RNA–Protein interactions for RNA: ENST00000355765.10

PRPF39-201, Transcript of pre-mRNA processing factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF39, Length 2,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-201ENST00000355765 TGFBR2P37173 567 aa18.63■□□□□ 0.57
PRPF39-201ENST00000355765 PRKG2Q13237 762 aa18.63■□□□□ 0.57
PRPF39-201ENST00000355765 KYAT1Q16773 422 aa18.63■□□□□ 0.57
PRPF39-201ENST00000355765 NEK10Q6ZWH5 1172 aa18.63■□□□□ 0.57
PRPF39-201ENST00000355765 DET1Q7L5Y6 550 aa18.63■□□□□ 0.57
PRPF39-201ENST00000355765 PRSS48Q7RTY5 328 aa18.63■□□□□ 0.57
PRPF39-201ENST00000355765 ZFAND4Q86XD8 727 aa18.63■□□□□ 0.57
PRPF39-201ENST00000355765 SVOPLQ8N434 492 aa18.63■□□□□ 0.57
PRPF39-201ENST00000355765 FBXO39Q8N4B4 442 aa18.63■□□□□ 0.57
PRPF39-201ENST00000355765 PARP16Q8N5Y8 322 aa18.63■□□□□ 0.57
PRPF39-201ENST00000355765 CHST13Q8NET6 341 aa18.63■□□□□ 0.57
PRPF39-201ENST00000355765 UBE2FQ969M7 185 aa18.63■□□□□ 0.57
PRPF39-201ENST00000355765 TMEM209Q96SK2 561 aa18.63■□□□□ 0.57
PRPF39-201ENST00000355765 SLC39A8Q9C0K1 460 aa18.63■□□□□ 0.57
PRPF39-201ENST00000355765 RASSF1Q9NS23 344 aa18.63■□□□□ 0.57
PRPF39-201ENST00000355765 QPCTLQ9NXS2 382 aa18.63■□□□□ 0.57
PRPF39-201ENST00000355765 HOXC10Q9NYD6 342 aa18.63■□□□□ 0.57
PRPF39-201ENST00000355765 VAPAQ9P0L0 249 aa18.63■□□□□ 0.57
PRPF39-201ENST00000355765 ZNF225Q9UK10 706 aa18.63■□□□□ 0.57
PRPF39-201ENST00000355765 IKZF3Q9UKT9 509 aa18.63■□□□□ 0.57
PRPF39-201ENST00000355765 CARD8Q9Y2G2 431 aa18.63■□□□□ 0.57
PRPF39-201ENST00000355765 TPRKBQ9Y3C4 175 aa18.63■□□□□ 0.57
PRPF39-201ENST00000355765 MAFKO60675 156 aa18.62■□□□□ 0.57
PRPF39-201ENST00000355765 FAM20BO75063 409 aa18.62■□□□□ 0.57
PRPF39-201ENST00000355765 RYKP34925 604 aa18.62■□□□□ 0.57
PRPF39-201ENST00000355765 DAOAP59103 153 aa18.62■□□□□ 0.57
PRPF39-201ENST00000355765 TIAL1Q01085 375 aaKnown RBP eCLIP18.62■□□□□ 0.579e-7■■■■□ 23.8
PRPF39-201ENST00000355765 ITKQ08881 620 aa18.62■□□□□ 0.57
PRPF39-201ENST00000355765 RBBP7Q16576 425 aa18.62■□□□□ 0.57
PRPF39-201ENST00000355765 TPRG1LQ5T0D9 272 aa18.62■□□□□ 0.57
PRPF39-201ENST00000355765 AGAP6Q5VW22 663 aa18.62■□□□□ 0.57
PRPF39-201ENST00000355765 KLHDC8BQ8IXV7 354 aa18.62■□□□□ 0.57
PRPF39-201ENST00000355765 IL17RDQ8NFM7 739 aa18.62■□□□□ 0.57
PRPF39-201ENST00000355765 ZNF560Q96MR9 790 aa18.62■□□□□ 0.57
PRPF39-201ENST00000355765 AGAP4Q96P64 663 aa18.62■□□□□ 0.57
PRPF39-201ENST00000355765 CDK15Q96Q40 435 aa18.62■□□□□ 0.57
PRPF39-201ENST00000355765 ATOH8Q96SQ7 321 aa18.62■□□□□ 0.57
PRPF39-201ENST00000355765 BRINP2Q9C0B6 783 aa18.62■□□□□ 0.57
PRPF39-201ENST00000355765 NXF3Q9H4D5 531 aaKnown RBP18.62■□□□□ 0.57
PRPF39-201ENST00000355765 IKZF5Q9H5V7 419 aa18.62■□□□□ 0.57
PRPF39-201ENST00000355765 RNF167Q9H6Y7 350 aa18.62■□□□□ 0.57
PRPF39-201ENST00000355765 SNX6Q9UNH7 406 aa18.62■□□□□ 0.57
PRPF39-201ENST00000355765 BRCA1P38398 1863 aaKnown RBP18.62■□□□□ 0.57
PRPF39-201ENST00000355765 TSC2P49815 1807 aa18.62■□□□□ 0.57
PRPF39-201ENST00000355765 METTL15A6NJ78 407 aa18.62■□□□□ 0.57
PRPF39-201ENST00000355765 CENPBD1B2RD01 187 aa18.62■□□□□ 0.57
PRPF39-201ENST00000355765 NFKBIEO00221 500 aa18.62■□□□□ 0.57
PRPF39-201ENST00000355765 SCO2O43819 266 aa18.62■□□□□ 0.57
PRPF39-201ENST00000355765 VPS4BO75351 444 aa18.62■□□□□ 0.57
PRPF39-201ENST00000355765 DNTTP04053 509 aa18.62■□□□□ 0.57
PRPF39-201ENST00000355765 IGFBP6P24592 240 aaPredicted RBP18.62■□□□□ 0.57
PRPF39-201ENST00000355765 CCNCP24863 283 aa18.62■□□□□ 0.57
PRPF39-201ENST00000355765 GGT5P36269 586 aa18.62■□□□□ 0.57
PRPF39-201ENST00000355765 SLX4IPQ5VYV7 408 aa18.62■□□□□ 0.57
PRPF39-201ENST00000355765 TTC23LQ6PF05 361 aa18.62■□□□□ 0.57
PRPF39-201ENST00000355765 REM2Q8IYK8 340 aaPredicted RBP18.62■□□□□ 0.57
PRPF39-201ENST00000355765 BEND7Q8N7W2 519 aaPredicted RBP18.62■□□□□ 0.57
PRPF39-201ENST00000355765 OR6F1Q8NGZ6 308 aa18.62■□□□□ 0.57
PRPF39-201ENST00000355765 TNIP3Q96KP6 325 aa18.62■□□□□ 0.57
PRPF39-201ENST00000355765 DUSP21Q9H596 190 aa18.62■□□□□ 0.57
PRPF39-201ENST00000355765 SCN3BQ9NY72 215 aa18.62■□□□□ 0.57
PRPF39-201ENST00000355765 VNN3Q9NY84 501 aa18.62■□□□□ 0.57
PRPF39-201ENST00000355765 SAGE2PA6NJ88 616 aa18.61■□□□□ 0.57
PRPF39-201ENST00000355765 RGS10O43665 173 aa18.61■□□□□ 0.57
PRPF39-201ENST00000355765 GRIK1P39086 918 aa18.61■□□□□ 0.57
PRPF39-201ENST00000355765 ERVK-8P63133 956 aa18.61■□□□□ 0.57
PRPF39-201ENST00000355765 NRG1Q02297 640 aaPredicted RBP18.61■□□□□ 0.57
PRPF39-201ENST00000355765 SOWAHCQ53LP3 525 aaPredicted RBP18.61■□□□□ 0.57
PRPF39-201ENST00000355765 C6orf136Q5SQH8 315 aa18.61■□□□□ 0.57
PRPF39-201ENST00000355765 NXNL2Q5VZ03 156 aa18.61■□□□□ 0.57
PRPF39-201ENST00000355765 AHSA2Q719I0 299 aa18.61■□□□□ 0.57
PRPF39-201ENST00000355765 CDYL2Q8N8U2 506 aa18.61■□□□□ 0.57
PRPF39-201ENST00000355765 OR5K1Q8NHB7 308 aa18.61■□□□□ 0.57
PRPF39-201ENST00000355765 CYP2S1Q96SQ9 504 aa18.61■□□□□ 0.57
PRPF39-201ENST00000355765 RNF112Q9ULX5 631 aa18.61■□□□□ 0.57
PRPF39-201ENST00000355765 HOXD8P13378 290 aaPredicted RBP18.61■□□□□ 0.57
PRPF39-201ENST00000355765 IGFBP5P24593 272 aa18.61■□□□□ 0.57
PRPF39-201ENST00000355765 LIPAP38571 399 aa18.61■□□□□ 0.57
PRPF39-201ENST00000355765 OR2B6P58173 313 aa18.61■□□□□ 0.57
PRPF39-201ENST00000355765 GBX1Q14549 363 aa18.61■□□□□ 0.57
PRPF39-201ENST00000355765 ZBTB6Q15916 424 aa18.61■□□□□ 0.57
PRPF39-201ENST00000355765 ZNF566Q969W8 418 aa18.61■□□□□ 0.57
PRPF39-201ENST00000355765 RHBDF1Q96CC6 855 aa18.61■□□□□ 0.57
PRPF39-201ENST00000355765 ZFYVE19Q96K21 471 aa18.61■□□□□ 0.57
PRPF39-201ENST00000355765 DEPDC7Q96QD5 511 aa18.61■□□□□ 0.57
PRPF39-201ENST00000355765 TMEM246Q9BRR3 403 aa18.61■□□□□ 0.57
PRPF39-201ENST00000355765 CNGB3Q9NQW8 809 aa18.61■□□□□ 0.57
PRPF39-201ENST00000355765 PDGFCQ9NRA1 345 aa18.61■□□□□ 0.57
PRPF39-201ENST00000355765 TRMT13Q9NUP7 481 aaKnown RBP18.61■□□□□ 0.57
PRPF39-201ENST00000355765 TMEM30AQ9NV96 361 aa18.61■□□□□ 0.57
PRPF39-201ENST00000355765 C14orf119Q9NWQ9 140 aa18.61■□□□□ 0.57
PRPF39-201ENST00000355765 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.61■□□□□ 0.57
PRPF39-201ENST00000355765 FNDC1Q4ZHG4 1894 aaPredicted RBP18.61■□□□□ 0.57
PRPF39-201ENST00000355765 ASB14A6NK59 587 aa18.6■□□□□ 0.57
PRPF39-201ENST00000355765 RECQL4O94761 1208 aa18.6■□□□□ 0.57
PRPF39-201ENST00000355765 PRSS56P0CW18 603 aa18.6■□□□□ 0.57
PRPF39-201ENST00000355765 G6PDP11413 515 aa18.6■□□□□ 0.57
PRPF39-201ENST00000355765 ZNF37AP17032 561 aaPredicted RBP18.6■□□□□ 0.57
PRPF39-201ENST00000355765 SERPINH1P50454 418 aaKnown RBP18.6■□□□□ 0.57
PRPF39-201ENST00000355765 AIF1P55008 147 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms