RNA–Protein interactions for RNA: ENST00000356090.8

NCDN-201, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,433 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-201ENST00000356090 IPPKQ9H8X2 491 aa13.17□□□□□ -0.3
NCDN-201ENST00000356090 GNPTGQ9UJJ9 305 aa13.17□□□□□ -0.3
NCDN-201ENST00000356090 PCTPQ9UKL6 214 aa13.17□□□□□ -0.3
NCDN-201ENST00000356090 CDH7Q9ULB5 785 aa13.17□□□□□ -0.3
NCDN-201ENST00000356090 A8MU76 341 aa13.16□□□□□ -0.3
NCDN-201ENST00000356090 COQ9O75208 318 aa13.16□□□□□ -0.3
NCDN-201ENST00000356090 NDUFS2O75306 463 aa13.16□□□□□ -0.3
NCDN-201ENST00000356090 PAX3P23760 479 aa13.16□□□□□ -0.3
NCDN-201ENST00000356090 HTR1BP28222 390 aa13.16□□□□□ -0.3
NCDN-201ENST00000356090 TRIP4Q15650 581 aaPredicted RBP13.16□□□□□ -0.3
NCDN-201ENST00000356090 SPANXN4Q5MJ08 99 aa13.16□□□□□ -0.3
NCDN-201ENST00000356090 NKAPQ8N5F7 415 aaKnown RBP13.16□□□□□ -0.3
NCDN-201ENST00000356090 OR4F6Q8NGB9 312 aa13.16□□□□□ -0.3
NCDN-201ENST00000356090 MCOLN3Q8TDD5 553 aa13.16□□□□□ -0.3
NCDN-201ENST00000356090 MIR1-1HGQ9H1L0 117 aa13.16□□□□□ -0.3
NCDN-201ENST00000356090 PRDM8Q9NQV8 689 aa13.16□□□□□ -0.3
NCDN-201ENST00000356090 WWOXQ9NZC7 414 aa13.16□□□□□ -0.3
NCDN-201ENST00000356090 TMEM9Q9P0T7 183 aa13.16□□□□□ -0.3
NCDN-201ENST00000356090 KIF17Q9P2E2 1029 aa13.16□□□□□ -0.3
NCDN-201ENST00000356090 ZNF225Q9UK10 706 aa13.16□□□□□ -0.3
NCDN-201ENST00000356090 ERGIC3Q9Y282 383 aa13.16□□□□□ -0.3
NCDN-201ENST00000356090 RBM47A0AV96 593 aaKnown RBP13.16□□□□□ -0.3
NCDN-201ENST00000356090 KRBA1A5PL33 1030 aa13.16□□□□□ -0.3
NCDN-201ENST00000356090 SH3BGRLO75368 114 aa13.16□□□□□ -0.3
NCDN-201ENST00000356090 SERPINB7O75635 380 aa13.16□□□□□ -0.3
NCDN-201ENST00000356090 CAPN15O75808 1086 aa13.16□□□□□ -0.3
NCDN-201ENST00000356090 ANGPTL1O95841 491 aa13.16□□□□□ -0.3
NCDN-201ENST00000356090 ALPLP05186 524 aa13.16□□□□□ -0.3
NCDN-201ENST00000356090 CTPS1P17812 591 aa13.16□□□□□ -0.3
NCDN-201ENST00000356090 HTR1EP28566 365 aa13.16□□□□□ -0.3
NCDN-201ENST00000356090 SLC26A3P40879 764 aa13.16□□□□□ -0.3
NCDN-201ENST00000356090 PCYT1AP49585 367 aa13.16□□□□□ -0.3
NCDN-201ENST00000356090 CLK1P49759 484 aaKnown RBP13.16□□□□□ -0.3
NCDN-201ENST00000356090 NFKB2Q00653 900 aa13.16□□□□□ -0.3
NCDN-201ENST00000356090 EMX2Q04743 252 aa13.16□□□□□ -0.3
NCDN-201ENST00000356090 TRIM32Q13049 653 aa13.16□□□□□ -0.3
NCDN-201ENST00000356090 PRR23BQ6ZRT6 265 aa13.16□□□□□ -0.3
NCDN-201ENST00000356090 C16orf59Q7L2K0 433 aa13.16□□□□□ -0.3
NCDN-201ENST00000356090 MON1AQ86VX9 555 aa13.16□□□□□ -0.3
NCDN-201ENST00000356090 LRRC49Q8IUZ0 686 aa13.16□□□□□ -0.3
NCDN-201ENST00000356090 CCDC117Q8IWD4 279 aaPredicted RBP13.16□□□□□ -0.3
NCDN-201ENST00000356090 KRTCAP2Q8N6L1 136 aa13.16□□□□□ -0.3
NCDN-201ENST00000356090 OR6K2Q8NGY2 324 aa13.16□□□□□ -0.3
NCDN-201ENST00000356090 ZFP90Q8TF47 636 aa13.16□□□□□ -0.3
NCDN-201ENST00000356090 NTN4Q9HB63 628 aa13.16□□□□□ -0.3
NCDN-201ENST00000356090 C3orf18Q9UK00 162 aa13.16□□□□□ -0.3
NCDN-201ENST00000356090 VPS4AQ9UN37 437 aa13.16□□□□□ -0.3
NCDN-201ENST00000356090 TRPV2Q9Y5S1 764 aa13.16□□□□□ -0.3
NCDN-201ENST00000356090 PAPPA2Q9BXP8 1791 aa13.16□□□□□ -0.3
NCDN-201ENST00000356090 LCHNA4D1U4 455 aa13.16□□□□□ -0.3
NCDN-201ENST00000356090 NDST3O95803 873 aa13.16□□□□□ -0.3
NCDN-201ENST00000356090 EFNA1P20827 205 aaPredicted RBP13.16□□□□□ -0.3
NCDN-201ENST00000356090 KCNQ1P51787 676 aa13.16□□□□□ -0.3
NCDN-201ENST00000356090 ABRAXAS2Q15018 415 aa13.16□□□□□ -0.3
NCDN-201ENST00000356090 SKIV2LQ15477 1246 aaKnown RBP13.16□□□□□ -0.3
NCDN-201ENST00000356090 CPSF6Q16630 551 aaKnown RBP eCLIP13.16□□□□□ -0.3
NCDN-201ENST00000356090 MANEALQ5VSG8 457 aa13.16□□□□□ -0.3
NCDN-201ENST00000356090 PAGE2Q7Z2X7 111 aa13.16□□□□□ -0.3
NCDN-201ENST00000356090 UMODL1-AS1Q8N2C9 162 aa13.16□□□□□ -0.3
NCDN-201ENST00000356090 LEMD2Q8NC56 503 aa13.16□□□□□ -0.3
NCDN-201ENST00000356090 RHEBL1Q8TAI7 183 aa13.16□□□□□ -0.3
NCDN-201ENST00000356090 PNPT1Q8TCS8 783 aaKnown RBP13.16□□□□□ -0.3
NCDN-201ENST00000356090 TRUB1Q8WWH5 349 aaKnown RBP13.16□□□□□ -0.3
NCDN-201ENST00000356090 OR52E6Q96RD3 313 aa13.16□□□□□ -0.3
NCDN-201ENST00000356090 GPR63Q9BZJ6 419 aa13.16□□□□□ -0.3
NCDN-201ENST00000356090 NSUN3Q9H649 340 aaKnown RBP13.16□□□□□ -0.3
NCDN-201ENST00000356090 AMBNQ9NP70 447 aa13.16□□□□□ -0.3
NCDN-201ENST00000356090 SCUBE2Q9NQ36 999 aa13.16□□□□□ -0.3
NCDN-201ENST00000356090 PADI3Q9ULW8 664 aa13.16□□□□□ -0.3
NCDN-201ENST00000356090 EIF3LQ9Y262 564 aaKnown RBP13.16□□□□□ -0.3
NCDN-201ENST00000356090 SBF1O95248 1867 aa13.16□□□□□ -0.3
NCDN-201ENST00000356090 PEX11BO96011 259 aa13.15□□□□□ -0.3
NCDN-201ENST00000356090 RPL9P32969 192 aaKnown RBP13.15□□□□□ -0.3
NCDN-201ENST00000356090 TAF10Q12962 218 aa13.15□□□□□ -0.3
NCDN-201ENST00000356090 AQP6Q13520 282 aa13.15□□□□□ -0.3
NCDN-201ENST00000356090 ZNF846Q147U1 533 aa13.15□□□□□ -0.3
NCDN-201ENST00000356090 NIPAL1Q6NVV3 410 aa13.15□□□□□ -0.3
NCDN-201ENST00000356090 Q6ZSR9 355 aa13.15□□□□□ -0.3
NCDN-201ENST00000356090 KLHDC9Q8NEP7 349 aa13.15□□□□□ -0.3
NCDN-201ENST00000356090 SLC13A3Q8WWT9 602 aa13.15□□□□□ -0.3
NCDN-201ENST00000356090 TSSK3Q96PN8 268 aa13.15□□□□□ -0.3
NCDN-201ENST00000356090 DERL2Q9GZP9 239 aa13.15□□□□□ -0.3
NCDN-201ENST00000356090 MUC13Q9H3R2 512 aa13.15□□□□□ -0.3
NCDN-201ENST00000356090 LOC100130705A0A1B0GUX0 176 aa13.15□□□□□ -0.3
NCDN-201ENST00000356090 ELOVL7A1L3X0 281 aa13.15□□□□□ -0.3
NCDN-201ENST00000356090 F5H5T6 163 aa13.15□□□□□ -0.3
NCDN-201ENST00000356090 H0YAE9 185 aa13.15□□□□□ -0.3
NCDN-201ENST00000356090 CXCR6O00574 342 aa13.15□□□□□ -0.3
NCDN-201ENST00000356090 BCKDKO14874 412 aa13.15□□□□□ -0.3
NCDN-201ENST00000356090 SERPINA1P01009 418 aa13.15□□□□□ -0.3
NCDN-201ENST00000356090 PBX3P40426 434 aa13.15□□□□□ -0.3
NCDN-201ENST00000356090 RGRP47804 291 aa13.15□□□□□ -0.3
NCDN-201ENST00000356090 RPS24P62847 133 aaKnown RBP13.15□□□□□ -0.3
NCDN-201ENST00000356090 TIAL1Q01085 375 aaKnown RBP eCLIP13.15□□□□□ -0.3
NCDN-201ENST00000356090 SEMG2Q02383 582 aa13.15□□□□□ -0.3
NCDN-201ENST00000356090 CYP4F3Q08477 520 aa13.15□□□□□ -0.3
NCDN-201ENST00000356090 ARHGEF7Q14155 803 aa13.15□□□□□ -0.3
NCDN-201ENST00000356090 SLC14A2Q15849 920 aa13.15□□□□□ -0.3
NCDN-201ENST00000356090 AFTPHQ6ULP2 937 aa13.15□□□□□ -0.3
NCDN-201ENST00000356090 ZFAND4Q86XD8 727 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms