541 CMTM6Q9NX76 183 aa9.17□□□□□ -0.94
GTF3C2-202ENST00000359541 PTTG2Q9NZH5 202 aa9.17□□□□□ -0.94
GTF3C2-202ENST00000359541 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.17□□□□□ -0.94
GTF3C2-202ENST00000359541 ZNF232Q9UNY5 417 aa9.17□□□□□ -0.94
GTF3C2-202ENST00000359541 VWA8A3KMH1 1905 aa9.17□□□□□ -0.94
GTF3C2-202ENST00000359541 TULP3O75386 442 aa9.17□□□□□ -0.94
GTF3C2-202ENST00000359541 DEAF1O75398 565 aaPredicted RBP9.17□□□□□ -0.94
GTF3C2-202ENST00000359541 TSPAN12O95859 305 aa9.17□□□□□ -0.94
GTF3C2-202ENST00000359541 MAPK1P28482 360 aa9.17□□□□□ -0.94
GTF3C2-202ENST00000359541 HTR1EP28566 365 aa9.17□□□□□ -0.94
GTF3C2-202ENST00000359541 PRKCQQ04759 706 aa9.17□□□□□ -0.94
GTF3C2-202ENST00000359541 FAM98BQ52LJ0 330 aaKnown RBP9.17□□□□□ -0.94
GTF3C2-202ENST00000359541 MPP7Q5T2T1 576 aa9.17□□□□□ -0.94
GTF3C2-202ENST00000359541 RBM44Q6ZP01 1051 aaKnown RBP9.17□□□□□ -0.94
GTF3C2-202ENST00000359541 ZFAND4Q86XD8 727 aa9.17□□□□□ -0.94
GTF3C2-202ENST00000359541 CBARPQ8N350 705 aaPredicted RBP9.17□□□□□ -0.94
GTF3C2-202ENST00000359541 TCAIMQ8N3R3 496 aa9.17□□□□□ -0.94
GTF3C2-202ENST00000359541 LEMD2Q8NC56 503 aa9.17□□□□□ -0.94
GTF3C2-202ENST00000359541 OR4F6Q8NGB9 312 aa9.17□□□□□ -0.94
GTF3C2-202ENST00000359541 OR6K2Q8NGY2 324 aa9.17□□□□□ -0.94
GTF3C2-202ENST00000359541 DIS3LQ8TF46 1054 aaKnown RBP9.17□□□□□ -0.94
GTF3C2-202ENST00000359541 TMEM125Q96AQ2 219 aa9.17□□□□□ -0.94
GTF3C2-202ENST00000359541 COPS8Q99627 209 aa9.17□□□□□ -0.94
GTF3C2-202ENST00000359541 SLC30A3Q99726 388 aa9.17□□□□□ -0.94
GTF3C2-202ENST00000359541 HEBP1Q9NRV9 189 aa9.17□□□□□ -0.94
GTF3C2-202ENST00000359541 SLC8A2Q9UPR5 921 aa9.17□□□□□ -0.94
GTF3C2-202ENST00000359541 POLR3HQ9Y535 204 aaPredicted RBP9.17□□□□□ -0.94
GTF3C2-202ENST00000359541 A0A087WXM4 84 aa9.16□□□□□ -0.94
GTF3C2-202ENST00000359541 IQCF5A8MTL0 148 aa9.16□□□□□ -0.94
GTF3C2-202ENST00000359541 K7EPI3 171 aa9.16□□□□□ -0.94
GTF3C2-202ENST00000359541 SCAMP3O14828 347 aaKnown RBP9.16□□□□□ -0.94
GTF3C2-202ENST00000359541 HTRA2O43464 458 aaPredicted RBP9.16□□□□□ -0.94
GTF3C2-202ENST00000359541 HOXB6P17509 224 aaKnown RBP9.16□□□□□ -0.94
GTF3C2-202ENST00000359541 ACRV1P26436 265 aa9.16□□□□□ -0.94
GTF3C2-202ENST00000359541 HSPA7P48741 367 aa9.16□□□□□ -0.94
GTF3C2-202ENST00000359541 CHRNB3Q05901 458 aa9.16□□□□□ -0.94
GTF3C2-202ENST00000359541 ARHGEF7Q14155 803 aa9.16□□□□□ -0.94
GTF3C2-202ENST00000359541 SKIV2LQ15477 1246 aaKnown RBP9.16□□□□□ -0.94
GTF3C2-202ENST00000359541 SETMARQ53H47 684 aaPredicted RBP9.16□□□□□ -0.94
GTF3C2-202ENST00000359541 CYP20A1Q6UW02 462 aa9.16□□□□□ -0.94
GTF3C2-202ENST00000359541 SPNS2Q8IVW8 549 aa9.16□□□□□ -0.94
GTF3C2-202ENST00000359541 SLC39A11Q8N1S5 342 aa9.16□□□□□ -0.94
GTF3C2-202ENST00000359541 CBR4Q8N4T8 237 aa9.16□□□□□ -0.94
GTF3C2-202ENST00000359541 FIBCD1Q8N539 461 aa9.16□□□□□ -0.94
GTF3C2-202ENST00000359541 OR2AP1Q8NGE2 309 aa9.16□□□□□ -0.94
GTF3C2-202ENST00000359541 MAGEB10Q96LZ2 347 aaPredicted RBP9.16□□□□□ -0.94
GTF3C2-202ENST00000359541 UGT2B28Q9BY64 529 aa9.16□□□□□ -0.94
GTF3C2-202ENST00000359541 CD320Q9NPF0 282 aa9.16□□□□□ -0.94
GTF3C2-202ENST00000359541 CHCHD3Q9NX63 227 aaKnown RBP9.16□□□□□ -0.94
GTF3C2-202ENST00000359541 PKD2L2Q9NZM6 624 aa9.16□□□□□ -0.94
GTF3C2-202ENST00000359541 CFAP97Q9P2B7 532 aa9.16□□□□□ -0.94
GTF3C2-202ENST00000359541 PRKAG2Q9UGJ0 569 aa9.16□□□□□ -0.94
GTF3C2-202ENST00000359541 ZMYM5Q9UJ78 669 aa9.16□□□□□ -0.94
GTF3C2-202ENST00000359541 TRIM17Q9Y577 477 aa9.16□□□□□ -0.94
GTF3C2-202ENST00000359541 PRDX3P30048 256 aaKnown RBP9.16□□□□□ -0.94
GTF3C2-202ENST00000359541 TPD52P55327 224 aaPredicted RBP9.16□□□□□ -0.94
GTF3C2-202ENST00000359541 ERVPABLB-1P60509 514 aa9.16□□□□□ -0.94
GTF3C2-202ENST00000359541 RPL38P63173 70 aaKnown RBP9.16□□□□□ -0.94
GTF3C2-202ENST00000359541 CDKL1Q00532 357 aa9.16□□□□□ -0.94
GTF3C2-202ENST00000359541 MYO7AQ13402 2215 aa9.16□□□□□ -0.94
GTF3C2-202ENST00000359541 CHERPQ8IWX8 916 aaKnown RBP9.16□□□□□ -0.94
GTF3C2-202ENST00000359541 CPXM2Q8N436 756 aa9.16□□□□□ -0.94
GTF3C2-202ENST00000359541 OR52B6Q8NGF0 335 aa9.16□□□□□ -0.94
GTF3C2-202ENST00000359541 CYGBQ8WWM9 190 aa9.16□□□□□ -0.94
GTF3C2-202ENST00000359541 NMD3Q96D46 503 aaKnown RBP9.16□□□□□ -0.94
GTF3C2-202ENST00000359541 DEFB118Q96PH6 123 aa9.16□□□□□ -0.94
GTF3C2-202ENST00000359541 PLEKHG4BQ96PX9 1271 aa9.16□□□□□ -0.94
GTF3C2-202ENST00000359541 ACTR8Q9H981 624 aa9.16□□□□□ -0.94
GTF3C2-202ENST00000359541 KLQ9UEF7 1012 aa9.16□□□□□ -0.94
GTF3C2-202ENST00000359541 PCDHA9Q9Y5H5 950 aa9.16□□□□□ -0.94
GTF3C2-202ENST00000359541 EFCAB14O75071 495 aa9.16□□□□□ -0.94
GTF3C2-202ENST00000359541 ZNF23P17027 643 aa9.16□□□□□ -0.94
GTF3C2-202ENST00000359541 CKMT2P17540 419 aa9.16□□□□□ -0.94
GTF3C2-202ENST00000359541 RFC2P35250 354 aa9.16□□□□□ -0.94
GTF3C2-202ENST00000359541 GNPDA1P46926 289 aa9.16□□□□□ -0.94
GTF3C2-202ENST00000359541 POLR2LP62875 67 aaKnown RBP9.16□□□□□ -0.94
GTF3C2-202ENST00000359541 TUBA4AP68366 448 aa9.16□□□□□ -0.94
GTF3C2-202ENST00000359541 TXNDC8Q6A555 127 aa9.16□□□□□ -0.94
GTF3C2-202ENST00000359541 PTRH1Q86Y79 214 aaKnown RBP9.16□□□□□ -0.94
GTF3C2-202ENST00000359541 DHRSXQ8N5I4 330 aa9.16□□□□□ -0.94
GTF3C2-202ENST00000359541 DCBLD1Q8N8Z6 715 aa9.16□□□□□ -0.94
GTF3C2-202ENST00000359541 DNAJB8Q8NHS0 232 aa9.16□□□□□ -0.94
GTF3C2-202ENST00000359541 ITFG1Q8TB96 612 aa9.16□□□□□ -0.94
GTF3C2-202ENST00000359541 PIH1D2Q8WWB5 315 aa9.16□□□□□ -0.94
GTF3C2-202ENST00000359541 VPS50Q96JG6 964 aa9.16□□□□□ -0.94
GTF3C2-202ENST00000359541 CDK15Q96Q40 435 aa9.16□□□□□ -0.94
GTF3C2-202ENST00000359541 SMIM14Q96QK8 99 aa9.16□□□□□ -0.94
GTF3C2-202ENST00000359541 ANKRD60Q9BZ19 345 aa9.16□□□□□ -0.94
GTF3C2-202ENST00000359541 RMND5AQ9H871 391 aa9.16□□□□□ -0.94
GTF3C2-202ENST00000359541 ABCB8Q9NUT2 735 aa9.16□□□□□ -0.94
GTF3C2-202ENST00000359541 IKZF3Q9UKT9 509 aa9.16□□□□□ -0.94
GTF3C2-202ENST00000359541 EIF3FO00303 357 aaPredicted RBP9.15□□□□□ -0.94
GTF3C2-202ENST00000359541 KPNA5O15131 536 aa9.15□□□□□ -0.94
GTF3C2-202ENST00000359541 STK16O75716 305 aa9.15□□□□□ -0.94
GTF3C2-202ENST00000359541 CNPP09543 421 aaKnown RBP9.15□□□□□ -0.94
GTF3C2-202ENST00000359541 EBLN1P0CF75 366 aa9.15□□□□□ -0.94
GTF3C2-202ENST00000359541 VARSP26640 1264 aaKnown RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms