RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 ACSS2Q9NR19 701 aa12.69□□□□□ -0.38
USP47-202ENST00000339865 BRWD1Q9NSI6 2320 aa12.69□□□□□ -0.38
USP47-202ENST00000339865 TEX14Q8IWB6 1497 aa12.69□□□□□ -0.38
USP47-202ENST00000339865 M0QX08 132 aa12.69□□□□□ -0.38
USP47-202ENST00000339865 M0R233 179 aa12.69□□□□□ -0.38
USP47-202ENST00000339865 MATKP42679 507 aa12.69□□□□□ -0.38
USP47-202ENST00000339865 NFKB2Q00653 900 aa12.69□□□□□ -0.38
USP47-202ENST00000339865 BTBD16Q32M84 506 aa12.69□□□□□ -0.38
USP47-202ENST00000339865 TRPS1Q9UHF7 1281 aa12.69□□□□□ -0.38
USP47-202ENST00000339865 KDM6AO15550 1401 aaPredicted RBP12.69□□□□□ -0.38
USP47-202ENST00000339865 UBE2Q2LH0YL09 131 aa12.69□□□□□ -0.38
USP47-202ENST00000339865 PLD2O14939 933 aa12.69□□□□□ -0.38
USP47-202ENST00000339865 CSTBP04080 98 aaKnown RBP12.69□□□□□ -0.38
USP47-202ENST00000339865 ITGA2BP08514 1039 aa12.69□□□□□ -0.38
USP47-202ENST00000339865 HOXB8P17481 243 aaPredicted RBP12.69□□□□□ -0.38
USP47-202ENST00000339865 GRK6P43250 576 aa12.69□□□□□ -0.38
USP47-202ENST00000339865 PLGLB1Q02325 96 aa12.69□□□□□ -0.38
USP47-202ENST00000339865 TKFCQ3LXA3 575 aa12.69□□□□□ -0.38
USP47-202ENST00000339865 FAM35AQ86V20 835 aa12.69□□□□□ -0.38
USP47-202ENST00000339865 GJD3Q8N144 294 aa12.69□□□□□ -0.38
USP47-202ENST00000339865 OTUB2Q96DC9 234 aa12.69□□□□□ -0.38
USP47-202ENST00000339865 GPATCH8Q9UKJ3 1502 aaKnown RBP12.69□□□□□ -0.38
USP47-202ENST00000339865 ZNF705FA8MVS1 300 aaPredicted RBP12.69□□□□□ -0.38
USP47-202ENST00000339865 SFTPBP07988 381 aa12.69□□□□□ -0.38
USP47-202ENST00000339865 ZNF286BP0CG31 522 aa12.69□□□□□ -0.38
USP47-202ENST00000339865 ZNF705DP0CH99 300 aaPredicted RBP12.69□□□□□ -0.38
USP47-202ENST00000339865 ZNF705BP0CI00 300 aaPredicted RBP12.69□□□□□ -0.38
USP47-202ENST00000339865 CETPP11597 493 aa12.69□□□□□ -0.38
USP47-202ENST00000339865 VWA5B1Q5TIE3 1220 aa12.69□□□□□ -0.38
USP47-202ENST00000339865 MOXD1Q6UVY6 613 aa12.69□□□□□ -0.38
USP47-202ENST00000339865 SPATA19Q7Z5L4 167 aa12.69□□□□□ -0.38
USP47-202ENST00000339865 SMPDL3BQ92485 455 aa12.69□□□□□ -0.38
USP47-202ENST00000339865 KAT8Q9H7Z6 458 aaKnown RBP12.69□□□□□ -0.38
USP47-202ENST00000339865 TMEM184CQ9NVA4 438 aa12.69□□□□□ -0.38
USP47-202ENST00000339865 DAPL1A0PJW8 107 aa12.68□□□□□ -0.38
USP47-202ENST00000339865 SLC15A1P46059 708 aa12.68□□□□□ -0.38
USP47-202ENST00000339865 SLC3A1Q07837 685 aa12.68□□□□□ -0.38
USP47-202ENST00000339865 GCNT6Q5T4J0 391 aa12.68□□□□□ -0.38
USP47-202ENST00000339865 SV2AQ7L0J3 742 aa12.68□□□□□ -0.38
USP47-202ENST00000339865 RIOX2Q8IUF8 465 aa12.68□□□□□ -0.38
USP47-202ENST00000339865 ZMIZ2Q8NF64 920 aa12.68□□□□□ -0.38
USP47-202ENST00000339865 OR8S1Q8NH09 359 aa12.68□□□□□ -0.38
USP47-202ENST00000339865 DPF1Q92782 380 aa12.68□□□□□ -0.38
USP47-202ENST00000339865 SCN2AQ99250 2005 aa12.68□□□□□ -0.38
USP47-202ENST00000339865 CPA4Q9UI42 421 aa12.68□□□□□ -0.38
USP47-202ENST00000339865 RAB21Q9UL25 225 aa12.68□□□□□ -0.38
USP47-202ENST00000339865 SH2B3Q9UQQ2 575 aa12.68□□□□□ -0.38
USP47-202ENST00000339865 A0A0A0MRY4 1105 aa12.68□□□□□ -0.38
USP47-202ENST00000339865 E7EQ34 232 aa12.68□□□□□ -0.38
USP47-202ENST00000339865 ARPC2O15144 300 aa12.68□□□□□ -0.38
USP47-202ENST00000339865 ZNF254O75437 659 aa12.68□□□□□ -0.38
USP47-202ENST00000339865 KLHL22Q53GT1 634 aa12.68□□□□□ -0.38
USP47-202ENST00000339865 XKR4Q5GH76 650 aa12.68□□□□□ -0.38
USP47-202ENST00000339865 FAM46CQ5VWP2 391 aa12.68□□□□□ -0.38
USP47-202ENST00000339865 LRTOMTQ8WZ04 291 aa12.68□□□□□ -0.38
USP47-202ENST00000339865 SPATA13Q96N96 652 aa12.68□□□□□ -0.38
USP47-202ENST00000339865 BBIP1A8MTZ0 92 aa12.68□□□□□ -0.38
USP47-202ENST00000339865 LYPLA1O75608 230 aaPredicted RBP12.68□□□□□ -0.38
USP47-202ENST00000339865 ZNF35P13682 527 aa12.68□□□□□ -0.38
USP47-202ENST00000339865 CCNFP41002 786 aa12.68□□□□□ -0.38
USP47-202ENST00000339865 DDR1Q08345 913 aa12.68□□□□□ -0.38
USP47-202ENST00000339865 EPHA10Q5JZY3 1008 aa12.68□□□□□ -0.38
USP47-202ENST00000339865 AKR1C8PQ5T2L2 129 aa12.68□□□□□ -0.38
USP47-202ENST00000339865 C3orf58Q8NDZ4 430 aa12.68□□□□□ -0.38
USP47-202ENST00000339865 ACMSDQ8TDX5 336 aa12.68□□□□□ -0.38
USP47-202ENST00000339865 DDX1Q92499 740 aaKnown RBP12.68□□□□□ -0.38
USP47-202ENST00000339865 CELF1Q92879 486 aaKnown RBP12.68□□□□□ -0.38
USP47-202ENST00000339865 ADAM7Q9H2U9 754 aa12.68□□□□□ -0.38
USP47-202ENST00000339865 SNX15Q9NRS6 342 aa12.68□□□□□ -0.38
USP47-202ENST00000339865 ZNF518AQ6AHZ1 1483 aa12.68□□□□□ -0.38
USP47-202ENST00000339865 SCAMP3O14828 347 aaKnown RBP12.68□□□□□ -0.38
USP47-202ENST00000339865 ADAMDEC1O15204 470 aa12.68□□□□□ -0.38
USP47-202ENST00000339865 ACOX3O15254 700 aa12.68□□□□□ -0.38
USP47-202ENST00000339865 WFS1O76024 890 aa12.68□□□□□ -0.38
USP47-202ENST00000339865 SLC35G4P0C7Q5 338 aa12.68□□□□□ -0.38
USP47-202ENST00000339865 PEPDP12955 493 aa12.68□□□□□ -0.38
USP47-202ENST00000339865 PEX2P28328 305 aa12.68□□□□□ -0.38
USP47-202ENST00000339865 DGKZQ13574 1117 aa12.68□□□□□ -0.38
USP47-202ENST00000339865 FAM151BQ6UXP7 276 aa12.68□□□□□ -0.38
USP47-202ENST00000339865 CAND1Q86VP6 1230 aaKnown RBP12.68□□□□□ -0.38
USP47-202ENST00000339865 CEP97Q8IW35 865 aa12.68□□□□□ -0.38
USP47-202ENST00000339865 OR2AJ1Q8NGZ0 328 aa12.68□□□□□ -0.38
USP47-202ENST00000339865 CNDP2Q96KP4 475 aaKnown RBP12.68□□□□□ -0.38
USP47-202ENST00000339865 MFSD14AQ96MC6 490 aa12.68□□□□□ -0.38
USP47-202ENST00000339865 GDAP2Q9NXN4 497 aa12.68□□□□□ -0.38
USP47-202ENST00000339865 MRPS33Q9Y291 106 aaKnown RBP12.68□□□□□ -0.38
USP47-202ENST00000339865 TEX13DA0A0J9YY54 714 aaPredicted RBP12.68□□□□□ -0.38
USP47-202ENST00000339865 SLC25A14O95258 325 aaPredicted RBP12.68□□□□□ -0.38
USP47-202ENST00000339865 H6PDO95479 791 aa12.68□□□□□ -0.38
USP47-202ENST00000339865 APOC3P02656 99 aa12.68□□□□□ -0.38
USP47-202ENST00000339865 IL7RP16871 459 aa12.68□□□□□ -0.38
USP47-202ENST00000339865 KDELR1P24390 212 aa12.68□□□□□ -0.38
USP47-202ENST00000339865 CLCN2P51788 898 aa12.68□□□□□ -0.38
USP47-202ENST00000339865 AQP4P55087 323 aa12.68□□□□□ -0.38
USP47-202ENST00000339865 MOGSQ13724 837 aa12.68□□□□□ -0.38
USP47-202ENST00000339865 PUS10Q3MIT2 529 aaKnown RBP12.68□□□□□ -0.38
USP47-202ENST00000339865 LHFPL3Q86UP9 236 aa12.68□□□□□ -0.38
USP47-202ENST00000339865 ARHGAP12Q8IWW6 846 aa12.68□□□□□ -0.38
USP47-202ENST00000339865 C7orf61Q8IZ16 206 aa12.68□□□□□ -0.38
USP47-202ENST00000339865 HDAC10Q969S8 669 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms