RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 VWA7Q9Y334 891 aa9.26□□□□□ -0.93
SMG6-202ENST00000354901 MYLKQ15746 1914 aa9.26□□□□□ -0.93
SMG6-202ENST00000354901 A0A087X1B8 175 aa9.25□□□□□ -0.93
SMG6-202ENST00000354901 NPHS1O60500 1241 aa9.25□□□□□ -0.93
SMG6-202ENST00000354901 MBL2P11226 248 aaPredicted RBP9.25□□□□□ -0.93
SMG6-202ENST00000354901 ENPP1P22413 925 aa9.25□□□□□ -0.93
SMG6-202ENST00000354901 FSHRP23945 695 aa9.25□□□□□ -0.93
SMG6-202ENST00000354901 CYP2C18P33260 490 aa9.25□□□□□ -0.93
SMG6-202ENST00000354901 SERPINB10P48595 397 aa9.25□□□□□ -0.93
SMG6-202ENST00000354901 PLIN5Q00G26 463 aa9.25□□□□□ -0.93
SMG6-202ENST00000354901 YWHAHQ04917 246 aaPredicted RBP9.25□□□□□ -0.93
SMG6-202ENST00000354901 STX5Q13190 355 aa9.25□□□□□ -0.93
SMG6-202ENST00000354901 DGUOKQ16854 277 aa9.25□□□□□ -0.93
SMG6-202ENST00000354901 PFKFB4Q16877 469 aa9.25□□□□□ -0.93
SMG6-202ENST00000354901 CNTN4Q8IWV2 1026 aa9.25□□□□□ -0.93
SMG6-202ENST00000354901 MICU2Q8IYU8 434 aa9.25□□□□□ -0.93
SMG6-202ENST00000354901 TCAIMQ8N3R3 496 aa9.25□□□□□ -0.93
SMG6-202ENST00000354901 AFAP1L2Q8N4X5 818 aa9.25□□□□□ -0.93
SMG6-202ENST00000354901 RTL3Q8N8U3 475 aaKnown RBP9.25□□□□□ -0.93
SMG6-202ENST00000354901 DCBLD1Q8N8Z6 715 aa9.25□□□□□ -0.93
SMG6-202ENST00000354901 OR13C4Q8NGS5 318 aa9.25□□□□□ -0.93
SMG6-202ENST00000354901 OR13J1Q8NGT2 312 aa9.25□□□□□ -0.93
SMG6-202ENST00000354901 OR2T34Q8NGX1 318 aa9.25□□□□□ -0.93
SMG6-202ENST00000354901 MCFD2Q8NI22 146 aa9.25□□□□□ -0.93
SMG6-202ENST00000354901 RPL3LQ92901 407 aaKnown RBP9.25□□□□□ -0.93
SMG6-202ENST00000354901 C9orf16Q9BUW7 83 aa9.25□□□□□ -0.93
SMG6-202ENST00000354901 GMIPQ9P107 970 aa9.25□□□□□ -0.93
SMG6-202ENST00000354901 ENPP5Q9UJA9 477 aa9.25□□□□□ -0.93
SMG6-202ENST00000354901 TESMINQ9Y4I5 508 aa9.25□□□□□ -0.93
SMG6-202ENST00000354901 ARL5AQ9Y689 179 aa9.25□□□□□ -0.93
SMG6-202ENST00000354901 EPN2O95208 641 aa9.25□□□□□ -0.93
SMG6-202ENST00000354901 IGHA2P01877 340 aa9.25□□□□□ -0.93
SMG6-202ENST00000354901 RPLP2P05387 115 aaKnown RBP9.25□□□□□ -0.93
SMG6-202ENST00000354901 AGXTP21549 392 aa9.25□□□□□ -0.93
SMG6-202ENST00000354901 CBLP22681 906 aa9.25□□□□□ -0.93
SMG6-202ENST00000354901 ALDH7A1P49419 539 aaKnown RBP9.25□□□□□ -0.93
SMG6-202ENST00000354901 CSRP3P50461 194 aa9.25□□□□□ -0.93
SMG6-202ENST00000354901 OR2B6P58173 313 aa9.25□□□□□ -0.93
SMG6-202ENST00000354901 INPP5AQ14642 412 aa9.25□□□□□ -0.93
SMG6-202ENST00000354901 HABP4Q5JVS0 413 aaKnown RBP9.25□□□□□ -0.93
SMG6-202ENST00000354901 STEAP3Q658P3 488 aa9.25□□□□□ -0.93
SMG6-202ENST00000354901 ERAP2Q6P179 960 aa9.25□□□□□ -0.93
SMG6-202ENST00000354901 FAM171BQ6P995 826 aa9.25□□□□□ -0.93
SMG6-202ENST00000354901 UBE2J2Q8N2K1 259 aa9.25□□□□□ -0.93
SMG6-202ENST00000354901 PIK3R3Q92569 461 aa9.25□□□□□ -0.93
SMG6-202ENST00000354901 ESAMQ96AP7 390 aa9.25□□□□□ -0.93
SMG6-202ENST00000354901 EXOC2Q96KP1 924 aa9.25□□□□□ -0.93
SMG6-202ENST00000354901 SMIM14Q96QK8 99 aa9.25□□□□□ -0.93
SMG6-202ENST00000354901 DOK1Q99704 481 aa9.25□□□□□ -0.93
SMG6-202ENST00000354901 MID1IP1Q9NPA3 183 aa9.25□□□□□ -0.93
SMG6-202ENST00000354901 TBC1D13Q9NVG8 400 aa9.25□□□□□ -0.93
SMG6-202ENST00000354901 C14orf119Q9NWQ9 140 aa9.25□□□□□ -0.93
SMG6-202ENST00000354901 EVLQ9UI08 416 aaPredicted RBP9.25□□□□□ -0.93
SMG6-202ENST00000354901 PTBP2Q9UKA9 531 aaKnown RBP9.25□□□□□ -0.93
SMG6-202ENST00000354901 FAM50BQ9Y247 325 aa9.25□□□□□ -0.93
SMG6-202ENST00000354901 MAU2Q9Y6X3 613 aa9.25□□□□□ -0.93
SMG6-202ENST00000354901 UBXN8O00124 270 aa9.25□□□□□ -0.93
SMG6-202ENST00000354901 DLGAP1O14490 977 aa9.25□□□□□ -0.93
SMG6-202ENST00000354901 FGF10O15520 208 aaPredicted RBP9.25□□□□□ -0.93
SMG6-202ENST00000354901 PRLP01236 227 aa9.25□□□□□ -0.93
SMG6-202ENST00000354901 TP53P04637 393 aaPredicted RBP9.25□□□□□ -0.93
SMG6-202ENST00000354901 SNRPB2P08579 225 aaKnown RBP9.25□□□□□ -0.93
SMG6-202ENST00000354901 MAP2K4P45985 399 aa9.25□□□□□ -0.93
SMG6-202ENST00000354901 SLC9A3P48764 834 aa9.25□□□□□ -0.93
SMG6-202ENST00000354901 HLCSP50747 726 aa9.25□□□□□ -0.93
SMG6-202ENST00000354901 FOXA1P55317 472 aa9.25□□□□□ -0.93
SMG6-202ENST00000354901 CD83Q01151 205 aa9.25□□□□□ -0.93
SMG6-202ENST00000354901 ILF2Q12905 390 aaKnown RBP9.25□□□□□ -0.93
SMG6-202ENST00000354901 VPS26BQ4G0F5 336 aa9.25□□□□□ -0.93
SMG6-202ENST00000354901 BRMS1LQ5PSV4 323 aa9.25□□□□□ -0.93
SMG6-202ENST00000354901 TIGD7Q6NT04 549 aaPredicted RBP9.25□□□□□ -0.93
SMG6-202ENST00000354901 PTGR2Q8N8N7 351 aaPredicted RBP9.25□□□□□ -0.93
SMG6-202ENST00000354901 ATAD1Q8NBU5 361 aa9.25□□□□□ -0.93
SMG6-202ENST00000354901 PDPRQ8NCN5 879 aa9.25□□□□□ -0.93
SMG6-202ENST00000354901 PCNPQ8WW12 178 aaKnown RBP9.25□□□□□ -0.93
SMG6-202ENST00000354901 S100ZQ8WXG8 99 aa9.25□□□□□ -0.93
SMG6-202ENST00000354901 PTERQ96BW5 349 aa9.25□□□□□ -0.93
SMG6-202ENST00000354901 CYP2S1Q96SQ9 504 aa9.25□□□□□ -0.93
SMG6-202ENST00000354901 TNKS2Q9H2K2 1166 aa9.25□□□□□ -0.93
SMG6-202ENST00000354901 EML4Q9HC35 981 aaKnown RBP9.25□□□□□ -0.93
SMG6-202ENST00000354901 AKIP1Q9NQ31 210 aa9.25□□□□□ -0.93
SMG6-202ENST00000354901 CNOT11Q9UKZ1 510 aaKnown RBP9.25□□□□□ -0.93
SMG6-202ENST00000354901 ARHGAP33O14559 1287 aa9.24□□□□□ -0.93
SMG6-202ENST00000354901 XPNPEP2O43895 674 aa9.24□□□□□ -0.93
SMG6-202ENST00000354901 CACNG3O60359 315 aa9.24□□□□□ -0.93
SMG6-202ENST00000354901 ACSL4O60488 711 aa9.24□□□□□ -0.93
SMG6-202ENST00000354901 B4GALT3O60512 393 aa9.24□□□□□ -0.93
SMG6-202ENST00000354901 ALDH1A1P00352 501 aa9.24□□□□□ -0.93
SMG6-202ENST00000354901 APOA1P02647 267 aa9.24□□□□□ -0.93
SMG6-202ENST00000354901 DNAJB2P25686 324 aa9.24□□□□□ -0.93
SMG6-202ENST00000354901 CLK1P49759 484 aaKnown RBP9.24□□□□□ -0.93
SMG6-202ENST00000354901 MLLT6P55198 1093 aaPredicted RBP9.24□□□□□ -0.93
SMG6-202ENST00000354901 TBX4P57082 545 aa9.24□□□□□ -0.93
SMG6-202ENST00000354901 RPS6KA2Q15349 733 aa9.24□□□□□ -0.93
SMG6-202ENST00000354901 NFE2Q16621 373 aaPredicted RBP9.24□□□□□ -0.93
SMG6-202ENST00000354901 SLC36A3Q495N2 470 aa9.24□□□□□ -0.93
SMG6-202ENST00000354901 KDELC1Q6UW63 502 aa9.24□□□□□ -0.93
SMG6-202ENST00000354901 GALNT7Q86SF2 657 aa9.24□□□□□ -0.93
SMG6-202ENST00000354901 CILP2Q8IUL8 1156 aa9.24□□□□□ -0.93
SMG6-202ENST00000354901 OR8H2Q8N162 312 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms