RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 TIMMDC1Q9NPL8 285 aa19.26■□□□□ 0.67
COL13A1-201ENST00000354547 ELOVL2Q9NXB9 296 aa19.26■□□□□ 0.67
COL13A1-201ENST00000354547 VAPAQ9P0L0 249 aa19.26■□□□□ 0.67
COL13A1-201ENST00000354547 IL17CQ9P0M4 197 aa19.26■□□□□ 0.67
COL13A1-201ENST00000354547 KLQ9UEF7 1012 aa19.26■□□□□ 0.67
COL13A1-201ENST00000354547 PHF24Q9UPV7 400 aa19.26■□□□□ 0.67
COL13A1-201ENST00000354547 LSM1O15116 133 aaKnown RBP19.25■□□□□ 0.67
COL13A1-201ENST00000354547 MAGEB3O15480 346 aa19.25■□□□□ 0.67
COL13A1-201ENST00000354547 ALBP02768 609 aa19.25■□□□□ 0.67
COL13A1-201ENST00000354547 TCF3P15923 654 aa19.25■□□□□ 0.67
COL13A1-201ENST00000354547 SREBF2Q12772 1141 aa19.25■□□□□ 0.67
COL13A1-201ENST00000354547 C5orf22Q49AR2 442 aa19.25■□□□□ 0.67
COL13A1-201ENST00000354547 SBSNQ6UWP8 590 aa19.25■□□□□ 0.67
COL13A1-201ENST00000354547 TMEM26Q6ZUK4 368 aa19.25■□□□□ 0.67
COL13A1-201ENST00000354547 KCTD8Q6ZWB6 473 aa19.25■□□□□ 0.67
COL13A1-201ENST00000354547 HS3ST5Q8IZT8 346 aa19.25■□□□□ 0.67
COL13A1-201ENST00000354547 LRRC43Q8N309 656 aa19.25■□□□□ 0.67
COL13A1-201ENST00000354547 NAT16Q8N8M0 369 aa19.25■□□□□ 0.67
COL13A1-201ENST00000354547 OR10Q1Q8NGQ4 319 aa19.25■□□□□ 0.67
COL13A1-201ENST00000354547 OR10A6Q8NH74 314 aa19.25■□□□□ 0.67
COL13A1-201ENST00000354547 TSPEARQ8WU66 669 aa19.25■□□□□ 0.67
COL13A1-201ENST00000354547 HSPBAP1Q96EW2 488 aa19.25■□□□□ 0.67
COL13A1-201ENST00000354547 BDH2Q9BUT1 245 aa19.25■□□□□ 0.67
COL13A1-201ENST00000354547 NPLQ9BXD5 320 aaPredicted RBP19.25■□□□□ 0.67
COL13A1-201ENST00000354547 TRPM5Q9NZQ8 1165 aa19.25■□□□□ 0.67
COL13A1-201ENST00000354547 AFF4Q9UHB7 1163 aaKnown RBP19.25■□□□□ 0.67
COL13A1-201ENST00000354547 UTS2RQ9UKP6 389 aa19.25■□□□□ 0.67
COL13A1-201ENST00000354547 FAF1Q9UNN5 650 aaPredicted RBP19.25■□□□□ 0.67
COL13A1-201ENST00000354547 KANSL1LA0AUZ9 987 aa19.25■□□□□ 0.67
COL13A1-201ENST00000354547 H7C4K7 107 aa19.25■□□□□ 0.67
COL13A1-201ENST00000354547 GSTA4O15217 222 aa19.25■□□□□ 0.67
COL13A1-201ENST00000354547 SLC25A14O95258 325 aaPredicted RBP19.25■□□□□ 0.67
COL13A1-201ENST00000354547 PHKG1Q16816 387 aa19.25■□□□□ 0.67
COL13A1-201ENST00000354547 FAM174BQ3ZCQ3 159 aa19.25■□□□□ 0.67
COL13A1-201ENST00000354547 ZBED5Q49AG3 693 aa19.25■□□□□ 0.67
COL13A1-201ENST00000354547 AARS2Q5JTZ9 985 aaKnown RBP19.25■□□□□ 0.67
COL13A1-201ENST00000354547 NCEH1Q6PIU2 408 aa19.25■□□□□ 0.67
COL13A1-201ENST00000354547 ITIH5Q86UX2 942 aa19.25■□□□□ 0.67
COL13A1-201ENST00000354547 KRTCAP2Q8N6L1 136 aa19.25■□□□□ 0.67
COL13A1-201ENST00000354547 WFDC5Q8TCV5 224 aa19.25■□□□□ 0.67
COL13A1-201ENST00000354547 TMBIM1Q969X1 311 aa19.25■□□□□ 0.67
COL13A1-201ENST00000354547 LATS2Q9NRM7 1088 aa19.25■□□□□ 0.67
COL13A1-201ENST00000354547 DHRS7Q9Y394 339 aa19.25■□□□□ 0.67
COL13A1-201ENST00000354547 C1orf232A0A0U1RR37 186 aa19.25■□□□□ 0.67
COL13A1-201ENST00000354547 TYW5A2RUC4 315 aaKnown RBP19.25■□□□□ 0.67
COL13A1-201ENST00000354547 CST5P28325 142 aaPredicted RBP19.25■□□□□ 0.67
COL13A1-201ENST00000354547 HTR1EP28566 365 aa19.25■□□□□ 0.67
COL13A1-201ENST00000354547 ADARP55265 1226 aaKnown RBP19.25■□□□□ 0.67
COL13A1-201ENST00000354547 ILF2Q12905 390 aaKnown RBP19.25■□□□□ 0.67
COL13A1-201ENST00000354547 TCTN1Q2MV58 587 aa19.25■□□□□ 0.67
COL13A1-201ENST00000354547 ACBD5Q5T8D3 534 aaPredicted RBP19.25■□□□□ 0.67
COL13A1-201ENST00000354547 IRAK1BP1Q5VVH5 260 aa19.25■□□□□ 0.67
COL13A1-201ENST00000354547 ANKRD34AQ69YU3 496 aa19.25■□□□□ 0.67
COL13A1-201ENST00000354547 ADNPQ9H2P0 1102 aa19.25■□□□□ 0.67
COL13A1-201ENST00000354547 NUDT4Q9NZJ9 180 aa19.25■□□□□ 0.67
COL13A1-201ENST00000354547 TBC1D4O60343 1298 aa19.24■□□□□ 0.67
COL13A1-201ENST00000354547 GMNNO75496 209 aa19.24■□□□□ 0.67
COL13A1-201ENST00000354547 ATE1O95260 518 aa19.24■□□□□ 0.67
COL13A1-201ENST00000354547 ENTPD1P49961 510 aa19.24■□□□□ 0.67
COL13A1-201ENST00000354547 CACNG1Q06432 222 aa19.24■□□□□ 0.67
COL13A1-201ENST00000354547 ENPP6Q6UWR7 440 aa19.24■□□□□ 0.67
COL13A1-201ENST00000354547 PATL1Q86TB9 770 aaKnown RBP19.24■□□□□ 0.67
COL13A1-201ENST00000354547 PDZD8Q8NEN9 1154 aa19.24■□□□□ 0.67
COL13A1-201ENST00000354547 OSCP1Q8WVF1 389 aa19.24■□□□□ 0.67
COL13A1-201ENST00000354547 SLC22A12Q96S37 553 aa19.24■□□□□ 0.67
COL13A1-201ENST00000354547 WWOXQ9NZC7 414 aa19.24■□□□□ 0.67
COL13A1-201ENST00000354547 PKD2L2Q9NZM6 624 aa19.24■□□□□ 0.67
COL13A1-201ENST00000354547 LIMD1Q9UGP4 676 aa19.24■□□□□ 0.67
COL13A1-201ENST00000354547 NUP214P35658 2090 aaPredicted RBP19.24■□□□□ 0.67
COL13A1-201ENST00000354547 GBF1Q92538 1859 aa19.24■□□□□ 0.67
COL13A1-201ENST00000354547 SMAD6O43541 496 aaKnown RBP19.24■□□□□ 0.67
COL13A1-201ENST00000354547 NOBOXO60393 691 aa19.24■□□□□ 0.67
COL13A1-201ENST00000354547 GRIK2Q13002 908 aa19.24■□□□□ 0.67
COL13A1-201ENST00000354547 RAB39AQ14964 217 aa19.24■□□□□ 0.67
COL13A1-201ENST00000354547 SLC44A4Q53GD3 710 aa19.24■□□□□ 0.67
COL13A1-201ENST00000354547 ING2Q9H160 280 aa19.24■□□□□ 0.67
COL13A1-201ENST00000354547 CARS2Q9HA77 564 aaKnown RBP19.24■□□□□ 0.67
COL13A1-201ENST00000354547 LHX3Q9UBR4 397 aa19.24■□□□□ 0.67
COL13A1-201ENST00000354547 A0A1W2PQ45 241 aaPredicted RBP19.23■□□□□ 0.67
COL13A1-201ENST00000354547 A0A1W2PQY0 241 aa19.23■□□□□ 0.67
COL13A1-201ENST00000354547 CLDN7O95471 211 aa19.23■□□□□ 0.67
COL13A1-201ENST00000354547 MBL2P11226 248 aaPredicted RBP19.23■□□□□ 0.67
COL13A1-201ENST00000354547 MTHFRP42898 656 aa19.23■□□□□ 0.67
COL13A1-201ENST00000354547 CLCN4P51793 760 aa19.23■□□□□ 0.67
COL13A1-201ENST00000354547 NKX3-2P78367 333 aa19.23■□□□□ 0.67
COL13A1-201ENST00000354547 SMAD3P84022 425 aaKnown RBP19.23■□□□□ 0.67
COL13A1-201ENST00000354547 GTDC1Q4AE62 458 aa19.23■□□□□ 0.67
COL13A1-201ENST00000354547 PROSER1Q86XN7 944 aa19.23■□□□□ 0.67
COL13A1-201ENST00000354547 PHACTR4Q8IZ21 702 aa19.23■□□□□ 0.67
COL13A1-201ENST00000354547 P2RY12Q9H244 342 aa19.23■□□□□ 0.67
COL13A1-201ENST00000354547 IKZF5Q9H5V7 419 aa19.23■□□□□ 0.67
COL13A1-201ENST00000354547 SMURF2Q9HAU4 748 aa19.23■□□□□ 0.67
COL13A1-201ENST00000354547 NTN4Q9HB63 628 aa19.23■□□□□ 0.67
COL13A1-201ENST00000354547 RAD51BO15315 384 aa19.23■□□□□ 0.67
COL13A1-201ENST00000354547 TAPBPO15533 448 aa19.23■□□□□ 0.67
COL13A1-201ENST00000354547 SEC22BO75396 215 aa19.23■□□□□ 0.67
COL13A1-201ENST00000354547 UMPSP11172 480 aa19.23■□□□□ 0.67
COL13A1-201ENST00000354547 CSKP41240 450 aa19.23■□□□□ 0.67
COL13A1-201ENST00000354547 CHRNB3Q05901 458 aa19.23■□□□□ 0.67
COL13A1-201ENST00000354547 C16orf72Q14CZ0 275 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms