RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 OTULINQ96BN8 352 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 WRAP53Q9BUR4 548 aaKnown RBP6.2□□□□□ -1.42
PRKDC-202ENST00000338368 IMP3Q9NV31 184 aaKnown RBP6.2□□□□□ -1.42
PRKDC-202ENST00000338368 BTAF1O14981 1849 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 POLR2AP24928 1970 aaKnown RBP6.2□□□□□ -1.42
PRKDC-202ENST00000338368 HMGCLP35914 325 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 APCDD1Q8J025 514 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 RHEBL1Q8TAI7 183 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 FERD3LQ96RJ6 166 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 SPHK2Q9NRA0 654 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 EURLQ9NYK6 297 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 ERAL1O75616 437 aaKnown RBP6.2□□□□□ -1.42
PRKDC-202ENST00000338368 CD1DP15813 335 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 TTKP33981 857 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 FAM189BP81408 668 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 C22orf39Q6P5X5 142 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 CYP4V2Q6ZWL3 525 aaPredicted RBP6.2□□□□□ -1.42
PRKDC-202ENST00000338368 CHST15Q7LFX5 561 aaPredicted RBP6.2□□□□□ -1.42
PRKDC-202ENST00000338368 REEP1Q9H902 201 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 SAMD4AQ9UPU9 718 aaKnown RBP6.2□□□□□ -1.42
PRKDC-202ENST00000338368 GPSM3Q9Y4H4 160 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 TEX28O15482 410 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 PRKAG1P54619 331 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 MTTPP55157 894 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 MAPK15Q8TD08 544 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 WFIKKN2Q8TEU8 576 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 CEP295NLQ96MC4 621 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 SLC7A5P2Q9GIP4 190 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 KLHL28Q9NXS3 571 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 AQP12BA6NM10 295 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 PCSK2P16519 638 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 HNF1BP35680 557 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 RPL3P39023 403 aaKnown RBP6.19□□□□□ -1.42
PRKDC-202ENST00000338368 RPL34P49207 117 aaKnown RBP6.19□□□□□ -1.42
PRKDC-202ENST00000338368 RHDQ02161 417 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 PHKG1Q16816 387 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 LIN52Q52LA3 116 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 KCTD11Q693B1 232 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 ZNF783Q6ZMS7 281 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 Q6ZVL8 140 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 AQP12AQ8IXF9 295 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 KDM1BQ8NB78 822 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 GLB1L3Q8NCI6 653 aaPredicted RBP6.19□□□□□ -1.42
PRKDC-202ENST00000338368 ACVR1CQ8NER5 493 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 BBS4Q96RK4 519 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 KCNK13Q9HB14 408 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 SLCO3A1Q9UIG8 710 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 PPM1HQ9ULR3 514 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 DNTTP04053 509 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 PRSS56P0CW18 603 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 GSSP48637 474 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 MCCD1P59942 119 aaPredicted RBP6.19□□□□□ -1.42
PRKDC-202ENST00000338368 UNC50Q53HI1 259 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 FGD3Q5JSP0 725 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 LY6G5CQ5SRR4 150 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 KIAA1324Q6UXG2 1013 aaKnown RBP6.19□□□□□ -1.42
PRKDC-202ENST00000338368 CANT1Q8WVQ1 401 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 IRF7Q92985 503 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 DACT3Q96B18 629 aaPredicted RBP6.19□□□□□ -1.42
PRKDC-202ENST00000338368 SMG9Q9H0W8 520 aaKnown RBP6.19□□□□□ -1.42
PRKDC-202ENST00000338368 RAD21L1Q9H4I0 556 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 CNOT3O75175 753 aaKnown RBP6.19□□□□□ -1.42
PRKDC-202ENST00000338368 RFX3P48380 749 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 CREB5Q02930 508 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 FPGSQ05932 587 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 CPA6Q8N4T0 437 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 WDR83Q9BRX9 315 aaKnown RBP6.19□□□□□ -1.42
PRKDC-202ENST00000338368 MSRAQ9UJ68 235 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 SSC5DA1L4H1 1573 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 FAM234BA2RU67 622 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 GPM6BQ13491 265 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 LRRC66Q68CR7 880 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 AHI1Q8N157 1196 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 PNPT1Q8TCS8 783 aaKnown RBP6.19□□□□□ -1.42
PRKDC-202ENST00000338368 MZB1Q8WU39 189 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 PPCDCQ96CD2 204 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 ROGDIQ9GZN7 287 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 NSUN3Q9H649 340 aaKnown RBP6.19□□□□□ -1.42
PRKDC-202ENST00000338368 COQ10BQ9H8M1 238 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 HPS4Q9NQG7 708 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 LRRC14BA6NHZ5 514 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 PI15O43692 258 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 SLC6A4P31645 630 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 VIPR1P32241 457 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 LMAN2Q12907 356 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 SIM2Q14190 667 aaPredicted RBP6.19□□□□□ -1.42
PRKDC-202ENST00000338368 TEAD2Q15562 447 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 PLA2G4EQ3MJ16 856 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 RNF220Q5VTB9 566 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 ASRGL1Q7L266 308 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 GRASPQ7Z6J2 395 aaPredicted RBP6.19□□□□□ -1.42
PRKDC-202ENST00000338368 ZNF514Q96K75 400 aaPredicted RBP6.19□□□□□ -1.42
PRKDC-202ENST00000338368 EMCNQ9ULC0 261 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 FAM220BPB1ANY3 271 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 GRID2O43424 1007 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 RNASEH2AO75792 299 aaKnown RBP6.19□□□□□ -1.42
PRKDC-202ENST00000338368 IL6P05231 212 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 PPIBP23284 216 aaKnown RBP6.19□□□□□ -1.42
PRKDC-202ENST00000338368 MAPK9P45984 424 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 PTPN5P54829 565 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms