RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 AFF3P51826 1226 aaKnown RBP18.64■□□□□ 0.57
CHMP4A-201ENST00000347519 OVGP1Q12889 678 aa18.64■□□□□ 0.57
CHMP4A-201ENST00000347519 INSCQ1MX18 579 aa18.64■□□□□ 0.57
CHMP4A-201ENST00000347519 PLEKHS1Q5SXH7 462 aa18.64■□□□□ 0.57
CHMP4A-201ENST00000347519 C16orf46Q6P387 395 aa18.64■□□□□ 0.57
CHMP4A-201ENST00000347519 PIWIL4Q7Z3Z4 852 aaKnown RBP18.64■□□□□ 0.57
CHMP4A-201ENST00000347519 DCP2Q8IU60 420 aaKnown RBP18.64■□□□□ 0.57
CHMP4A-201ENST00000347519 HM13Q8TCT9 377 aa18.64■□□□□ 0.57
CHMP4A-201ENST00000347519 SMC6Q96SB8 1091 aa18.64■□□□□ 0.57
CHMP4A-201ENST00000347519 TIMM29Q9BSF4 260 aa18.64■□□□□ 0.57
CHMP4A-201ENST00000347519 TSSK1BQ9BXA7 367 aa18.64■□□□□ 0.57
CHMP4A-201ENST00000347519 KLC4Q9NSK0 619 aa18.64■□□□□ 0.57
CHMP4A-201ENST00000347519 SENP1Q9P0U3 644 aa18.64■□□□□ 0.57
CHMP4A-201ENST00000347519 EMCNQ9ULC0 261 aa18.64■□□□□ 0.57
CHMP4A-201ENST00000347519 RUVBL2Q9Y230 463 aaKnown RBP18.64■□□□□ 0.57
CHMP4A-201ENST00000347519 ANKRD6Q9Y2G4 727 aa18.64■□□□□ 0.57
CHMP4A-201ENST00000347519 ACTL7BQ9Y614 415 aa18.64■□□□□ 0.57
CHMP4A-201ENST00000347519 DNMT3AQ9Y6K1 912 aaPredicted RBP18.64■□□□□ 0.57
CHMP4A-201ENST00000347519 DGKBQ9Y6T7 804 aa18.64■□□□□ 0.57
CHMP4A-201ENST00000347519 KNL1Q8NG31 2342 aa18.63■□□□□ 0.57
CHMP4A-201ENST00000347519 C17orf113A0A1B0GUU1 675 aa18.63■□□□□ 0.57
CHMP4A-201ENST00000347519 F8W8V4 182 aa18.63■□□□□ 0.57
CHMP4A-201ENST00000347519 TNFP01375 233 aa18.63■□□□□ 0.57
CHMP4A-201ENST00000347519 CD1DP15813 335 aa18.63■□□□□ 0.57
CHMP4A-201ENST00000347519 AK4P27144 223 aaPredicted RBP18.63■□□□□ 0.57
CHMP4A-201ENST00000347519 HK3P52790 923 aa18.63■□□□□ 0.57
CHMP4A-201ENST00000347519 TCF15Q12870 199 aa18.63■□□□□ 0.57
CHMP4A-201ENST00000347519 PARGQ86W56 976 aa18.63■□□□□ 0.57
CHMP4A-201ENST00000347519 NRROSQ86YC3 692 aa18.63■□□□□ 0.57
CHMP4A-201ENST00000347519 SYT12Q8IV01 421 aa18.63■□□□□ 0.57
CHMP4A-201ENST00000347519 PHACTR4Q8IZ21 702 aa18.63■□□□□ 0.57
CHMP4A-201ENST00000347519 APOPT1Q96IL0 206 aa18.63■□□□□ 0.57
CHMP4A-201ENST00000347519 CABS1Q96KC9 395 aa18.63■□□□□ 0.57
CHMP4A-201ENST00000347519 IRF2BPLQ9H1B7 796 aa18.63■□□□□ 0.57
CHMP4A-201ENST00000347519 SYTL2Q9HCH5 934 aa18.63■□□□□ 0.57
CHMP4A-201ENST00000347519 MED4Q9NPJ6 270 aa18.63■□□□□ 0.57
CHMP4A-201ENST00000347519 FAM53CQ9NYF3 392 aa18.63■□□□□ 0.57
CHMP4A-201ENST00000347519 TMEM216Q9P0N5 145 aa18.63■□□□□ 0.57
CHMP4A-201ENST00000347519 PATE3B3GLJ2 98 aa18.62■□□□□ 0.57
CHMP4A-201ENST00000347519 COPEO14579 308 aa18.62■□□□□ 0.57
CHMP4A-201ENST00000347519 ZBTB14O43829 449 aa18.62■□□□□ 0.57
CHMP4A-201ENST00000347519 SLCO2B1O94956 709 aa18.62■□□□□ 0.57
CHMP4A-201ENST00000347519 KLHL2O95198 593 aa18.62■□□□□ 0.57
CHMP4A-201ENST00000347519 APOA4P06727 396 aa18.62■□□□□ 0.57
CHMP4A-201ENST00000347519 GLRBP48167 497 aa18.62■□□□□ 0.57
CHMP4A-201ENST00000347519 IL2P60568 153 aa18.62■□□□□ 0.57
CHMP4A-201ENST00000347519 CTBSQ01459 385 aa18.62■□□□□ 0.57
CHMP4A-201ENST00000347519 DMPKQ09013 629 aa18.62■□□□□ 0.57
CHMP4A-201ENST00000347519 KIF19Q2TAC6 998 aa18.62■□□□□ 0.57
CHMP4A-201ENST00000347519 SYTL3Q4VX76 610 aa18.62■□□□□ 0.57
CHMP4A-201ENST00000347519 TBC1D1Q86TI0 1168 aaPredicted RBP18.62■□□□□ 0.57
CHMP4A-201ENST00000347519 ALYREFQ86V81 257 aaKnown RBP18.62■□□□□ 0.57
CHMP4A-201ENST00000347519 CNPY4Q8N129 248 aa18.62■□□□□ 0.57
CHMP4A-201ENST00000347519 NKAPQ8N5F7 415 aaKnown RBP18.62■□□□□ 0.57
CHMP4A-201ENST00000347519 ASZ1Q8WWH4 475 aa18.62■□□□□ 0.57
CHMP4A-201ENST00000347519 PTERQ96BW5 349 aa18.62■□□□□ 0.57
CHMP4A-201ENST00000347519 DNAJC28Q9NX36 388 aa18.62■□□□□ 0.57
CHMP4A-201ENST00000347519 MKS1Q9NXB0 559 aa18.62■□□□□ 0.57
CHMP4A-201ENST00000347519 SLC17A7Q9P2U7 560 aa18.62■□□□□ 0.57
CHMP4A-201ENST00000347519 SNX11Q9Y5W9 270 aa18.62■□□□□ 0.57
CHMP4A-201ENST00000347519 CDC7O00311 574 aa18.61■□□□□ 0.57
CHMP4A-201ENST00000347519 LIN7AO14910 233 aaPredicted RBP18.61■□□□□ 0.57
CHMP4A-201ENST00000347519 KPNA5O15131 536 aa18.61■□□□□ 0.57
CHMP4A-201ENST00000347519 CSF2P04141 144 aa18.61■□□□□ 0.57
CHMP4A-201ENST00000347519 GSTM1P09488 218 aa18.61■□□□□ 0.57
CHMP4A-201ENST00000347519 LTA4HP09960 611 aaKnown RBP18.61■□□□□ 0.57
CHMP4A-201ENST00000347519 GNSP15586 552 aa18.61■□□□□ 0.57
CHMP4A-201ENST00000347519 JUNDP17535 347 aa18.61■□□□□ 0.57
CHMP4A-201ENST00000347519 DGKAP23743 735 aa18.61■□□□□ 0.57
CHMP4A-201ENST00000347519 HPDP32754 393 aaPredicted RBP18.61■□□□□ 0.57
CHMP4A-201ENST00000347519 CRHR1P34998 444 aa18.61■□□□□ 0.57
CHMP4A-201ENST00000347519 CTSKP43235 329 aa18.61■□□□□ 0.57
CHMP4A-201ENST00000347519 C21orf59P57076 290 aa18.61■□□□□ 0.57
CHMP4A-201ENST00000347519 GSTM4Q03013 218 aa18.61■□□□□ 0.57
CHMP4A-201ENST00000347519 C1orf61Q13536 156 aa18.61■□□□□ 0.57
CHMP4A-201ENST00000347519 TEAD4Q15561 434 aa18.61■□□□□ 0.57
CHMP4A-201ENST00000347519 OR4D1Q15615 310 aa18.61■□□□□ 0.57
CHMP4A-201ENST00000347519 TTLL9Q3SXZ7 439 aa18.61■□□□□ 0.57
CHMP4A-201ENST00000347519 HSP90B2PQ58FF3 399 aa18.61■□□□□ 0.57
CHMP4A-201ENST00000347519 N4BP2L1Q5TBK1 243 aaPredicted RBP18.61■□□□□ 0.57
CHMP4A-201ENST00000347519 METRNLQ641Q3 311 aa18.61■□□□□ 0.57
CHMP4A-201ENST00000347519 SLC22A15Q8IZD6 547 aa18.61■□□□□ 0.57
CHMP4A-201ENST00000347519 GLMNQ92990 594 aa18.61■□□□□ 0.57
CHMP4A-201ENST00000347519 PDLIM5Q96HC4 596 aaKnown RBP18.61■□□□□ 0.57
CHMP4A-201ENST00000347519 DERL2Q9GZP9 239 aa18.61■□□□□ 0.57
CHMP4A-201ENST00000347519 OR52A5Q9H2C5 316 aa18.61■□□□□ 0.57
CHMP4A-201ENST00000347519 KCNK9Q9NPC2 374 aa18.61■□□□□ 0.57
CHMP4A-201ENST00000347519 ANKRD12Q6UB98 2062 aa18.6■□□□□ 0.57
CHMP4A-201ENST00000347519 NPEPPSL1A6NEC2 478 aa18.6■□□□□ 0.57
CHMP4A-201ENST00000347519 PRR5-ARHGAP8B1AHC4 643 aa18.6■□□□□ 0.57
CHMP4A-201ENST00000347519 GLRA3O75311 464 aa18.6■□□□□ 0.57
CHMP4A-201ENST00000347519 EML2O95834 649 aa18.6■□□□□ 0.57
CHMP4A-201ENST00000347519 SBK3P0C264 359 aa18.6■□□□□ 0.57
CHMP4A-201ENST00000347519 CBSLP0DN79 551 aa18.6■□□□□ 0.57
CHMP4A-201ENST00000347519 COL6A2P12110 1019 aa18.6■□□□□ 0.57
CHMP4A-201ENST00000347519 NME1P15531 152 aaKnown RBP18.6■□□□□ 0.57
CHMP4A-201ENST00000347519 RPA3P35244 121 aaPredicted RBP18.6■□□□□ 0.57
CHMP4A-201ENST00000347519 CBSP35520 551 aa18.6■□□□□ 0.57
CHMP4A-201ENST00000347519 SLC26A3P40879 764 aa18.6■□□□□ 0.57
CHMP4A-201ENST00000347519 KCNC1P48547 511 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms