RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 AHSGP02765 367 aa15.52■□□□□ 0.08
RTN3-205ENST00000356000 HMGCRP04035 888 aa15.52■□□□□ 0.08
RTN3-205ENST00000356000 POLBP06746 335 aa15.52■□□□□ 0.08
RTN3-205ENST00000356000 CAPN3P20807 821 aa15.52■□□□□ 0.08
RTN3-205ENST00000356000 PER3P56645 1201 aa15.52■□□□□ 0.08
RTN3-205ENST00000356000 FKBP1BP68106 108 aa15.52■□□□□ 0.08
RTN3-205ENST00000356000 LIPEQ05469 1076 aa15.52■□□□□ 0.08
RTN3-205ENST00000356000 NOGQ13253 232 aa15.52■□□□□ 0.08
RTN3-205ENST00000356000 VPS26BQ4G0F5 336 aa15.52■□□□□ 0.08
RTN3-205ENST00000356000 SPANXN3Q5MJ09 141 aa15.52■□□□□ 0.08
RTN3-205ENST00000356000 TSTD2Q5T7W7 516 aa15.52■□□□□ 0.08
RTN3-205ENST00000356000 GPAT2Q6NUI2 795 aa15.52■□□□□ 0.08
RTN3-205ENST00000356000 CDKL3Q8IVW4 592 aaPredicted RBP15.52■□□□□ 0.08
RTN3-205ENST00000356000 BBS7Q8IWZ6 715 aa15.52■□□□□ 0.08
RTN3-205ENST00000356000 VWA5B2Q8N398 1253 aa15.52■□□□□ 0.08
RTN3-205ENST00000356000 FSTL5Q8N475 847 aaPredicted RBP15.52■□□□□ 0.08
RTN3-205ENST00000356000 UFD1Q92890 307 aa15.52■□□□□ 0.08
RTN3-205ENST00000356000 UROC1Q96N76 676 aa15.52■□□□□ 0.08
RTN3-205ENST00000356000 FRMD6Q96NE9 622 aa15.52■□□□□ 0.08
RTN3-205ENST00000356000 RBM4BQ9BQ04 359 aaKnown RBP15.52■□□□□ 0.08
RTN3-205ENST00000356000 RBM4Q9BWF3 364 aaKnown RBP15.52■□□□□ 0.08
RTN3-205ENST00000356000 OSBPL2Q9H1P3 480 aa15.52■□□□□ 0.08
RTN3-205ENST00000356000 SCN3BQ9NY72 215 aa15.52■□□□□ 0.08
RTN3-205ENST00000356000 TLK1Q9UKI8 766 aa15.52■□□□□ 0.08
RTN3-205ENST00000356000 TRHDEQ9UKU6 1024 aa15.52■□□□□ 0.08
RTN3-205ENST00000356000 PRELID3BQ9Y3B1 194 aa15.52■□□□□ 0.08
RTN3-205ENST00000356000 BTN3A3O00478 584 aa15.52■□□□□ 0.07
RTN3-205ENST00000356000 RGS10O43665 173 aa15.52■□□□□ 0.07
RTN3-205ENST00000356000 FZD6O60353 706 aa15.52■□□□□ 0.07
RTN3-205ENST00000356000 TULP3O75386 442 aa15.52■□□□□ 0.07
RTN3-205ENST00000356000 LCKP06239 509 aa15.52■□□□□ 0.07
RTN3-205ENST00000356000 F8A1P23610 371 aa15.52■□□□□ 0.07
RTN3-205ENST00000356000 HRH2P25021 359 aa15.52■□□□□ 0.07
RTN3-205ENST00000356000 FMO3P31513 532 aa15.52■□□□□ 0.07
RTN3-205ENST00000356000 LIPAP38571 399 aa15.52■□□□□ 0.07
RTN3-205ENST00000356000 GLRBP48167 497 aa15.52■□□□□ 0.07
RTN3-205ENST00000356000 CENPAP49450 140 aa15.52■□□□□ 0.07
RTN3-205ENST00000356000 IL5RAQ01344 420 aa15.52■□□□□ 0.07
RTN3-205ENST00000356000 FAM209BQ5JX69 171 aa15.52■□□□□ 0.07
RTN3-205ENST00000356000 NOL9Q5SY16 702 aaKnown RBP15.52■□□□□ 0.07
RTN3-205ENST00000356000 CES3Q6UWW8 571 aa15.52■□□□□ 0.07
RTN3-205ENST00000356000 LARP4Q71RC2 724 aaKnown RBP eCLIP15.52■□□□□ 0.07
RTN3-205ENST00000356000 PIWIL4Q7Z3Z4 852 aaKnown RBP15.52■□□□□ 0.07
RTN3-205ENST00000356000 PROSER1Q86XN7 944 aa15.52■□□□□ 0.07
RTN3-205ENST00000356000 ACVR1CQ8NER5 493 aa15.52■□□□□ 0.07
RTN3-205ENST00000356000 WDR48Q8TAF3 677 aa15.52■□□□□ 0.07
RTN3-205ENST00000356000 UBASH3BQ8TF42 649 aa15.52■□□□□ 0.07
RTN3-205ENST00000356000 ST8SIA2Q92186 375 aa15.52■□□□□ 0.07
RTN3-205ENST00000356000 BBS2Q9BXC9 721 aa15.52■□□□□ 0.07
RTN3-205ENST00000356000 TRIM8Q9BZR9 551 aa15.52■□□□□ 0.07
RTN3-205ENST00000356000 MRM3Q9HC36 420 aaKnown RBP15.52■□□□□ 0.07
RTN3-205ENST00000356000 C3orf18Q9UK00 162 aa15.52■□□□□ 0.07
RTN3-205ENST00000356000 RNF6Q9Y252 685 aa15.52■□□□□ 0.07
RTN3-205ENST00000356000 MRPS7Q9Y2R9 242 aaKnown RBP15.52■□□□□ 0.07
RTN3-205ENST00000356000 MFHAS1Q9Y4C4 1052 aa15.52■□□□□ 0.07
RTN3-205ENST00000356000 B4DXG7 233 aa15.51■□□□□ 0.07
RTN3-205ENST00000356000 SPATA31C2B4DYI2 1134 aa15.51■□□□□ 0.07
RTN3-205ENST00000356000 OGTO15294 1046 aa15.51■□□□□ 0.07
RTN3-205ENST00000356000 TLL1O43897 1013 aa15.51■□□□□ 0.07
RTN3-205ENST00000356000 PROS1P07225 676 aa15.51■□□□□ 0.07
RTN3-205ENST00000356000 HOXD8P13378 290 aaPredicted RBP15.51■□□□□ 0.07
RTN3-205ENST00000356000 CA5AP35218 305 aa15.51■□□□□ 0.07
RTN3-205ENST00000356000 TRIM23P36406 574 aa15.51■□□□□ 0.07
RTN3-205ENST00000356000 MTHFRP42898 656 aa15.51■□□□□ 0.07
RTN3-205ENST00000356000 CTSKP43235 329 aa15.51■□□□□ 0.07
RTN3-205ENST00000356000 GBX2P52951 348 aaPredicted RBP15.51■□□□□ 0.07
RTN3-205ENST00000356000 CXCL9Q07325 125 aa15.51■□□□□ 0.07
RTN3-205ENST00000356000 HYAL2Q12891 473 aa15.51■□□□□ 0.07
RTN3-205ENST00000356000 ARMCX4Q5H9R4 360 aa15.51■□□□□ 0.07
RTN3-205ENST00000356000 SULT1C3Q6IMI6 304 aa15.51■□□□□ 0.07
RTN3-205ENST00000356000 TEX261Q6UWH6 196 aa15.51■□□□□ 0.07
RTN3-205ENST00000356000 B3GNT9Q6UX72 402 aa15.51■□□□□ 0.07
RTN3-205ENST00000356000 OR8H3Q8N146 312 aa15.51■□□□□ 0.07
RTN3-205ENST00000356000 ZNF366Q8N895 744 aa15.51■□□□□ 0.07
RTN3-205ENST00000356000 OR8K3Q8NH51 312 aa15.51■□□□□ 0.07
RTN3-205ENST00000356000 WDR11Q9BZH6 1224 aa15.51■□□□□ 0.07
RTN3-205ENST00000356000 SLC22A4Q9H015 551 aa15.51■□□□□ 0.07
RTN3-205ENST00000356000 SP110Q9HB58 689 aa15.51■□□□□ 0.07
RTN3-205ENST00000356000 SNX8Q9Y5X2 465 aa15.51■□□□□ 0.07
RTN3-205ENST00000356000 U3KQ87 197 aa15.51■□□□□ 0.07
RTN3-205ENST00000356000 F7P08709 466 aaPredicted RBP15.51■□□□□ 0.07
RTN3-205ENST00000356000 HNRNPLP14866 589 aaKnown RBP eCLIP15.51■□□□□ 0.072e-12■■■□□ 15.2
RTN3-205ENST00000356000 GADD45AP24522 165 aa15.51■□□□□ 0.07
RTN3-205ENST00000356000 TRIM48Q8IWZ4 208 aa15.51■□□□□ 0.07
RTN3-205ENST00000356000 TMEM161BQ8NDZ6 487 aa15.51■□□□□ 0.07
RTN3-205ENST00000356000 RAET1EQ8TD07 263 aa15.51■□□□□ 0.07
RTN3-205ENST00000356000 TRMT61AQ96FX7 289 aaKnown RBP15.51■□□□□ 0.07
RTN3-205ENST00000356000 RNF121Q9H920 327 aa15.51■□□□□ 0.07
RTN3-205ENST00000356000 CCNB1IP1Q9NPC3 277 aa15.51■□□□□ 0.07
RTN3-205ENST00000356000 PIH1D1Q9NWS0 290 aaKnown RBP15.51■□□□□ 0.07
RTN3-205ENST00000356000 RUVBL2Q9Y230 463 aaKnown RBP15.51■□□□□ 0.07
RTN3-205ENST00000356000 RAP2AP10114 183 aa15.5■□□□□ 0.07
RTN3-205ENST00000356000 YWHAQP27348 245 aa15.5■□□□□ 0.07
RTN3-205ENST00000356000 PTPN5P54829 565 aa15.5■□□□□ 0.07
RTN3-205ENST00000356000 AP1S2P56377 157 aa15.5■□□□□ 0.07
RTN3-205ENST00000356000 RAPSNQ13702 412 aa15.5■□□□□ 0.07
RTN3-205ENST00000356000 SYT16Q17RD7 645 aa15.5■□□□□ 0.07
RTN3-205ENST00000356000 ANKRD34AQ69YU3 496 aa15.5■□□□□ 0.07
RTN3-205ENST00000356000 LAIR1Q6GTX8 287 aa15.5■□□□□ 0.07
RTN3-205ENST00000356000 RETSATQ6NUM9 610 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms