RNA–Protein interactions for RNA: ENST00000348259.9

MRPL55-204, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-204ENST00000348259 CASC4Q6P4E1 433 aa9.6□□□□□ -0.87
MRPL55-204ENST00000348259 BORAQ6PGQ7 559 aa9.6□□□□□ -0.87
MRPL55-204ENST00000348259 TIFABQ6ZNK6 161 aa9.6□□□□□ -0.87
MRPL55-204ENST00000348259 CAPN12Q6ZSI9 719 aa9.6□□□□□ -0.87
MRPL55-204ENST00000348259 NLRP9Q7RTR0 991 aa9.6□□□□□ -0.87
MRPL55-204ENST00000348259 TTC7BQ86TV6 843 aa9.6□□□□□ -0.87
MRPL55-204ENST00000348259 ZSWIM9Q86XI8 627 aa9.6□□□□□ -0.87
MRPL55-204ENST00000348259 PTRH1Q86Y79 214 aaKnown RBP9.6□□□□□ -0.87
MRPL55-204ENST00000348259 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.6□□□□□ -0.87
MRPL55-204ENST00000348259 PLA2G15Q8NCC3 412 aa9.6□□□□□ -0.87
MRPL55-204ENST00000348259 HCAR2Q8TDS4 363 aa9.6□□□□□ -0.87
MRPL55-204ENST00000348259 SPOCK2Q92563 424 aa9.6□□□□□ -0.87
MRPL55-204ENST00000348259 PEX13Q92968 403 aa9.6□□□□□ -0.87
MRPL55-204ENST00000348259 MIB2Q96AX9 1013 aa9.6□□□□□ -0.87
MRPL55-204ENST00000348259 WDR92Q96MX6 357 aa9.6□□□□□ -0.87
MRPL55-204ENST00000348259 WRAP53Q9BUR4 548 aaKnown RBP9.6□□□□□ -0.87
MRPL55-204ENST00000348259 C1QTNF7Q9BXJ2 289 aa9.6□□□□□ -0.87
MRPL55-204ENST00000348259 FSD1LQ9BXM9 530 aa9.6□□□□□ -0.87
MRPL55-204ENST00000348259 CCDC134Q9H6E4 229 aa9.6□□□□□ -0.87
MRPL55-204ENST00000348259 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.6□□□□□ -0.87
MRPL55-204ENST00000348259 LHX3Q9UBR4 397 aa9.6□□□□□ -0.87
MRPL55-204ENST00000348259 CTNNAL1Q9UBT7 734 aa9.6□□□□□ -0.87
MRPL55-204ENST00000348259 ANAPC2Q9UJX6 822 aa9.6□□□□□ -0.87
MRPL55-204ENST00000348259 RIMKLBQ9ULI2 386 aa9.6□□□□□ -0.87
MRPL55-204ENST00000348259 ST14Q9Y5Y6 855 aa9.6□□□□□ -0.87
MRPL55-204ENST00000348259 RPS6KL1Q9Y6S9 549 aa9.6□□□□□ -0.87
MRPL55-204ENST00000348259 DOPEY1Q5JWR5 2465 aa9.6□□□□□ -0.87
MRPL55-204ENST00000348259 HIVEP3Q5T1R4 2406 aa9.6□□□□□ -0.87
MRPL55-204ENST00000348259 RP1L1Q8IWN7 2480 aaPredicted RBP9.59□□□□□ -0.87
MRPL55-204ENST00000348259 SHANK1Q9Y566 2161 aa9.59□□□□□ -0.87
MRPL55-204ENST00000348259 CREBBPQ92793 2442 aa9.59□□□□□ -0.87
MRPL55-204ENST00000348259 F5H423 210 aaPredicted RBP9.59□□□□□ -0.87
MRPL55-204ENST00000348259 STMND1H3BQB6 276 aa9.59□□□□□ -0.87
MRPL55-204ENST00000348259 TNFRSF10CO14798 259 aa9.59□□□□□ -0.87
MRPL55-204ENST00000348259 INSIG1O15503 277 aa9.59□□□□□ -0.87
MRPL55-204ENST00000348259 CPNE6O95741 557 aa9.59□□□□□ -0.87
MRPL55-204ENST00000348259 SNRPAP09012 282 aaKnown RBP9.59□□□□□ -0.87
MRPL55-204ENST00000348259 FGF3P11487 239 aaPredicted RBP9.59□□□□□ -0.87
MRPL55-204ENST00000348259 CTSEP14091 401 aa9.59□□□□□ -0.87
MRPL55-204ENST00000348259 LIFP15018 202 aa9.59□□□□□ -0.87
MRPL55-204ENST00000348259 BRAFP15056 766 aa9.59□□□□□ -0.87
MRPL55-204ENST00000348259 KRT15P19012 456 aa9.59□□□□□ -0.87
MRPL55-204ENST00000348259 HLA-DPA1P20036 260 aa9.59□□□□□ -0.87
MRPL55-204ENST00000348259 UGT1A3P35503 534 aa9.59□□□□□ -0.87
MRPL55-204ENST00000348259 CD86P42081 329 aa9.59□□□□□ -0.87
MRPL55-204ENST00000348259 CSNK1DP48730 415 aa9.59□□□□□ -0.87
MRPL55-204ENST00000348259 ATP1A2P50993 1020 aa9.59□□□□□ -0.87
MRPL55-204ENST00000348259 MAPK10P53779 464 aa9.59□□□□□ -0.87
MRPL55-204ENST00000348259 SLC18A2Q05940 514 aa9.59□□□□□ -0.87
MRPL55-204ENST00000348259 RALGDSQ12967 914 aa9.59□□□□□ -0.87
MRPL55-204ENST00000348259 SQSTM1Q13501 440 aa9.59□□□□□ -0.87
MRPL55-204ENST00000348259 INPP5AQ14642 412 aa9.59□□□□□ -0.87
MRPL55-204ENST00000348259 TMED2Q15363 201 aa9.59□□□□□ -0.87
MRPL55-204ENST00000348259 CYTH1Q15438 398 aa9.59□□□□□ -0.87
MRPL55-204ENST00000348259 TCEA2Q15560 299 aa9.59□□□□□ -0.87
MRPL55-204ENST00000348259 SLC1A5Q15758 541 aa9.59□□□□□ -0.87
MRPL55-204ENST00000348259 CLPPQ16740 277 aaPredicted RBP9.59□□□□□ -0.87
MRPL55-204ENST00000348259 TRMT10BQ6PF06 316 aaKnown RBP9.59□□□□□ -0.87
MRPL55-204ENST00000348259 ENPP7Q6UWV6 458 aa9.59□□□□□ -0.87
MRPL55-204ENST00000348259 LEKR1Q6ZMV7 388 aa9.59□□□□□ -0.87
MRPL55-204ENST00000348259 SH2D5Q6ZV89 423 aa9.59□□□□□ -0.87
MRPL55-204ENST00000348259 ZNF354CQ86Y25 554 aa9.59□□□□□ -0.87
MRPL55-204ENST00000348259 NRROSQ86YC3 692 aa9.59□□□□□ -0.87
MRPL55-204ENST00000348259 PELI3Q8N2H9 469 aa9.59□□□□□ -0.87
MRPL55-204ENST00000348259 FAM26EQ8N5C1 309 aa9.59□□□□□ -0.87
MRPL55-204ENST00000348259 BMPERQ8N8U9 685 aa9.59□□□□□ -0.87
MRPL55-204ENST00000348259 Q8N9G6 341 aaPredicted RBP9.59□□□□□ -0.87
MRPL55-204ENST00000348259 ZSCAN1Q8NBB4 408 aa9.59□□□□□ -0.87
MRPL55-204ENST00000348259 IPMKQ8NFU5 416 aa9.59□□□□□ -0.87
MRPL55-204ENST00000348259 CCL4L1Q8NHW4 92 aa9.59□□□□□ -0.87
MRPL55-204ENST00000348259 CXorf40AQ8TE69 158 aa9.59□□□□□ -0.87
MRPL55-204ENST00000348259 CERS2Q96G23 380 aa9.59□□□□□ -0.87
MRPL55-204ENST00000348259 SGSM3Q96HU1 749 aa9.59□□□□□ -0.87
MRPL55-204ENST00000348259 NUDCD1Q96RS6 583 aa9.59□□□□□ -0.87
MRPL55-204ENST00000348259 SMC6Q96SB8 1091 aa9.59□□□□□ -0.87
MRPL55-204ENST00000348259 NUDT22Q9BRQ3 303 aa9.59□□□□□ -0.87
MRPL55-204ENST00000348259 FICDQ9BVA6 458 aa9.59□□□□□ -0.87
MRPL55-204ENST00000348259 CINPQ9BW66 212 aaPredicted RBP9.59□□□□□ -0.87
MRPL55-204ENST00000348259 TMEM168Q9H0V1 697 aa9.59□□□□□ -0.87
MRPL55-204ENST00000348259 TRABDQ9H4I3 376 aa9.59□□□□□ -0.87
MRPL55-204ENST00000348259 SMYD2Q9NRG4 433 aa9.59□□□□□ -0.87
MRPL55-204ENST00000348259 NSMCE4AQ9NXX6 385 aa9.59□□□□□ -0.87
MRPL55-204ENST00000348259 UBP1Q9NZI7 540 aa9.59□□□□□ -0.87
MRPL55-204ENST00000348259 LRIT1Q9P2V4 623 aa9.59□□□□□ -0.87
MRPL55-204ENST00000348259 KLQ9UEF7 1012 aa9.59□□□□□ -0.87
MRPL55-204ENST00000348259 TBK1Q9UHD2 729 aa9.59□□□□□ -0.87
MRPL55-204ENST00000348259 DOLKQ9UPQ8 538 aa9.59□□□□□ -0.87
MRPL55-204ENST00000348259 OR1A2Q9Y585 309 aa9.59□□□□□ -0.87
MRPL55-204ENST00000348259 ZNF106Q9H2Y7 1883 aaKnown RBP9.59□□□□□ -0.87
MRPL55-204ENST00000348259 IGHV5-10-1A0A0J9YXX1 117 aa9.58□□□□□ -0.88
MRPL55-204ENST00000348259 TMEM120BA0PK00 339 aa9.58□□□□□ -0.88
MRPL55-204ENST00000348259 HEATR9A2RTY3 570 aa9.58□□□□□ -0.88
MRPL55-204ENST00000348259 MROH6A6NGR9 719 aa9.58□□□□□ -0.88
MRPL55-204ENST00000348259 CXorf49A8MYA2 514 aaPredicted RBP9.58□□□□□ -0.88
MRPL55-204ENST00000348259 TYROBPO43914 113 aa9.58□□□□□ -0.88
MRPL55-204ENST00000348259 PMPCBO75439 489 aa9.58□□□□□ -0.88
MRPL55-204ENST00000348259 TNFP01375 233 aa9.58□□□□□ -0.88
MRPL55-204ENST00000348259 MT-ND3P03897 115 aa9.58□□□□□ -0.88
MRPL55-204ENST00000348259 FUCA1P04066 466 aa9.58□□□□□ -0.88
MRPL55-204ENST00000348259 FGF1P05230 155 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms