RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 ANGPTL3Q9Y5C1 460 aa16.42■□□□□ 0.22
SAMM50-201ENST00000350028 CEP290O15078 2479 aa16.41■□□□□ 0.22
SAMM50-201ENST00000350028 ANKRD12Q6UB98 2062 aa16.41■□□□□ 0.22
SAMM50-201ENST00000350028 PRORSD1PA6NEY8 169 aa16.41■□□□□ 0.22
SAMM50-201ENST00000350028 SYNCRIPO60506 623 aaKnown RBP16.41■□□□□ 0.22
SAMM50-201ENST00000350028 STAMBPO95630 424 aa16.41■□□□□ 0.22
SAMM50-201ENST00000350028 ASLP04424 464 aa16.41■□□□□ 0.22
SAMM50-201ENST00000350028 MSH3P20585 1137 aa16.41■□□□□ 0.22
SAMM50-201ENST00000350028 HMOX2P30519 316 aa16.41■□□□□ 0.22
SAMM50-201ENST00000350028 KCNK10P57789 538 aa16.41■□□□□ 0.22
SAMM50-201ENST00000350028 B4GALNT1Q00973 533 aa16.41■□□□□ 0.22
SAMM50-201ENST00000350028 TRAF3Q13114 568 aa16.41■□□□□ 0.22
SAMM50-201ENST00000350028 CAMK1Q14012 370 aa16.41■□□□□ 0.22
SAMM50-201ENST00000350028 PHKG1Q16816 387 aa16.41■□□□□ 0.22
SAMM50-201ENST00000350028 SPATS1Q496A3 300 aa16.41■□□□□ 0.22
SAMM50-201ENST00000350028 VPS26BQ4G0F5 336 aa16.41■□□□□ 0.22
SAMM50-201ENST00000350028 PDE12Q6L8Q7 609 aaKnown RBP16.41■□□□□ 0.22
SAMM50-201ENST00000350028 RNF165Q6ZSG1 346 aa16.41■□□□□ 0.22
SAMM50-201ENST00000350028 Q6ZSR9 355 aa16.41■□□□□ 0.22
SAMM50-201ENST00000350028 SPATA24Q86W54 205 aa16.41■□□□□ 0.22
SAMM50-201ENST00000350028 CELF5Q8N6W0 485 aaKnown RBP16.41■□□□□ 0.22
SAMM50-201ENST00000350028 NAT16Q8N8M0 369 aa16.41■□□□□ 0.22
SAMM50-201ENST00000350028 WFIKKN2Q8TEU8 576 aa16.41■□□□□ 0.22
SAMM50-201ENST00000350028 SPDL1Q96EA4 605 aa16.41■□□□□ 0.22
SAMM50-201ENST00000350028 LRIG1Q96JA1 1093 aa16.41■□□□□ 0.22
SAMM50-201ENST00000350028 LRGUKQ96M69 825 aa16.41■□□□□ 0.22
SAMM50-201ENST00000350028 CDK15Q96Q40 435 aa16.41■□□□□ 0.22
SAMM50-201ENST00000350028 NR1H4Q96RI1 486 aaPredicted RBP16.41■□□□□ 0.22
SAMM50-201ENST00000350028 MTIF3Q9H2K0 278 aaKnown RBP16.41■□□□□ 0.22
SAMM50-201ENST00000350028 SLC52A3Q9NQ40 469 aa16.41■□□□□ 0.22
SAMM50-201ENST00000350028 SMOXQ9NWM0 555 aa16.41■□□□□ 0.22
SAMM50-201ENST00000350028 PRSS51A0A1B0GVH4 220 aa16.4■□□□□ 0.22
SAMM50-201ENST00000350028 A0A1W2PP18 115 aa16.4■□□□□ 0.22
SAMM50-201ENST00000350028 K7EPI3 171 aa16.4■□□□□ 0.22
SAMM50-201ENST00000350028 SLC22A3O75751 556 aa16.4■□□□□ 0.22
SAMM50-201ENST00000350028 C8BP07358 591 aa16.4■□□□□ 0.22
SAMM50-201ENST00000350028 SRPRAP08240 638 aaKnown RBP16.4■□□□□ 0.22
SAMM50-201ENST00000350028 MPC1LP0DKB6 136 aa16.4■□□□□ 0.22
SAMM50-201ENST00000350028 CEBPBP17676 345 aa16.4■□□□□ 0.22
SAMM50-201ENST00000350028 AOAHP28039 575 aa16.4■□□□□ 0.22
SAMM50-201ENST00000350028 CCR7P32248 378 aa16.4■□□□□ 0.22
SAMM50-201ENST00000350028 SLC7A2P52569 658 aa16.4■□□□□ 0.22
SAMM50-201ENST00000350028 DCDC1P59894 354 aa16.4■□□□□ 0.22
SAMM50-201ENST00000350028 EMX2Q04743 252 aa16.4■□□□□ 0.22
SAMM50-201ENST00000350028 ADGRE1Q14246 886 aa16.4■□□□□ 0.22
SAMM50-201ENST00000350028 IL27RAQ6UWB1 636 aa16.4■□□□□ 0.22
SAMM50-201ENST00000350028 FAM156AQ8NDB6 213 aa16.4■□□□□ 0.22
SAMM50-201ENST00000350028 CATSPER1Q8NEC5 780 aa16.4■□□□□ 0.22
SAMM50-201ENST00000350028 HCAR2Q8TDS4 363 aa16.4■□□□□ 0.22
SAMM50-201ENST00000350028 TMEM79Q9BSE2 394 aa16.4■□□□□ 0.22
SAMM50-201ENST00000350028 SPATA16Q9BXB7 569 aa16.4■□□□□ 0.22
SAMM50-201ENST00000350028 FAM83DQ9H4H8 585 aa16.4■□□□□ 0.22
SAMM50-201ENST00000350028 ABCD2Q9UBJ2 740 aa16.4■□□□□ 0.22
SAMM50-201ENST00000350028 MRPS23Q9Y3D9 190 aaKnown RBP16.4■□□□□ 0.22
SAMM50-201ENST00000350028 DYTNA2CJ06 578 aa16.39■□□□□ 0.21
SAMM50-201ENST00000350028 TTC34A8MYJ7 566 aa16.39■□□□□ 0.21
SAMM50-201ENST00000350028 UPK3BL1B0FP48 263 aa16.39■□□□□ 0.21
SAMM50-201ENST00000350028 UPK3BL2E5RIL1 263 aa16.39■□□□□ 0.21
SAMM50-201ENST00000350028 KPNA5O15131 536 aa16.39■□□□□ 0.21
SAMM50-201ENST00000350028 WDR47O94967 919 aa16.39■□□□□ 0.21
SAMM50-201ENST00000350028 ANXA5P08758 320 aa16.39■□□□□ 0.21
SAMM50-201ENST00000350028 ENO2P09104 434 aaPredicted RBP16.39■□□□□ 0.21
SAMM50-201ENST00000350028 PEX2P28328 305 aa16.39■□□□□ 0.21
SAMM50-201ENST00000350028 PIK3CGP48736 1102 aa16.39■□□□□ 0.21
SAMM50-201ENST00000350028 CDKL1Q00532 357 aa16.39■□□□□ 0.21
SAMM50-201ENST00000350028 RCAN2Q14206 197 aa16.39■□□□□ 0.21
SAMM50-201ENST00000350028 GBX1Q14549 363 aa16.39■□□□□ 0.21
SAMM50-201ENST00000350028 DHCR24Q15392 516 aa16.39■□□□□ 0.21
SAMM50-201ENST00000350028 SFT2D3Q587I9 215 aa16.39■□□□□ 0.21
SAMM50-201ENST00000350028 ARSIQ5FYB1 569 aa16.39■□□□□ 0.21
SAMM50-201ENST00000350028 ZNF697Q5TEC3 545 aa16.39■□□□□ 0.21
SAMM50-201ENST00000350028 SFRP1Q8N474 314 aa16.39■□□□□ 0.21
SAMM50-201ENST00000350028 FNDC5Q8NAU1 212 aa16.39■□□□□ 0.21
SAMM50-201ENST00000350028 CYB5D2Q8WUJ1 264 aa16.39■□□□□ 0.21
SAMM50-201ENST00000350028 ING5Q8WYH8 240 aa16.39■□□□□ 0.21
SAMM50-201ENST00000350028 ZNF707Q96C28 371 aaPredicted RBP16.39■□□□□ 0.21
SAMM50-201ENST00000350028 DUS3LQ96G46 650 aaKnown RBP16.39■□□□□ 0.21
SAMM50-201ENST00000350028 DCUN1D1Q96GG9 259 aa16.39■□□□□ 0.21
SAMM50-201ENST00000350028 NTMT1Q9BV86 223 aa16.39■□□□□ 0.21
SAMM50-201ENST00000350028 TRIM54Q9BYV2 358 aa16.39■□□□□ 0.21
SAMM50-201ENST00000350028 HEBP1Q9NRV9 189 aa16.39■□□□□ 0.21
SAMM50-201ENST00000350028 NFKBIL1Q9UBC1 381 aaPredicted RBP16.39■□□□□ 0.21
SAMM50-201ENST00000350028 DKK3Q9UBP4 350 aa16.39■□□□□ 0.21
SAMM50-201ENST00000350028 TMPRSS11EQ9UL52 423 aa16.39■□□□□ 0.21
SAMM50-201ENST00000350028 HCFC2Q9Y5Z7 792 aa16.39■□□□□ 0.21
SAMM50-201ENST00000350028 PIKFYVEQ9Y2I7 2098 aa16.39■□□□□ 0.21
SAMM50-201ENST00000350028 FAM234BA2RU67 622 aa16.39■□□□□ 0.21
SAMM50-201ENST00000350028 CFAP99D6REC4 459 aa16.39■□□□□ 0.21
SAMM50-201ENST00000350028 NUAK1O60285 661 aa16.39■□□□□ 0.21
SAMM50-201ENST00000350028 KATNA1O75449 491 aa16.39■□□□□ 0.21
SAMM50-201ENST00000350028 LEFTY1O75610 366 aa16.39■□□□□ 0.21
SAMM50-201ENST00000350028 C8GP07360 202 aa16.39■□□□□ 0.21
SAMM50-201ENST00000350028 CISD3P0C7P0 127 aa16.39■□□□□ 0.21
SAMM50-201ENST00000350028 ATP1B2P14415 290 aaPredicted RBP16.39■□□□□ 0.21
SAMM50-201ENST00000350028 TIMP2P16035 220 aa16.39■□□□□ 0.21
SAMM50-201ENST00000350028 WEE1P30291 646 aa16.39■□□□□ 0.21
SAMM50-201ENST00000350028 HTR6P50406 440 aa16.39■□□□□ 0.21
SAMM50-201ENST00000350028 POLR2JP52435 117 aaKnown RBP16.39■□□□□ 0.21
SAMM50-201ENST00000350028 RHDQ02161 417 aa16.39■□□□□ 0.21
SAMM50-201ENST00000350028 RALGDSQ12967 914 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms