RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 ZNF730Q6ZMV8 503 aa11.6□□□□□ -0.55
COL9A1-202ENST00000357250 DPEP3Q9H4B8 488 aa11.6□□□□□ -0.55
COL9A1-202ENST00000357250 OXSMQ9NWU1 459 aa11.6□□□□□ -0.55
COL9A1-202ENST00000357250 PRORSD1PA6NEY8 169 aa11.59□□□□□ -0.55
COL9A1-202ENST00000357250 MAGEB17A8MXT2 336 aa11.59□□□□□ -0.55
COL9A1-202ENST00000357250 SLC30A4O14863 429 aa11.59□□□□□ -0.55
COL9A1-202ENST00000357250 TEX28O15482 410 aa11.59□□□□□ -0.55
COL9A1-202ENST00000357250 IFI44LQ53G44 452 aa11.59□□□□□ -0.55
COL9A1-202ENST00000357250 ATXN7L2Q5T6C5 722 aaPredicted RBP11.59□□□□□ -0.55
COL9A1-202ENST00000357250 PIK3R6Q5UE93 754 aa11.59□□□□□ -0.55
COL9A1-202ENST00000357250 SNX20Q7Z614 316 aa11.59□□□□□ -0.55
COL9A1-202ENST00000357250 PYROXD2Q8N2H3 581 aa11.59□□□□□ -0.55
COL9A1-202ENST00000357250 SLC43A3Q8NBI5 491 aa11.59□□□□□ -0.55
COL9A1-202ENST00000357250 RAB2BQ8WUD1 216 aa11.59□□□□□ -0.55
COL9A1-202ENST00000357250 AZIN2Q96A70 460 aa11.59□□□□□ -0.55
COL9A1-202ENST00000357250 LRRC3Q9BY71 257 aa11.59□□□□□ -0.55
COL9A1-202ENST00000357250 PHF11Q9UIL8 331 aa11.59□□□□□ -0.55
COL9A1-202ENST00000357250 SNX7Q9UNH6 387 aa11.59□□□□□ -0.55
COL9A1-202ENST00000357250 SH3GLB1Q9Y371 365 aa11.59□□□□□ -0.55
COL9A1-202ENST00000357250 YJEFN3A6XGL0 299 aa11.59□□□□□ -0.55
COL9A1-202ENST00000357250 PIP5K1BO14986 540 aa11.59□□□□□ -0.55
COL9A1-202ENST00000357250 OR4F21O95013 312 aa11.59□□□□□ -0.55
COL9A1-202ENST00000357250 MAPK12P53778 367 aa11.59□□□□□ -0.55
COL9A1-202ENST00000357250 HERVK_113P63132 956 aa11.59□□□□□ -0.55
COL9A1-202ENST00000357250 OR7D4Q8NG98 312 aa11.59□□□□□ -0.55
COL9A1-202ENST00000357250 NAT14Q8WUY8 206 aa11.59□□□□□ -0.55
COL9A1-202ENST00000357250 IPCEF1Q8WWN9 437 aaPredicted RBP11.59□□□□□ -0.55
COL9A1-202ENST00000357250 ERVK-6Q9BXR3 956 aa11.59□□□□□ -0.55
COL9A1-202ENST00000357250 PDE10AQ9Y233 779 aa11.59□□□□□ -0.55
COL9A1-202ENST00000357250 K7EPI3 171 aa11.59□□□□□ -0.55
COL9A1-202ENST00000357250 S100GP29377 79 aa11.59□□□□□ -0.55
COL9A1-202ENST00000357250 STXBP1P61764 594 aaKnown RBP11.59□□□□□ -0.55
COL9A1-202ENST00000357250 SF1Q15637 639 aaKnown RBP11.59□□□□□ -0.55
COL9A1-202ENST00000357250 KCNA10Q16322 511 aa11.59□□□□□ -0.55
COL9A1-202ENST00000357250 TNFAIP8L3Q5GJ75 292 aa11.59□□□□□ -0.55
COL9A1-202ENST00000357250 P2RY8Q86VZ1 359 aa11.59□□□□□ -0.55
COL9A1-202ENST00000357250 RELL1Q8IUW5 271 aa11.59□□□□□ -0.55
COL9A1-202ENST00000357250 GPR135Q8IZ08 494 aa11.59□□□□□ -0.55
COL9A1-202ENST00000357250 TRPV1Q8NER1 839 aa11.59□□□□□ -0.55
COL9A1-202ENST00000357250 TTLQ8NG68 377 aa11.59□□□□□ -0.55
COL9A1-202ENST00000357250 C1GALT1C1Q96EU7 318 aa11.59□□□□□ -0.55
COL9A1-202ENST00000357250 C8orf48Q96LL4 319 aa11.59□□□□□ -0.55
COL9A1-202ENST00000357250 MIPEPQ99797 713 aa11.59□□□□□ -0.55
COL9A1-202ENST00000357250 BCO2Q9BYV7 579 aa11.59□□□□□ -0.55
COL9A1-202ENST00000357250 GPR88Q9GZN0 384 aa11.59□□□□□ -0.55
COL9A1-202ENST00000357250 NMUR1Q9HB89 426 aa11.59□□□□□ -0.55
COL9A1-202ENST00000357250 SDK1Q7Z5N4 2213 aa11.59□□□□□ -0.55
COL9A1-202ENST00000357250 ANXA8P13928 327 aa11.59□□□□□ -0.55
COL9A1-202ENST00000357250 RGS8P57771 180 aaPredicted RBP11.59□□□□□ -0.55
COL9A1-202ENST00000357250 SNAPC1Q16533 368 aa11.59□□□□□ -0.55
COL9A1-202ENST00000357250 KHDC1Q4VXA5 237 aaKnown RBP11.59□□□□□ -0.55
COL9A1-202ENST00000357250 CLEC6AQ6EIG7 209 aa11.59□□□□□ -0.55
COL9A1-202ENST00000357250 MSANTD2Q6P1R3 559 aa11.59□□□□□ -0.55
COL9A1-202ENST00000357250 TIFABQ6ZNK6 161 aa11.59□□□□□ -0.55
COL9A1-202ENST00000357250 ZNF554Q86TJ5 538 aa11.59□□□□□ -0.55
COL9A1-202ENST00000357250 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.59□□□□□ -0.55
COL9A1-202ENST00000357250 FAM98AQ8NCA5 519 aaKnown RBP11.59□□□□□ -0.55
COL9A1-202ENST00000357250 OR5K1Q8NHB7 308 aa11.59□□□□□ -0.55
COL9A1-202ENST00000357250 PSMG2Q969U7 264 aa11.59□□□□□ -0.55
COL9A1-202ENST00000357250 NSMCE3Q96MG7 304 aa11.59□□□□□ -0.55
COL9A1-202ENST00000357250 C1orf21Q9H246 121 aa11.59□□□□□ -0.55
COL9A1-202ENST00000357250 PLK2Q9NYY3 685 aa11.59□□□□□ -0.55
COL9A1-202ENST00000357250 ILVBLA1L0T0 632 aa11.58□□□□□ -0.56
COL9A1-202ENST00000357250 SLC38A8A6NNN8 435 aa11.58□□□□□ -0.56
COL9A1-202ENST00000357250 CXCR6O00574 342 aa11.58□□□□□ -0.56
COL9A1-202ENST00000357250 CLDN4O14493 209 aa11.58□□□□□ -0.56
COL9A1-202ENST00000357250 MT-CYBP00156 380 aaPredicted RBP11.58□□□□□ -0.56
COL9A1-202ENST00000357250 PTPN2P17706 415 aa11.58□□□□□ -0.56
COL9A1-202ENST00000357250 GDF10P55107 478 aa11.58□□□□□ -0.56
COL9A1-202ENST00000357250 AP1S2P56377 157 aa11.58□□□□□ -0.56
COL9A1-202ENST00000357250 WDR4P57081 412 aaKnown RBP11.58□□□□□ -0.56
COL9A1-202ENST00000357250 CYP4F2P78329 520 aa11.58□□□□□ -0.56
COL9A1-202ENST00000357250 CYP4F3Q08477 520 aa11.58□□□□□ -0.56
COL9A1-202ENST00000357250 SOWAHAQ2M3V2 549 aa11.58□□□□□ -0.56
COL9A1-202ENST00000357250 C5orf22Q49AR2 442 aa11.58□□□□□ -0.56
COL9A1-202ENST00000357250 RALGPS2Q86X27 583 aaPredicted RBP11.58□□□□□ -0.56
COL9A1-202ENST00000357250 GALNT13Q8IUC8 556 aa11.58□□□□□ -0.56
COL9A1-202ENST00000357250 OR6K2Q8NGY2 324 aa11.58□□□□□ -0.56
COL9A1-202ENST00000357250 PIGXQ8TBF5 258 aa11.58□□□□□ -0.56
COL9A1-202ENST00000357250 XAGE5Q8WWM1 108 aa11.58□□□□□ -0.56
COL9A1-202ENST00000357250 FAM210AQ96ND0 272 aa11.58□□□□□ -0.56
COL9A1-202ENST00000357250 CXorf21Q9HAI6 301 aa11.58□□□□□ -0.56
COL9A1-202ENST00000357250 GPN1Q9HCN4 374 aaPredicted RBP11.58□□□□□ -0.56
COL9A1-202ENST00000357250 ITM2CQ9NQX7 267 aa11.58□□□□□ -0.56
COL9A1-202ENST00000357250 HEBP2Q9Y5Z4 205 aa11.58□□□□□ -0.56
COL9A1-202ENST00000357250 TAF1P21675 1872 aa11.58□□□□□ -0.56
COL9A1-202ENST00000357250 TBC1D3DA0A087WVF3 549 aa11.58□□□□□ -0.56
COL9A1-202ENST00000357250 TBC1D3IA0A087WXS9 549 aa11.58□□□□□ -0.56
COL9A1-202ENST00000357250 TBC1D3EA0A087X179 549 aa11.58□□□□□ -0.56
COL9A1-202ENST00000357250 TBC1D3KA0A087X1G2 549 aa11.58□□□□□ -0.56
COL9A1-202ENST00000357250 TBC1D3FA6NER0 549 aaPredicted RBP11.58□□□□□ -0.56
COL9A1-202ENST00000357250 ARHGEF33A8MVX0 844 aa11.58□□□□□ -0.56
COL9A1-202ENST00000357250 TBC1D3LB9A6J9 549 aa11.58□□□□□ -0.56
COL9A1-202ENST00000357250 MCIDASD6RGH6 385 aa11.58□□□□□ -0.56
COL9A1-202ENST00000357250 CCNB2O95067 398 aa11.58□□□□□ -0.56
COL9A1-202ENST00000357250 TBC1D3HP0C7X1 549 aa11.58□□□□□ -0.56
COL9A1-202ENST00000357250 ZNF12P17014 697 aa11.58□□□□□ -0.56
COL9A1-202ENST00000357250 SLC1A2P43004 574 aa11.58□□□□□ -0.56
COL9A1-202ENST00000357250 GAD2Q05329 585 aa11.58□□□□□ -0.56
COL9A1-202ENST00000357250 VWA5B1Q5TIE3 1220 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms