RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 AUP1Q9Y679 476 aa11.69□□□□□ -0.54
RTN3-203ENST00000341307 SCN10AQ9Y5Y9 1956 aa11.69□□□□□ -0.54
RTN3-203ENST00000341307 PLD2O14939 933 aa11.69□□□□□ -0.54
RTN3-203ENST00000341307 APOA1P02647 267 aa11.69□□□□□ -0.54
RTN3-203ENST00000341307 HOXD4P09016 255 aaPredicted RBP11.69□□□□□ -0.54
RTN3-203ENST00000341307 PNPLA4P41247 253 aa11.69□□□□□ -0.54
RTN3-203ENST00000341307 MNX1P50219 401 aaPredicted RBP11.69□□□□□ -0.54
RTN3-203ENST00000341307 GABARAPL2P60520 117 aa11.69□□□□□ -0.54
RTN3-203ENST00000341307 FAPQ12884 760 aa11.69□□□□□ -0.54
RTN3-203ENST00000341307 TAZQ16635 292 aa11.69□□□□□ -0.54
RTN3-203ENST00000341307 SAMD4BQ5PRF9 694 aaKnown RBP11.69□□□□□ -0.54
RTN3-203ENST00000341307 GARNL3Q5VVW2 1013 aa11.69□□□□□ -0.54
RTN3-203ENST00000341307 LAIR2Q6ISS4 152 aa11.69□□□□□ -0.54
RTN3-203ENST00000341307 ZNF517Q6ZMY9 492 aaPredicted RBP11.69□□□□□ -0.54
RTN3-203ENST00000341307 THAP5Q7Z6K1 395 aa11.69□□□□□ -0.54
RTN3-203ENST00000341307 UNC5BQ8IZJ1 945 aa11.69□□□□□ -0.54
RTN3-203ENST00000341307 CCNYL1Q8N7R7 359 aa11.69□□□□□ -0.54
RTN3-203ENST00000341307 B3GALNT2Q8NCR0 500 aa11.69□□□□□ -0.54
RTN3-203ENST00000341307 CHDHQ8NE62 594 aaPredicted RBP11.69□□□□□ -0.54
RTN3-203ENST00000341307 SPATA18Q8TC71 538 aa11.69□□□□□ -0.54
RTN3-203ENST00000341307 DEPDC1BQ8WUY9 529 aa11.69□□□□□ -0.54
RTN3-203ENST00000341307 TSNARE1Q96NA8 513 aa11.69□□□□□ -0.54
RTN3-203ENST00000341307 TMEM106CQ9BVX2 250 aa11.69□□□□□ -0.54
RTN3-203ENST00000341307 PRRG3Q9BZD7 231 aa11.69□□□□□ -0.54
RTN3-203ENST00000341307 ASPSCR1Q9BZE9 553 aa11.69□□□□□ -0.54
RTN3-203ENST00000341307 ANKHQ9HCJ1 492 aa11.69□□□□□ -0.54
RTN3-203ENST00000341307 SLC35C2Q9NQQ7 365 aa11.69□□□□□ -0.54
RTN3-203ENST00000341307 PDE10AQ9Y233 779 aa11.69□□□□□ -0.54
RTN3-203ENST00000341307 CDH23Q9H251 3354 aa11.69□□□□□ -0.54
RTN3-203ENST00000341307 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.68□□□□□ -0.54
RTN3-203ENST00000341307 CCDC78A2IDD5 438 aa11.68□□□□□ -0.54
RTN3-203ENST00000341307 ARL5CA6NH57 179 aa11.68□□□□□ -0.54
RTN3-203ENST00000341307 ZNF98A6NK75 572 aa11.68□□□□□ -0.54
RTN3-203ENST00000341307 I3L521 148 aa11.68□□□□□ -0.54
RTN3-203ENST00000341307 CHADO15335 359 aa11.68□□□□□ -0.54
RTN3-203ENST00000341307 POMCP01189 267 aa11.68□□□□□ -0.54
RTN3-203ENST00000341307 TRAPPC2P0DI81 140 aa11.68□□□□□ -0.54
RTN3-203ENST00000341307 TRAPPC2BP0DI82 140 aa11.68□□□□□ -0.54
RTN3-203ENST00000341307 ZNF30P17039 623 aa11.68□□□□□ -0.54
RTN3-203ENST00000341307 IL10P22301 178 aa11.68□□□□□ -0.54
RTN3-203ENST00000341307 FSHRP23945 695 aa11.68□□□□□ -0.54
RTN3-203ENST00000341307 DNAJB1P25685 340 aa11.68□□□□□ -0.54
RTN3-203ENST00000341307 CSTF2P33240 577 aaKnown RBP eCLIP11.68□□□□□ -0.54
RTN3-203ENST00000341307 MAGEA11P43364 429 aa11.68□□□□□ -0.54
RTN3-203ENST00000341307 NDUFV1P49821 464 aa11.68□□□□□ -0.54
RTN3-203ENST00000341307 BCAT1P54687 386 aa11.68□□□□□ -0.54
RTN3-203ENST00000341307 GALEQ14376 348 aa11.68□□□□□ -0.54
RTN3-203ENST00000341307 GPAT3Q53EU6 434 aa11.68□□□□□ -0.54
RTN3-203ENST00000341307 C8orf82Q6P1X6 216 aaPredicted RBP11.68□□□□□ -0.54
RTN3-203ENST00000341307 PRSS42Q7Z5A4 293 aa11.68□□□□□ -0.54
RTN3-203ENST00000341307 NRARPQ7Z6K4 114 aa11.68□□□□□ -0.54
RTN3-203ENST00000341307 P2RY8Q86VZ1 359 aa11.68□□□□□ -0.54
RTN3-203ENST00000341307 ZBTB44Q8NCP5 570 aa11.68□□□□□ -0.54
RTN3-203ENST00000341307 HASPINQ8TF76 798 aa11.68□□□□□ -0.54
RTN3-203ENST00000341307 ST8SIA2Q92186 375 aa11.68□□□□□ -0.54
RTN3-203ENST00000341307 RPL3LQ92901 407 aaKnown RBP11.68□□□□□ -0.54
RTN3-203ENST00000341307 FAF2Q96CS3 445 aa11.68□□□□□ -0.54
RTN3-203ENST00000341307 MYRFLQ96LU7 910 aa11.68□□□□□ -0.54
RTN3-203ENST00000341307 SNRNP25Q9BV90 132 aaKnown RBP11.68□□□□□ -0.54
RTN3-203ENST00000341307 FAM124BQ9H5Z6 455 aaPredicted RBP11.68□□□□□ -0.54
RTN3-203ENST00000341307 HPS4Q9NQG7 708 aa11.68□□□□□ -0.54
RTN3-203ENST00000341307 TMEM39AQ9NV64 488 aa11.68□□□□□ -0.54
RTN3-203ENST00000341307 EVA1BQ9NVM1 165 aa11.68□□□□□ -0.54
RTN3-203ENST00000341307 DCAF16Q9NXF7 216 aa11.68□□□□□ -0.54
RTN3-203ENST00000341307 ZNF639Q9UID6 485 aa11.68□□□□□ -0.54
RTN3-203ENST00000341307 PCDHB3Q9Y5E6 796 aa11.68□□□□□ -0.54
RTN3-203ENST00000341307 ZFC3H1O60293 1989 aaKnown RBP11.68□□□□□ -0.54
RTN3-203ENST00000341307 SYNJ2BP-COX16A0A087WUM0 186 aa11.68□□□□□ -0.54
RTN3-203ENST00000341307 LINC00862A6NCI5 91 aa11.68□□□□□ -0.54
RTN3-203ENST00000341307 METTL15A6NJ78 407 aa11.68□□□□□ -0.54
RTN3-203ENST00000341307 G3V2L1 256 aa11.68□□□□□ -0.54
RTN3-203ENST00000341307 PPM1BO75688 479 aa11.68□□□□□ -0.54
RTN3-203ENST00000341307 SERPINI2O75830 405 aa11.68□□□□□ -0.54
RTN3-203ENST00000341307 OLFM2O95897 454 aa11.68□□□□□ -0.54
RTN3-203ENST00000341307 AGXTP21549 392 aa11.68□□□□□ -0.54
RTN3-203ENST00000341307 SLC7A2P52569 658 aa11.68□□□□□ -0.54
RTN3-203ENST00000341307 PITX1P78337 314 aaPredicted RBP11.68□□□□□ -0.54
RTN3-203ENST00000341307 EMX1Q04741 257 aaPredicted RBP11.68□□□□□ -0.54
RTN3-203ENST00000341307 ADIGQ0VDE8 80 aa11.68□□□□□ -0.54
RTN3-203ENST00000341307 RIN1Q13671 783 aa11.68□□□□□ -0.54
RTN3-203ENST00000341307 MEP1AQ16819 746 aa11.68□□□□□ -0.54
RTN3-203ENST00000341307 CTU2Q2VPK5 515 aaKnown RBP11.68□□□□□ -0.54
RTN3-203ENST00000341307 PLEKHG6Q3KR16 790 aa11.68□□□□□ -0.54
RTN3-203ENST00000341307 C6orf141Q5SZD1 244 aa11.68□□□□□ -0.54
RTN3-203ENST00000341307 RAP1GAP2Q684P5 730 aa11.68□□□□□ -0.54
RTN3-203ENST00000341307 LAYNQ6UX15 382 aa11.68□□□□□ -0.54
RTN3-203ENST00000341307 PAQR9Q6ZVX9 377 aa11.68□□□□□ -0.54
RTN3-203ENST00000341307 ANKS3Q6ZW76 656 aa11.68□□□□□ -0.54
RTN3-203ENST00000341307 LIX1LQ8IVB5 337 aa11.68□□□□□ -0.54
RTN3-203ENST00000341307 MPP5Q8N3R9 675 aa11.68□□□□□ -0.54
RTN3-203ENST00000341307 CARNMT1Q8N4J0 409 aa11.68□□□□□ -0.54
RTN3-203ENST00000341307 VANGL1Q8TAA9 524 aaPredicted RBP11.68□□□□□ -0.54
RTN3-203ENST00000341307 FANK1Q8TC84 345 aa11.68□□□□□ -0.54
RTN3-203ENST00000341307 INTS12Q96CB8 462 aaKnown RBP11.68□□□□□ -0.54
RTN3-203ENST00000341307 MSANTD3Q96H12 275 aa11.68□□□□□ -0.54
RTN3-203ENST00000341307 NECTIN4Q96NY8 510 aa11.68□□□□□ -0.54
RTN3-203ENST00000341307 GATA5Q9BWX5 397 aaPredicted RBP11.68□□□□□ -0.54
RTN3-203ENST00000341307 ILKAPQ9H0C8 392 aaPredicted RBP11.68□□□□□ -0.54
RTN3-203ENST00000341307 LTB4R2Q9NPC1 389 aa11.68□□□□□ -0.54
RTN3-203ENST00000341307 ZC4H2Q9NQZ6 224 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms