RNA–Protein interactions for RNA: ENST00000354848.5

CD46-203, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-203ENST00000354848 SLC2A6Q9UGQ3 507 aa7.75□□□□□ -1.17
CD46-203ENST00000354848 NUP50Q9UKX7 468 aa7.75□□□□□ -1.17
CD46-203ENST00000354848 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.75□□□□□ -1.17
CD46-203ENST00000354848 ORC6Q9Y5N6 252 aa7.75□□□□□ -1.17
CD46-203ENST00000354848 LYVE1Q9Y5Y7 322 aa7.75□□□□□ -1.17
CD46-203ENST00000354848 U3KQV3 271 aa7.75□□□□□ -1.17
CD46-203ENST00000354848 YDJCA8MPS7 323 aa7.75□□□□□ -1.17
CD46-203ENST00000354848 TFECO14948 347 aaPredicted RBP7.75□□□□□ -1.17
CD46-203ENST00000354848 FAM20BO75063 409 aa7.75□□□□□ -1.17
CD46-203ENST00000354848 CYBBP04839 570 aa7.75□□□□□ -1.17
CD46-203ENST00000354848 PGK2P07205 417 aa7.75□□□□□ -1.17
CD46-203ENST00000354848 CYP4B1P13584 511 aa7.75□□□□□ -1.17
CD46-203ENST00000354848 GRK5P34947 590 aa7.75□□□□□ -1.17
CD46-203ENST00000354848 CTSKP43235 329 aa7.75□□□□□ -1.17
CD46-203ENST00000354848 SLC9A3P48764 834 aa7.75□□□□□ -1.17
CD46-203ENST00000354848 POLR2JP52435 117 aaKnown RBP7.75□□□□□ -1.17
CD46-203ENST00000354848 EFNA5P52803 228 aa7.75□□□□□ -1.17
CD46-203ENST00000354848 RAD51Q06609 339 aa7.75□□□□□ -1.17
CD46-203ENST00000354848 IRF3Q14653 427 aa7.75□□□□□ -1.17
CD46-203ENST00000354848 RFX4Q33E94 735 aa7.75□□□□□ -1.17
CD46-203ENST00000354848 PCID2Q5JVF3 399 aa7.75□□□□□ -1.17
CD46-203ENST00000354848 NAPEPLDQ6IQ20 393 aa7.75□□□□□ -1.17
CD46-203ENST00000354848 MPZL3Q6UWV2 235 aa7.75□□□□□ -1.17
CD46-203ENST00000354848 CCDC190Q86UF4 302 aa7.75□□□□□ -1.17
CD46-203ENST00000354848 ZDHHC17Q8IUH5 632 aa7.75□□□□□ -1.17
CD46-203ENST00000354848 OR8H2Q8N162 312 aa7.75□□□□□ -1.17
CD46-203ENST00000354848 ZMIZ2Q8NF64 920 aa7.75□□□□□ -1.17
CD46-203ENST00000354848 OR4M1Q8NGD0 313 aa7.75□□□□□ -1.17
CD46-203ENST00000354848 ZFAND1Q8TCF1 268 aa7.75□□□□□ -1.17
CD46-203ENST00000354848 PPM1MQ96MI6 270 aa7.75□□□□□ -1.17
CD46-203ENST00000354848 CCNB1IP1Q9NPC3 277 aa7.75□□□□□ -1.17
CD46-203ENST00000354848 ZNF302Q9NR11 478 aa7.75□□□□□ -1.17
CD46-203ENST00000354848 MAFBQ9Y5Q3 323 aaPredicted RBP7.75□□□□□ -1.17
CD46-203ENST00000354848 SCN9AQ15858 1988 aa7.75□□□□□ -1.17
CD46-203ENST00000354848 UBR3Q6ZT12 1888 aa7.75□□□□□ -1.17
CD46-203ENST00000354848 CLRN2A0PK11 232 aa7.74□□□□□ -1.17
CD46-203ENST00000354848 LRRC14BA6NHZ5 514 aa7.74□□□□□ -1.17
CD46-203ENST00000354848 M0R082 166 aa7.74□□□□□ -1.17
CD46-203ENST00000354848 DCLK1O15075 740 aa7.74□□□□□ -1.17
CD46-203ENST00000354848 SLC22A3O75751 556 aa7.74□□□□□ -1.17
CD46-203ENST00000354848 UGT2B17O75795 530 aa7.74□□□□□ -1.17
CD46-203ENST00000354848 ARHGEF15O94989 841 aa7.74□□□□□ -1.17
CD46-203ENST00000354848 SIX3O95343 332 aaPredicted RBP7.74□□□□□ -1.17
CD46-203ENST00000354848 PPP3CCP48454 512 aa7.74□□□□□ -1.17
CD46-203ENST00000354848 UGT2B15P54855 530 aa7.74□□□□□ -1.17
CD46-203ENST00000354848 CD83Q01151 205 aa7.74□□□□□ -1.17
CD46-203ENST00000354848 FAPQ12884 760 aa7.74□□□□□ -1.17
CD46-203ENST00000354848 EFR3AQ14156 821 aa7.74□□□□□ -1.17
CD46-203ENST00000354848 PUS10Q3MIT2 529 aaKnown RBP7.74□□□□□ -1.17
CD46-203ENST00000354848 SOWAHCQ53LP3 525 aaPredicted RBP7.74□□□□□ -1.17
CD46-203ENST00000354848 DPY19L3Q6ZPD9 716 aa7.74□□□□□ -1.17
CD46-203ENST00000354848 AHSA2Q719I0 299 aa7.74□□□□□ -1.17
CD46-203ENST00000354848 KCTD20Q7Z5Y7 419 aa7.74□□□□□ -1.17
CD46-203ENST00000354848 SETD6Q8TBK2 473 aa7.74□□□□□ -1.17
CD46-203ENST00000354848 PPP1R13LQ8WUF5 828 aa7.74□□□□□ -1.17
CD46-203ENST00000354848 EXT2Q93063 718 aa7.74□□□□□ -1.17
CD46-203ENST00000354848 PMEPA1Q969W9 287 aa7.74□□□□□ -1.17
CD46-203ENST00000354848 HPDLQ96IR7 371 aa7.74□□□□□ -1.17
CD46-203ENST00000354848 SIGLEC11Q96RL6 698 aa7.74□□□□□ -1.17
CD46-203ENST00000354848 APOL4Q9BPW4 351 aa7.74□□□□□ -1.17
CD46-203ENST00000354848 ACAT2Q9BWD1 397 aa7.74□□□□□ -1.17
CD46-203ENST00000354848 C1QTNF7Q9BXJ2 289 aa7.74□□□□□ -1.17
CD46-203ENST00000354848 PRRG3Q9BZD7 231 aa7.74□□□□□ -1.17
CD46-203ENST00000354848 ACTR8Q9H981 624 aa7.74□□□□□ -1.17
CD46-203ENST00000354848 RPF1Q9H9Y2 349 aaKnown RBP7.74□□□□□ -1.17
CD46-203ENST00000354848 AIG1Q9NVV5 245 aa7.74□□□□□ -1.17
CD46-203ENST00000354848 HCN4Q9Y3Q4 1203 aa7.74□□□□□ -1.17
CD46-203ENST00000354848 PCDHGB2Q9Y5G2 931 aa7.74□□□□□ -1.17
CD46-203ENST00000354848 COL16A1Q07092 1604 aaPredicted RBP7.74□□□□□ -1.17
CD46-203ENST00000354848 PARP14Q460N5 1801 aa7.74□□□□□ -1.17
CD46-203ENST00000354848 SYNJ2BP-COX16A0A087WUM0 186 aa7.74□□□□□ -1.17
CD46-203ENST00000354848 OR6C70A6NIJ9 312 aa7.74□□□□□ -1.17
CD46-203ENST00000354848 PDPK1O15530 556 aa7.74□□□□□ -1.17
CD46-203ENST00000354848 SLITRK5O94991 958 aa7.74□□□□□ -1.17
CD46-203ENST00000354848 ATICP31939 592 aa7.74□□□□□ -1.17
CD46-203ENST00000354848 HNF4AP41235 474 aa7.74□□□□□ -1.17
CD46-203ENST00000354848 IL12RB1P42701 662 aa7.74□□□□□ -1.17
CD46-203ENST00000354848 RPS5P46782 204 aaKnown RBP7.74□□□□□ -1.17
CD46-203ENST00000354848 ARPP19P56211 112 aa7.74□□□□□ -1.17
CD46-203ENST00000354848 BAATQ14032 418 aaPredicted RBP7.74□□□□□ -1.17
CD46-203ENST00000354848 C5orf22Q49AR2 442 aa7.74□□□□□ -1.17
CD46-203ENST00000354848 CCNJQ5T5M9 372 aa7.74□□□□□ -1.17
CD46-203ENST00000354848 KIAA0319Q5VV43 1072 aa7.74□□□□□ -1.17
CD46-203ENST00000354848 EEF1DP3Q658K8 133 aa7.74□□□□□ -1.17
CD46-203ENST00000354848 CAPN13Q6MZZ7 669 aaPredicted RBP7.74□□□□□ -1.17
CD46-203ENST00000354848 DLEU7Q6UYE1 221 aa7.74□□□□□ -1.17
CD46-203ENST00000354848 ACOT1Q86TX2 421 aa7.74□□□□□ -1.17
CD46-203ENST00000354848 ISCA2Q86U28 154 aa7.74□□□□□ -1.17
CD46-203ENST00000354848 ADHFE1Q8IWW8 467 aa7.74□□□□□ -1.17
CD46-203ENST00000354848 CDAN1Q8IWY9 1227 aa7.74□□□□□ -1.17
CD46-203ENST00000354848 DPF3Q92784 378 aa7.74□□□□□ -1.17
CD46-203ENST00000354848 Q96MT0 163 aa7.74□□□□□ -1.17
CD46-203ENST00000354848 NSUN5Q96P11 429 aaKnown RBP7.74□□□□□ -1.17
CD46-203ENST00000354848 TRNT1Q96Q11 434 aaKnown RBP7.74□□□□□ -1.17
CD46-203ENST00000354848 C2orf49Q9BVC5 232 aaPredicted RBP7.74□□□□□ -1.17
CD46-203ENST00000354848 RIBC2Q9H4K1 309 aa7.74□□□□□ -1.17
CD46-203ENST00000354848 GORASP2Q9H8Y8 452 aa7.74□□□□□ -1.17
CD46-203ENST00000354848 COX16Q9P0S2 106 aa7.74□□□□□ -1.17
CD46-203ENST00000354848 LIMD1Q9UGP4 676 aa7.74□□□□□ -1.17
CD46-203ENST00000354848 CDH9Q9ULB4 789 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms