RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 FAM71DQ8N9W8 422 aa12.15□□□□□ -0.46
SGCA-202ENST00000344627 TTC13Q8NBP0 860 aa12.15□□□□□ -0.46
SGCA-202ENST00000344627 ZFPM2Q8WW38 1151 aa12.15□□□□□ -0.46
SGCA-202ENST00000344627 KLHL6Q8WZ60 621 aa12.15□□□□□ -0.46
SGCA-202ENST00000344627 ALG3Q92685 438 aa12.15□□□□□ -0.46
SGCA-202ENST00000344627 STAMBPL1Q96FJ0 436 aa12.15□□□□□ -0.46
SGCA-202ENST00000344627 ZNF514Q96K75 400 aaPredicted RBP12.15□□□□□ -0.46
SGCA-202ENST00000344627 OR6C1Q96RD1 312 aa12.15□□□□□ -0.46
SGCA-202ENST00000344627 CD180Q99467 661 aa12.15□□□□□ -0.46
SGCA-202ENST00000344627 GORASP1Q9BQQ3 440 aa12.15□□□□□ -0.46
SGCA-202ENST00000344627 DESI2Q9BSY9 194 aa12.15□□□□□ -0.46
SGCA-202ENST00000344627 GPR87Q9BY21 358 aa12.15□□□□□ -0.46
SGCA-202ENST00000344627 WWP1Q9H0M0 922 aa12.15□□□□□ -0.46
SGCA-202ENST00000344627 EPN3Q9H201 632 aa12.15□□□□□ -0.46
SGCA-202ENST00000344627 PDE7BQ9NP56 450 aa12.15□□□□□ -0.46
SGCA-202ENST00000344627 SEMA5BQ9P283 1151 aa12.15□□□□□ -0.46
SGCA-202ENST00000344627 PADI1Q9ULC6 663 aa12.15□□□□□ -0.46
SGCA-202ENST00000344627 UBR5O95071 2799 aaPredicted RBP12.14□□□□□ -0.47
SGCA-202ENST00000344627 PRR19A6NJB7 356 aa12.14□□□□□ -0.47
SGCA-202ENST00000344627 CCL22O00626 93 aa12.14□□□□□ -0.47
SGCA-202ENST00000344627 KIF1CO43896 1103 aaKnown RBP12.14□□□□□ -0.47
SGCA-202ENST00000344627 ZNF189O75820 626 aaPredicted RBP12.14□□□□□ -0.47
SGCA-202ENST00000344627 TPH1P17752 444 aa12.14□□□□□ -0.47
SGCA-202ENST00000344627 ITGALP20701 1170 aa12.14□□□□□ -0.47
SGCA-202ENST00000344627 HADHAP40939 763 aa12.14□□□□□ -0.47
SGCA-202ENST00000344627 CAPZBP47756 277 aa12.14□□□□□ -0.47
SGCA-202ENST00000344627 ARL4DP49703 201 aa12.14□□□□□ -0.47
SGCA-202ENST00000344627 SH3BP2P78314 561 aa12.14□□□□□ -0.47
SGCA-202ENST00000344627 ACY1Q03154 408 aa12.14□□□□□ -0.47
SGCA-202ENST00000344627 SRSF1Q07955 248 aaKnown RBP eCLIP12.14□□□□□ -0.47
SGCA-202ENST00000344627 DMPKQ09013 629 aa12.14□□□□□ -0.47
SGCA-202ENST00000344627 ARMC6Q6NXE6 501 aa12.14□□□□□ -0.47
SGCA-202ENST00000344627 PTRH1Q86Y79 214 aaKnown RBP12.14□□□□□ -0.47
SGCA-202ENST00000344627 HPS6Q86YV9 775 aa12.14□□□□□ -0.47
SGCA-202ENST00000344627 APLFQ8IW19 511 aaPredicted RBP12.14□□□□□ -0.47
SGCA-202ENST00000344627 CFAP206Q8IYR0 622 aa12.14□□□□□ -0.47
SGCA-202ENST00000344627 LRRC57Q8N9N7 239 aa12.14□□□□□ -0.47
SGCA-202ENST00000344627 OR13C4Q8NGS5 318 aa12.14□□□□□ -0.47
SGCA-202ENST00000344627 GPR150Q8NGU9 434 aa12.14□□□□□ -0.47
SGCA-202ENST00000344627 OR8K5Q8NH50 307 aa12.14□□□□□ -0.47
SGCA-202ENST00000344627 THAP4Q8WY91 577 aa12.14□□□□□ -0.47
SGCA-202ENST00000344627 ABHD17AQ96GS6 310 aa12.14□□□□□ -0.47
SGCA-202ENST00000344627 C12orf66Q96MD2 445 aa12.14□□□□□ -0.47
SGCA-202ENST00000344627 ALS2CR12Q96Q35 445 aa12.14□□□□□ -0.47
SGCA-202ENST00000344627 ANKMY1Q9P2S6 941 aa12.14□□□□□ -0.47
SGCA-202ENST00000344627 KCNMB2Q9Y691 235 aa12.14□□□□□ -0.47
SGCA-202ENST00000344627 UBA6A0AVT1 1052 aaPredicted RBP12.13□□□□□ -0.47
SGCA-202ENST00000344627 CLEC18AA5D8T8 446 aa12.13□□□□□ -0.47
SGCA-202ENST00000344627 MGAT4DA6NG13 374 aa12.13□□□□□ -0.47
SGCA-202ENST00000344627 GOLGA6L6A8MZA4 724 aa12.13□□□□□ -0.47
SGCA-202ENST00000344627 MIF4GDA9UHW6 222 aaKnown RBP12.13□□□□□ -0.47
SGCA-202ENST00000344627 CFAP99D6REC4 459 aa12.13□□□□□ -0.47
SGCA-202ENST00000344627 PYCARD-AS1I3L0S3 204 aa12.13□□□□□ -0.47
SGCA-202ENST00000344627 SLC35G4P0C7Q5 338 aa12.13□□□□□ -0.47
SGCA-202ENST00000344627 MTHFD1P11586 935 aaKnown RBP12.13□□□□□ -0.47
SGCA-202ENST00000344627 NELFEP18615 380 aaKnown RBP12.13□□□□□ -0.47
SGCA-202ENST00000344627 VARSP26640 1264 aaKnown RBP12.13□□□□□ -0.47
SGCA-202ENST00000344627 OAS2P29728 719 aaKnown RBP12.13□□□□□ -0.47
SGCA-202ENST00000344627 DLSTP36957 453 aa12.13□□□□□ -0.47
SGCA-202ENST00000344627 CD97P48960 835 aa12.13□□□□□ -0.47
SGCA-202ENST00000344627 PARP6Q2NL67 630 aa12.13□□□□□ -0.47
SGCA-202ENST00000344627 DEFB109BQ30KR1 87 aa12.13□□□□□ -0.47
SGCA-202ENST00000344627 ZRANB3Q5FWF4 1079 aa12.13□□□□□ -0.47
SGCA-202ENST00000344627 METRNLQ641Q3 311 aa12.13□□□□□ -0.47
SGCA-202ENST00000344627 DUS1LQ6P1R4 473 aaKnown RBP12.13□□□□□ -0.47
SGCA-202ENST00000344627 C16orf46Q6P387 395 aa12.13□□□□□ -0.47
SGCA-202ENST00000344627 CLEC18BQ6UXF7 455 aa12.13□□□□□ -0.47
SGCA-202ENST00000344627 TAS2R42Q7RTR8 314 aa12.13□□□□□ -0.47
SGCA-202ENST00000344627 GAS2L3Q86XJ1 694 aa12.13□□□□□ -0.47
SGCA-202ENST00000344627 FAM26EQ8N5C1 309 aa12.13□□□□□ -0.47
SGCA-202ENST00000344627 TEX19Q8NA77 164 aa12.13□□□□□ -0.47
SGCA-202ENST00000344627 SIDT2Q8NBJ9 832 aaKnown RBP12.13□□□□□ -0.47
SGCA-202ENST00000344627 CLEC18CQ8NCF0 446 aa12.13□□□□□ -0.47
SGCA-202ENST00000344627 GALNT6Q8NCL4 622 aa12.13□□□□□ -0.47
SGCA-202ENST00000344627 ULK4Q96C45 1275 aa12.13□□□□□ -0.47
SGCA-202ENST00000344627 DNAJC1Q96KC8 554 aaKnown RBP12.13□□□□□ -0.47
SGCA-202ENST00000344627 INSM2Q96T92 566 aaPredicted RBP12.13□□□□□ -0.47
SGCA-202ENST00000344627 SMOXQ9NWM0 555 aa12.13□□□□□ -0.47
SGCA-202ENST00000344627 FEZ2Q9UHY8 353 aaPredicted RBP12.13□□□□□ -0.47
SGCA-202ENST00000344627 LNPEPQ9UIQ6 1025 aa12.13□□□□□ -0.47
SGCA-202ENST00000344627 ACSL5Q9ULC5 683 aa12.13□□□□□ -0.47
SGCA-202ENST00000344627 PCDHGB7Q9Y5F8 929 aa12.13□□□□□ -0.47
SGCA-202ENST00000344627 PIKFYVEQ9Y2I7 2098 aa12.13□□□□□ -0.47
SGCA-202ENST00000344627 A0A0U1RQJ8 604 aa12.12□□□□□ -0.47
SGCA-202ENST00000344627 KATNA1O75449 491 aa12.12□□□□□ -0.47
SGCA-202ENST00000344627 RFPL1O75677 317 aa12.12□□□□□ -0.47
SGCA-202ENST00000344627 KIAA0754O94854 1291 aa12.12□□□□□ -0.47
SGCA-202ENST00000344627 GP1BBP13224 206 aa12.12□□□□□ -0.47
SGCA-202ENST00000344627 ZNF28P17035 718 aa12.12□□□□□ -0.47
SGCA-202ENST00000344627 MC4RP32245 332 aa12.12□□□□□ -0.47
SGCA-202ENST00000344627 LMAN1P49257 510 aa12.12□□□□□ -0.47
SGCA-202ENST00000344627 ZNF140P52738 457 aaPredicted RBP12.12□□□□□ -0.47
SGCA-202ENST00000344627 PPP1CAP62136 330 aa12.12□□□□□ -0.47
SGCA-202ENST00000344627 XIAPP98170 497 aa12.12□□□□□ -0.47
SGCA-202ENST00000344627 POU6F1Q14863 301 aa12.12□□□□□ -0.47
SGCA-202ENST00000344627 DNTTIP2Q5QJE6 756 aaKnown RBP12.12□□□□□ -0.47
SGCA-202ENST00000344627 DENND5AQ6IQ26 1287 aa12.12□□□□□ -0.47
SGCA-202ENST00000344627 ZNF449Q6P9G9 518 aa12.12□□□□□ -0.47
SGCA-202ENST00000344627 SNX20Q7Z614 316 aa12.12□□□□□ -0.47
SGCA-202ENST00000344627 OR2L2Q8NH16 312 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms