RNA–Protein interactions for RNA: ENST00000341753.10

TRIM28-202, Transcript of tripartite motif containing 28, humanhuman

TSL 1 (best) BASIC

Gene TRIM28, Length 2,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-202ENST00000341753 GGT5P36269 586 aa22.06■■□□□ 1.12
TRIM28-202ENST00000341753 SUOXP51687 545 aa22.06■■□□□ 1.12
TRIM28-202ENST00000341753 STC1P52823 247 aa22.06■■□□□ 1.12
TRIM28-202ENST00000341753 NRG1Q02297 640 aaPredicted RBP22.06■■□□□ 1.12
TRIM28-202ENST00000341753 EMX1Q04741 257 aaPredicted RBP22.06■■□□□ 1.12
TRIM28-202ENST00000341753 LAPTM4AQ15012 233 aa22.06■■□□□ 1.12
TRIM28-202ENST00000341753 FXNQ16595 210 aa22.06■■□□□ 1.12
TRIM28-202ENST00000341753 GALNT5Q7Z7M9 940 aa22.06■■□□□ 1.12
TRIM28-202ENST00000341753 THUMPD3Q9BV44 507 aaKnown RBP22.06■■□□□ 1.12
TRIM28-202ENST00000341753 WDR12Q9GZL7 423 aaKnown RBP22.06■■□□□ 1.12
TRIM28-202ENST00000341753 IKZF5Q9H5V7 419 aa22.06■■□□□ 1.12
TRIM28-202ENST00000341753 POLR3HQ9Y535 204 aaPredicted RBP22.06■■□□□ 1.12
TRIM28-202ENST00000341753 MUSKO15146 869 aa22.05■■□□□ 1.12
TRIM28-202ENST00000341753 GMNNO75496 209 aa22.05■■□□□ 1.12
TRIM28-202ENST00000341753 PARNO95453 639 aaKnown RBP22.05■■□□□ 1.12
TRIM28-202ENST00000341753 RCVRNP35243 200 aa22.05■■□□□ 1.12
TRIM28-202ENST00000341753 GPRIN3Q6ZVF9 776 aa22.05■■□□□ 1.12
TRIM28-202ENST00000341753 ANKRD13BQ86YJ7 626 aa22.05■■□□□ 1.12
TRIM28-202ENST00000341753 SCML4Q8N228 414 aa22.05■■□□□ 1.12
TRIM28-202ENST00000341753 SLC47A1Q96FL8 570 aa22.05■■□□□ 1.12
TRIM28-202ENST00000341753 ABCC13Q9NSE7 274 aa22.05■■□□□ 1.12
TRIM28-202ENST00000341753 ZIM2Q9NZV7 527 aa22.05■■□□□ 1.12
TRIM28-202ENST00000341753 ERVK-18Q9QC07 812 aa22.05■■□□□ 1.12
TRIM28-202ENST00000341753 ACTL7AQ9Y615 435 aa22.05■■□□□ 1.12
TRIM28-202ENST00000341753 LOC100130705A0A1B0GUX0 176 aa22.05■■□□□ 1.12
TRIM28-202ENST00000341753 A0A1W2PQH9 124 aa22.05■■□□□ 1.12
TRIM28-202ENST00000341753 ZNF99A8MXY4 864 aaPredicted RBP22.05■■□□□ 1.12
TRIM28-202ENST00000341753 MITFO75030 526 aaPredicted RBP22.05■■□□□ 1.12
TRIM28-202ENST00000341753 KATNA1O75449 491 aa22.05■■□□□ 1.12
TRIM28-202ENST00000341753 E2F6O75461 281 aa22.05■■□□□ 1.12
TRIM28-202ENST00000341753 RPP40O75818 363 aaKnown RBP22.05■■□□□ 1.12
TRIM28-202ENST00000341753 CYP4B1P13584 511 aa22.05■■□□□ 1.12
TRIM28-202ENST00000341753 FMO3P31513 532 aa22.05■■□□□ 1.12
TRIM28-202ENST00000341753 HK3P52790 923 aa22.05■■□□□ 1.12
TRIM28-202ENST00000341753 MLLT6P55198 1093 aaPredicted RBP22.05■■□□□ 1.12
TRIM28-202ENST00000341753 PPP2R2BQ00005 443 aa22.05■■□□□ 1.12
TRIM28-202ENST00000341753 IL5RAQ01344 420 aa22.05■■□□□ 1.12
TRIM28-202ENST00000341753 IL1RL1Q01638 556 aa22.05■■□□□ 1.12
TRIM28-202ENST00000341753 RAD51Q06609 339 aa22.05■■□□□ 1.12
TRIM28-202ENST00000341753 ZCCHC7Q8N3Z6 543 aaKnown RBP22.05■■□□□ 1.12
TRIM28-202ENST00000341753 OR2T12Q8NG77 320 aa22.05■■□□□ 1.12
TRIM28-202ENST00000341753 RHNO1Q9BSD3 238 aa22.05■■□□□ 1.12
TRIM28-202ENST00000341753 SMOC2Q9H3U7 446 aa22.05■■□□□ 1.12
TRIM28-202ENST00000341753 SMPD4Q9NXE4 827 aa22.05■■□□□ 1.12
TRIM28-202ENST00000341753 GABRQQ9UN88 632 aa22.05■■□□□ 1.12
TRIM28-202ENST00000341753 NEUROG3Q9Y4Z2 214 aa22.05■■□□□ 1.12
TRIM28-202ENST00000341753 PMF1-BGLAPU3KQ54 211 aa22.05■■□□□ 1.12
TRIM28-202ENST00000341753 PRKD3O94806 890 aa22.04■■□□□ 1.12
TRIM28-202ENST00000341753 ERVPABLB-1P60509 514 aa22.04■■□□□ 1.12
TRIM28-202ENST00000341753 ISL1P61371 349 aa22.04■■□□□ 1.12
TRIM28-202ENST00000341753 KCNJ8Q15842 424 aa22.04■■□□□ 1.12
TRIM28-202ENST00000341753 IL27RAQ6UWB1 636 aa22.04■■□□□ 1.12
TRIM28-202ENST00000341753 CD300LGQ6UXG3 332 aa22.04■■□□□ 1.12
TRIM28-202ENST00000341753 FAR1Q8WVX9 515 aa22.04■■□□□ 1.12
TRIM28-202ENST00000341753 ACTR8Q9H981 624 aa22.04■■□□□ 1.12
TRIM28-202ENST00000341753 DYTNA2CJ06 578 aa22.04■■□□□ 1.12
TRIM28-202ENST00000341753 SYCE1LA8MT33 242 aa22.04■■□□□ 1.12
TRIM28-202ENST00000341753 TGM1P22735 817 aa22.04■■□□□ 1.12
TRIM28-202ENST00000341753 NCS1P62166 190 aa22.04■■□□□ 1.12
TRIM28-202ENST00000341753 MAPRE1Q15691 268 aaKnown RBP22.04■■□□□ 1.12
TRIM28-202ENST00000341753 LETMD1Q6P1Q0 360 aa22.04■■□□□ 1.12
TRIM28-202ENST00000341753 TXNDC11Q6PKC3 985 aa22.04■■□□□ 1.12
TRIM28-202ENST00000341753 MFSD4AQ8N468 514 aa22.04■■□□□ 1.12
TRIM28-202ENST00000341753 SIDT2Q8NBJ9 832 aaKnown RBP22.04■■□□□ 1.12
TRIM28-202ENST00000341753 ZNF641Q96N77 438 aaPredicted RBP22.04■■□□□ 1.12
TRIM28-202ENST00000341753 TSPAN18Q96SJ8 248 aa22.04■■□□□ 1.12
TRIM28-202ENST00000341753 DERL2Q9GZP9 239 aa22.04■■□□□ 1.12
TRIM28-202ENST00000341753 TAS2R13Q9NYV9 303 aa22.04■■□□□ 1.12
TRIM28-202ENST00000341753 CD274Q9NZQ7 290 aa22.04■■□□□ 1.12
TRIM28-202ENST00000341753 DNAJB9Q9UBS3 223 aa22.04■■□□□ 1.12
TRIM28-202ENST00000341753 POU2F3Q9UKI9 436 aa22.04■■□□□ 1.12
TRIM28-202ENST00000341753 PNMA8BQ9ULN7 279 aaPredicted RBP22.04■■□□□ 1.12
TRIM28-202ENST00000341753 PABPC1P11940 636 aaKnown RBP22.03■■□□□ 1.12
TRIM28-202ENST00000341753 PFKLP17858 780 aa22.03■■□□□ 1.12
TRIM28-202ENST00000341753 GRIK1P39086 918 aa22.03■■□□□ 1.12
TRIM28-202ENST00000341753 CRHR2Q13324 411 aa22.03■■□□□ 1.12
TRIM28-202ENST00000341753 NR6A1Q15406 480 aa22.03■■□□□ 1.12
TRIM28-202ENST00000341753 CYP20A1Q6UW02 462 aa22.03■■□□□ 1.12
TRIM28-202ENST00000341753 FRA10AC1Q70Z53 315 aa22.03■■□□□ 1.12
TRIM28-202ENST00000341753 ADCK1Q86TW2 530 aa22.03■■□□□ 1.12
TRIM28-202ENST00000341753 SLC22A16Q86VW1 577 aa22.03■■□□□ 1.12
TRIM28-202ENST00000341753 TTC30BQ8N4P2 665 aa22.03■■□□□ 1.12
TRIM28-202ENST00000341753 MCOLN3Q8TDD5 553 aa22.03■■□□□ 1.12
TRIM28-202ENST00000341753 TRIB2Q92519 343 aa22.03■■□□□ 1.12
TRIM28-202ENST00000341753 ZIC5Q96T25 663 aa22.03■■□□□ 1.12
TRIM28-202ENST00000341753 SLX1AQ9BQ83 275 aa22.03■■□□□ 1.12
TRIM28-202ENST00000341753 SARS2Q9NP81 518 aaKnown RBP22.03■■□□□ 1.12
TRIM28-202ENST00000341753 NIPSNAP3AQ9UFN0 247 aaPredicted RBP22.03■■□□□ 1.12
TRIM28-202ENST00000341753 LOC285095A0A1B0GVY8 99 aa22.03■■□□□ 1.12
TRIM28-202ENST00000341753 TSPAN3O60637 253 aa22.03■■□□□ 1.12
TRIM28-202ENST00000341753 DUSP11O75319 330 aaKnown RBP22.03■■□□□ 1.12
TRIM28-202ENST00000341753 MYO1DO94832 1006 aa22.03■■□□□ 1.12
TRIM28-202ENST00000341753 FTH1P02794 183 aa22.03■■□□□ 1.12
TRIM28-202ENST00000341753 CNPP09543 421 aaKnown RBP22.03■■□□□ 1.12
TRIM28-202ENST00000341753 ITIH1P19827 911 aa22.03■■□□□ 1.12
TRIM28-202ENST00000341753 TPTEP56180 551 aa22.03■■□□□ 1.12
TRIM28-202ENST00000341753 GRIK2Q13002 908 aa22.03■■□□□ 1.12
TRIM28-202ENST00000341753 SCN4BQ8IWT1 228 aa22.03■■□□□ 1.12
TRIM28-202ENST00000341753 SCAIQ8N9R8 606 aa22.03■■□□□ 1.12
TRIM28-202ENST00000341753 FAM162AQ96A26 154 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms