RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 MRGBPQ9NV56 204 aa15.9■□□□□ 0.14
SCARB1-202ENST00000339570 MARCH2Q9P0N8 246 aa15.9■□□□□ 0.14
SCARB1-202ENST00000339570 ERVK-18Q9QC07 812 aa15.9■□□□□ 0.14
SCARB1-202ENST00000339570 ABCB7O75027 752 aa15.9■□□□□ 0.14
SCARB1-202ENST00000339570 UROSP10746 265 aa15.9■□□□□ 0.14
SCARB1-202ENST00000339570 ZFP36L2P47974 494 aaKnown RBP15.9■□□□□ 0.14
SCARB1-202ENST00000339570 GALNT1Q10472 559 aaPredicted RBP15.9■□□□□ 0.14
SCARB1-202ENST00000339570 SETMARQ53H47 684 aaPredicted RBP15.9■□□□□ 0.14
SCARB1-202ENST00000339570 C6orf141Q5SZD1 244 aa15.9■□□□□ 0.14
SCARB1-202ENST00000339570 MSANTD2Q6P1R3 559 aa15.9■□□□□ 0.14
SCARB1-202ENST00000339570 ZNF280BQ86YH2 543 aa15.9■□□□□ 0.14
SCARB1-202ENST00000339570 ALDH16A1Q8IZ83 802 aa15.9■□□□□ 0.14
SCARB1-202ENST00000339570 MDGA1Q8NFP4 955 aa15.9■□□□□ 0.14
SCARB1-202ENST00000339570 SLC52A3Q9NQ40 469 aa15.9■□□□□ 0.14
SCARB1-202ENST00000339570 HPS4Q9NQG7 708 aa15.9■□□□□ 0.14
SCARB1-202ENST00000339570 RIC8BQ9NVN3 520 aa15.9■□□□□ 0.14
SCARB1-202ENST00000339570 WDR70Q9NW82 654 aa15.9■□□□□ 0.14
SCARB1-202ENST00000339570 MTRRQ9UBK8 725 aa15.9■□□□□ 0.14
SCARB1-202ENST00000339570 MED16Q9Y2X0 877 aa15.9■□□□□ 0.14
SCARB1-202ENST00000339570 hCG_2039718K7EN88 272 aa15.89■□□□□ 0.13
SCARB1-202ENST00000339570 EEDO75530 441 aaKnown RBP15.89■□□□□ 0.13
SCARB1-202ENST00000339570 MATN4O95460 622 aa15.89■□□□□ 0.13
SCARB1-202ENST00000339570 HTR1AP08908 422 aa15.89■□□□□ 0.13
SCARB1-202ENST00000339570 CDH1P12830 882 aa15.89■□□□□ 0.13
SCARB1-202ENST00000339570 CASP9P55211 416 aa15.89■□□□□ 0.13
SCARB1-202ENST00000339570 MRPS6P82932 125 aaKnown RBP15.89■□□□□ 0.13
SCARB1-202ENST00000339570 OR7A2PQ8NGA2 310 aa15.89■□□□□ 0.13
SCARB1-202ENST00000339570 NODALQ96S42 347 aa15.89■□□□□ 0.13
SCARB1-202ENST00000339570 MARCH7Q9H992 704 aa15.89■□□□□ 0.13
SCARB1-202ENST00000339570 PAK1IP1Q9NWT1 392 aaPredicted RBP15.89■□□□□ 0.13
SCARB1-202ENST00000339570 CDH7Q9ULB5 785 aa15.89■□□□□ 0.13
SCARB1-202ENST00000339570 PADI3Q9ULW8 664 aa15.89■□□□□ 0.13
SCARB1-202ENST00000339570 ERGIC3Q9Y282 383 aa15.89■□□□□ 0.13
SCARB1-202ENST00000339570 PCDHGA4Q9Y5G9 962 aa15.89■□□□□ 0.13
SCARB1-202ENST00000339570 B4GALT3O60512 393 aa15.89■□□□□ 0.13
SCARB1-202ENST00000339570 NBNO60934 754 aa15.89■□□□□ 0.13
SCARB1-202ENST00000339570 SEC22BO75396 215 aa15.89■□□□□ 0.13
SCARB1-202ENST00000339570 VPS26AO75436 327 aa15.89■□□□□ 0.13
SCARB1-202ENST00000339570 TTKP33981 857 aa15.89■□□□□ 0.13
SCARB1-202ENST00000339570 HPCAL1P37235 193 aa15.89■□□□□ 0.13
SCARB1-202ENST00000339570 IL2P60568 153 aa15.89■□□□□ 0.13
SCARB1-202ENST00000339570 TRIP4Q15650 581 aaPredicted RBP15.89■□□□□ 0.13
SCARB1-202ENST00000339570 INAQ16352 499 aa15.89■□□□□ 0.13
SCARB1-202ENST00000339570 DPY19L1Q2PZI1 675 aa15.89■□□□□ 0.13
SCARB1-202ENST00000339570 C10orf111Q8N326 155 aa15.89■□□□□ 0.13
SCARB1-202ENST00000339570 CHDHQ8NE62 594 aaPredicted RBP15.89■□□□□ 0.13
SCARB1-202ENST00000339570 TFB2MQ9H5Q4 396 aaKnown RBP15.89■□□□□ 0.13
SCARB1-202ENST00000339570 SLC6A13Q9NSD5 602 aa15.89■□□□□ 0.13
SCARB1-202ENST00000339570 TBCCD1Q9NVR7 557 aa15.89■□□□□ 0.13
SCARB1-202ENST00000339570 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.89■□□□□ 0.13
SCARB1-202ENST00000339570 UPK1AO00322 258 aa15.89■□□□□ 0.13
SCARB1-202ENST00000339570 CHRNA1P02708 482 aa15.89■□□□□ 0.13
SCARB1-202ENST00000339570 RAP2AP10114 183 aa15.89■□□□□ 0.13
SCARB1-202ENST00000339570 ZNF12P17014 697 aa15.89■□□□□ 0.13
SCARB1-202ENST00000339570 DNAJB1P25685 340 aa15.89■□□□□ 0.13
SCARB1-202ENST00000339570 CYP2C18P33260 490 aa15.89■□□□□ 0.13
SCARB1-202ENST00000339570 RCVRNP35243 200 aa15.89■□□□□ 0.13
SCARB1-202ENST00000339570 MAPKAPK3Q16644 382 aa15.89■□□□□ 0.13
SCARB1-202ENST00000339570 SYT16Q17RD7 645 aa15.89■□□□□ 0.13
SCARB1-202ENST00000339570 ZCCHC7Q8N3Z6 543 aaKnown RBP15.89■□□□□ 0.13
SCARB1-202ENST00000339570 Q8N9G6 341 aaPredicted RBP15.89■□□□□ 0.13
SCARB1-202ENST00000339570 BRSK1Q8TDC3 778 aa15.89■□□□□ 0.13
SCARB1-202ENST00000339570 MCOLN3Q8TDD5 553 aa15.89■□□□□ 0.13
SCARB1-202ENST00000339570 IPPKQ9H8X2 491 aa15.89■□□□□ 0.13
SCARB1-202ENST00000339570 TSC2P49815 1807 aa15.89■□□□□ 0.13
SCARB1-202ENST00000339570 RBM47A0AV96 593 aaKnown RBP15.88■□□□□ 0.13
SCARB1-202ENST00000339570 TNPO2O14787 897 aaKnown RBP15.88■□□□□ 0.13
SCARB1-202ENST00000339570 PAPSS2O95340 614 aaPredicted RBP15.88■□□□□ 0.13
SCARB1-202ENST00000339570 SERPINA1P01009 418 aa15.88■□□□□ 0.13
SCARB1-202ENST00000339570 IGLV3-25P01717 112 aa15.88■□□□□ 0.13
SCARB1-202ENST00000339570 EMX2Q04743 252 aa15.88■□□□□ 0.13
SCARB1-202ENST00000339570 TAF10Q12962 218 aa15.88■□□□□ 0.13
SCARB1-202ENST00000339570 RAPSNQ13702 412 aa15.88■□□□□ 0.13
SCARB1-202ENST00000339570 CRY1Q16526 586 aa15.88■□□□□ 0.13
SCARB1-202ENST00000339570 CPSF6Q16630 551 aaKnown RBP eCLIP15.88■□□□□ 0.13
SCARB1-202ENST00000339570 GDF6Q6KF10 455 aaPredicted RBP15.88■□□□□ 0.13
SCARB1-202ENST00000339570 RAB2BQ8WUD1 216 aa15.88■□□□□ 0.13
SCARB1-202ENST00000339570 TSSK3Q96PN8 268 aa15.88■□□□□ 0.13
SCARB1-202ENST00000339570 ARNT2Q9HBZ2 717 aa15.88■□□□□ 0.13
SCARB1-202ENST00000339570 USP34Q70CQ2 3546 aa15.88■□□□□ 0.13
SCARB1-202ENST00000339570 FAM234BA2RU67 622 aa15.88■□□□□ 0.13
SCARB1-202ENST00000339570 MLYCDO95822 493 aa15.88■□□□□ 0.13
SCARB1-202ENST00000339570 INHBBP09529 407 aa15.88■□□□□ 0.13
SCARB1-202ENST00000339570 MAGEA8P43361 318 aa15.88■□□□□ 0.13
SCARB1-202ENST00000339570 C6orf183Q5T699 404 aa15.88■□□□□ 0.13
SCARB1-202ENST00000339570 FAM171BQ6P995 826 aa15.88■□□□□ 0.13
SCARB1-202ENST00000339570 DLEU7Q6UYE1 221 aa15.88■□□□□ 0.13
SCARB1-202ENST00000339570 PAGE2Q7Z2X7 111 aa15.88■□□□□ 0.13
SCARB1-202ENST00000339570 SPATA19Q7Z5L4 167 aa15.88■□□□□ 0.13
SCARB1-202ENST00000339570 CINPQ9BW66 212 aaPredicted RBP15.88■□□□□ 0.13
SCARB1-202ENST00000339570 YIPF2Q9BWQ6 316 aa15.88■□□□□ 0.13
SCARB1-202ENST00000339570 FBXO10Q9UK96 956 aa15.88■□□□□ 0.13
SCARB1-202ENST00000339570 NT5C1B-RDH14C9J2C7 533 aa15.88■□□□□ 0.13
SCARB1-202ENST00000339570 STX7O15400 261 aaKnown RBP15.88■□□□□ 0.13
SCARB1-202ENST00000339570 RHOQP17081 205 aa15.88■□□□□ 0.13
SCARB1-202ENST00000339570 NEK2P51955 445 aa15.88■□□□□ 0.13
SCARB1-202ENST00000339570 EEFSECP57772 596 aaKnown RBP15.88■□□□□ 0.13
SCARB1-202ENST00000339570 SLC14A2Q15849 920 aa15.88■□□□□ 0.13
SCARB1-202ENST00000339570 SH3YL1Q96HL8 342 aaPredicted RBP15.88■□□□□ 0.13
SCARB1-202ENST00000339570 BRCA1P38398 1863 aaKnown RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms