RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 CHURC1-FNTBB4DL54 471 aa13.57□□□□□ -0.24
RTN4-202ENST00000337526 PPEF2O14830 753 aa13.57□□□□□ -0.24
RTN4-202ENST00000337526 EFNA1P20827 205 aaPredicted RBP13.57□□□□□ -0.24
RTN4-202ENST00000337526 ALDH4A1P30038 563 aa13.57□□□□□ -0.24
RTN4-202ENST00000337526 HCAR3P49019 387 aa13.57□□□□□ -0.24
RTN4-202ENST00000337526 CDH12P55289 794 aa13.57□□□□□ -0.24
RTN4-202ENST00000337526 FAM220AQ7Z4H9 259 aa13.57□□□□□ -0.24
RTN4-202ENST00000337526 IGDCC3Q8IVU1 814 aa13.57□□□□□ -0.24
RTN4-202ENST00000337526 FIBCD1Q8N539 461 aa13.57□□□□□ -0.24
RTN4-202ENST00000337526 ADAMTS15Q8TE58 950 aa13.57□□□□□ -0.24
RTN4-202ENST00000337526 OR8D1Q8WZ84 308 aa13.57□□□□□ -0.24
RTN4-202ENST00000337526 SEMA3GQ9NS98 782 aa13.57□□□□□ -0.24
RTN4-202ENST00000337526 RBPJLQ9UBG7 517 aa13.57□□□□□ -0.24
RTN4-202ENST00000337526 SPEF2Q9C093 1822 aa13.57□□□□□ -0.24
RTN4-202ENST00000337526 A0A1W2PQ67 120 aa13.57□□□□□ -0.24
RTN4-202ENST00000337526 H7C0S8 307 aa13.57□□□□□ -0.24
RTN4-202ENST00000337526 TOR1BO14657 336 aa13.57□□□□□ -0.24
RTN4-202ENST00000337526 SYN3O14994 580 aa13.57□□□□□ -0.24
RTN4-202ENST00000337526 AMD1P17707 334 aa13.57□□□□□ -0.24
RTN4-202ENST00000337526 RHAGQ02094 409 aa13.57□□□□□ -0.24
RTN4-202ENST00000337526 RGS1Q08116 209 aa13.57□□□□□ -0.24
RTN4-202ENST00000337526 CBX2Q14781 532 aaPredicted RBP13.57□□□□□ -0.24
RTN4-202ENST00000337526 FAM92BQ6ZTR7 304 aa13.57□□□□□ -0.24
RTN4-202ENST00000337526 DIRAS2Q96HU8 199 aa13.57□□□□□ -0.24
RTN4-202ENST00000337526 MYOCQ99972 504 aa13.57□□□□□ -0.24
RTN4-202ENST00000337526 EBPLQ9BY08 206 aa13.57□□□□□ -0.24
RTN4-202ENST00000337526 KAT8Q9H7Z6 458 aaKnown RBP13.57□□□□□ -0.24
RTN4-202ENST00000337526 SLC27A6Q9Y2P4 619 aa13.57□□□□□ -0.24
RTN4-202ENST00000337526 PEAK1Q9H792 1746 aa13.56□□□□□ -0.24
RTN4-202ENST00000337526 C9IYK1 514 aa13.56□□□□□ -0.24
RTN4-202ENST00000337526 AP2A2O94973 939 aa13.56□□□□□ -0.24
RTN4-202ENST00000337526 OR5F1O95221 314 aa13.56□□□□□ -0.24
RTN4-202ENST00000337526 CXCL14O95715 111 aa13.56□□□□□ -0.24
RTN4-202ENST00000337526 POU2F1P14859 743 aa13.56□□□□□ -0.24
RTN4-202ENST00000337526 ZNF12P17014 697 aa13.56□□□□□ -0.24
RTN4-202ENST00000337526 GJA9P57773 515 aa13.56□□□□□ -0.24
RTN4-202ENST00000337526 RNF19BQ6ZMZ0 732 aa13.56□□□□□ -0.24
RTN4-202ENST00000337526 ANKRD23Q86SG2 305 aa13.56□□□□□ -0.24
RTN4-202ENST00000337526 HID1Q8IV36 788 aa13.56□□□□□ -0.24
RTN4-202ENST00000337526 BEND7Q8N7W2 519 aaPredicted RBP13.56□□□□□ -0.24
RTN4-202ENST00000337526 CDKN2AIPNLQ96HQ2 116 aa13.56□□□□□ -0.24
RTN4-202ENST00000337526 GPR22Q99680 433 aa13.56□□□□□ -0.24
RTN4-202ENST00000337526 OSBPL2Q9H1P3 480 aa13.56□□□□□ -0.24
RTN4-202ENST00000337526 PER2O15055 1255 aa13.56□□□□□ -0.24
RTN4-202ENST00000337526 KERAO60938 352 aa13.56□□□□□ -0.24
RTN4-202ENST00000337526 KLHL18O94889 574 aa13.56□□□□□ -0.24
RTN4-202ENST00000337526 NSG1P42857 185 aa13.56□□□□□ -0.24
RTN4-202ENST00000337526 ACLYP53396 1101 aa13.56□□□□□ -0.24
RTN4-202ENST00000337526 DCST1Q5T197 706 aa13.56□□□□□ -0.24
RTN4-202ENST00000337526 HFE2Q6ZVN8 426 aa13.56□□□□□ -0.24
RTN4-202ENST00000337526 SPACA7Q96KW9 195 aa13.56□□□□□ -0.24
RTN4-202ENST00000337526 RNF39Q9H2S5 420 aa13.56□□□□□ -0.24
RTN4-202ENST00000337526 IGFLR1Q9H665 355 aa13.56□□□□□ -0.24
RTN4-202ENST00000337526 EQTNQ9NQ60 294 aa13.56□□□□□ -0.24
RTN4-202ENST00000337526 MYH2Q9UKX2 1941 aa13.56□□□□□ -0.24
RTN4-202ENST00000337526 ZW10O43264 779 aa13.56□□□□□ -0.24
RTN4-202ENST00000337526 TBX18O95935 607 aa13.56□□□□□ -0.24
RTN4-202ENST00000337526 RPS6KA3P51812 740 aa13.56□□□□□ -0.24
RTN4-202ENST00000337526 EEFSECP57772 596 aaKnown RBP13.56□□□□□ -0.24
RTN4-202ENST00000337526 SRSF11Q05519 484 aaKnown RBP13.56□□□□□ -0.24
RTN4-202ENST00000337526 TRIM32Q13049 653 aa13.56□□□□□ -0.24
RTN4-202ENST00000337526 DAG1Q14118 895 aa13.56□□□□□ -0.24
RTN4-202ENST00000337526 MED27Q6P2C8 311 aa13.56□□□□□ -0.24
RTN4-202ENST00000337526 EPGNQ6UW88 154 aa13.56□□□□□ -0.24
RTN4-202ENST00000337526 TIFABQ6ZNK6 161 aa13.56□□□□□ -0.24
RTN4-202ENST00000337526 FUBP3Q96I24 572 aaKnown RBP eCLIP13.56□□□□□ -0.242e-9■■■□□ 14.6
RTN4-202ENST00000337526 KLHL32Q96NJ5 620 aa13.56□□□□□ -0.24
RTN4-202ENST00000337526 TMEM209Q96SK2 561 aa13.56□□□□□ -0.24
RTN4-202ENST00000337526 GALPQ9UBC7 116 aa13.56□□□□□ -0.24
RTN4-202ENST00000337526 IRGMA1A4Y4 181 aa13.56□□□□□ -0.24
RTN4-202ENST00000337526 NIPSNAP2O75323 286 aa13.56□□□□□ -0.24
RTN4-202ENST00000337526 DHFRP00374 187 aa13.56□□□□□ -0.24
RTN4-202ENST00000337526 CDH15P55291 814 aa13.56□□□□□ -0.24
RTN4-202ENST00000337526 RHDQ02161 417 aa13.56□□□□□ -0.24
RTN4-202ENST00000337526 OLIG2Q13516 323 aa13.56□□□□□ -0.24
RTN4-202ENST00000337526 CCDC80Q76M96 950 aa13.56□□□□□ -0.24
RTN4-202ENST00000337526 PQLC3Q8N755 202 aa13.56□□□□□ -0.24
RTN4-202ENST00000337526 RERGQ96A58 199 aaPredicted RBP13.56□□□□□ -0.24
RTN4-202ENST00000337526 PKP2Q99959 881 aa13.56□□□□□ -0.24
RTN4-202ENST00000337526 MAT2BQ9NZL9 334 aa13.56□□□□□ -0.24
RTN4-202ENST00000337526 PCDHGA11Q9Y5H2 935 aa13.56□□□□□ -0.24
RTN4-202ENST00000337526 ZNF142P52746 1687 aaPredicted RBP13.55□□□□□ -0.24
RTN4-202ENST00000337526 ENPP3O14638 875 aa13.55□□□□□ -0.24
RTN4-202ENST00000337526 AZGP1P25311 298 aaKnown RBP13.55□□□□□ -0.24
RTN4-202ENST00000337526 HTR1BP28222 390 aa13.55□□□□□ -0.24
RTN4-202ENST00000337526 KCNA10Q16322 511 aa13.55□□□□□ -0.24
RTN4-202ENST00000337526 MBLAC2Q68D91 279 aa13.55□□□□□ -0.24
RTN4-202ENST00000337526 ZNF730Q6ZMV8 503 aa13.55□□□□□ -0.24
RTN4-202ENST00000337526 CFAP206Q8IYR0 622 aa13.55□□□□□ -0.24
RTN4-202ENST00000337526 COPS4Q9BT78 406 aa13.55□□□□□ -0.24
RTN4-202ENST00000337526 MFSD1Q9H3U5 465 aa13.55□□□□□ -0.24
RTN4-202ENST00000337526 AMBNQ9NP70 447 aa13.55□□□□□ -0.24
RTN4-202ENST00000337526 SIRPGQ9P1W8 387 aa13.55□□□□□ -0.24
RTN4-202ENST00000337526 TRPS1Q9UHF7 1281 aa13.55□□□□□ -0.24
RTN4-202ENST00000337526 CD84Q9UIB8 345 aa13.55□□□□□ -0.24
RTN4-202ENST00000337526 PSAT1Q9Y617 370 aa13.55□□□□□ -0.24
RTN4-202ENST00000337526 K7EPI3 171 aa13.55□□□□□ -0.24
RTN4-202ENST00000337526 FFAR2O15552 330 aa13.55□□□□□ -0.24
RTN4-202ENST00000337526 PSIP1O75475 530 aaKnown RBP13.55□□□□□ -0.24
RTN4-202ENST00000337526 PGLSO95336 258 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms