RNA–Protein interactions for RNA: ENST00000337339.6

MSL3-202, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-202ENST00000337339 STK40Q8N2I9 435 aa9.56□□□□□ -0.88
MSL3-202ENST00000337339 ZNF366Q8N895 744 aa9.56□□□□□ -0.88
MSL3-202ENST00000337339 C2orf15Q8WU43 125 aaKnown RBP9.56□□□□□ -0.88
MSL3-202ENST00000337339 FAM162AQ96A26 154 aa9.56□□□□□ -0.88
MSL3-202ENST00000337339 ZNF558Q96NG5 402 aa9.56□□□□□ -0.88
MSL3-202ENST00000337339 YME1L1Q96TA2 773 aa9.56□□□□□ -0.88
MSL3-202ENST00000337339 ELAC1Q9H777 363 aaKnown RBP9.56□□□□□ -0.88
MSL3-202ENST00000337339 POPDC3Q9HBV1 291 aa9.56□□□□□ -0.88
MSL3-202ENST00000337339 ZNF334Q9HCZ1 680 aaPredicted RBP9.56□□□□□ -0.88
MSL3-202ENST00000337339 CCM2LQ9NUG4 571 aaPredicted RBP9.56□□□□□ -0.88
MSL3-202ENST00000337339 EIF3LQ9Y262 564 aaKnown RBP9.56□□□□□ -0.88
MSL3-202ENST00000337339 TBC1D30Q9Y2I9 924 aa9.56□□□□□ -0.88
MSL3-202ENST00000337339 CDH23Q9H251 3354 aa9.56□□□□□ -0.88
MSL3-202ENST00000337339 DFNA5O60443 496 aa9.56□□□□□ -0.88
MSL3-202ENST00000337339 WISP3O95389 354 aaPredicted RBP9.56□□□□□ -0.88
MSL3-202ENST00000337339 HIST1H2AGP0C0S8 130 aaPredicted RBP9.56□□□□□ -0.88
MSL3-202ENST00000337339 HIST1H2ADP20671 130 aa9.56□□□□□ -0.88
MSL3-202ENST00000337339 SUOXP51687 545 aa9.56□□□□□ -0.88
MSL3-202ENST00000337339 NR1H2P55055 460 aa9.56□□□□□ -0.88
MSL3-202ENST00000337339 B3GNT6Q6ZMB0 384 aa9.56□□□□□ -0.88
MSL3-202ENST00000337339 TTC30BQ8N4P2 665 aa9.56□□□□□ -0.88
MSL3-202ENST00000337339 MINDY1Q8N5J2 469 aa9.56□□□□□ -0.88
MSL3-202ENST00000337339 SDCCAG3Q96C92 435 aa9.56□□□□□ -0.88
MSL3-202ENST00000337339 BIRC7Q96CA5 298 aa9.56□□□□□ -0.88
MSL3-202ENST00000337339 HIST1H2AHQ96KK5 128 aa9.56□□□□□ -0.88
MSL3-202ENST00000337339 ZFRQ96KR1 1074 aaKnown RBP9.56□□□□□ -0.88
MSL3-202ENST00000337339 HIST1H2AJQ99878 128 aa9.56□□□□□ -0.88
MSL3-202ENST00000337339 H2AFJQ9BTM1 129 aa9.56□□□□□ -0.88
MSL3-202ENST00000337339 BBS2Q9BXC9 721 aa9.56□□□□□ -0.88
MSL3-202ENST00000337339 KLF16Q9BXK1 252 aaPredicted RBP9.56□□□□□ -0.88
MSL3-202ENST00000337339 RPF2Q9H7B2 306 aaKnown RBP9.56□□□□□ -0.88
MSL3-202ENST00000337339 ATP13A3Q9H7F0 1226 aa9.56□□□□□ -0.88
MSL3-202ENST00000337339 PARVBQ9HBI1 364 aa9.56□□□□□ -0.88
MSL3-202ENST00000337339 ACTR3BQ9P1U1 418 aa9.56□□□□□ -0.88
MSL3-202ENST00000337339 LHX3Q9UBR4 397 aa9.56□□□□□ -0.88
MSL3-202ENST00000337339 SLCO3A1Q9UIG8 710 aa9.56□□□□□ -0.88
MSL3-202ENST00000337339 GNPTGQ9UJJ9 305 aa9.56□□□□□ -0.88
MSL3-202ENST00000337339 DHRS7Q9Y394 339 aa9.56□□□□□ -0.88
MSL3-202ENST00000337339 FADS3Q9Y5Q0 445 aa9.56□□□□□ -0.88
MSL3-202ENST00000337339 MYO9BQ13459 2157 aa9.56□□□□□ -0.88
MSL3-202ENST00000337339 FOXD2O60548 495 aaPredicted RBP9.55□□□□□ -0.88
MSL3-202ENST00000337339 PGLSO95336 258 aa9.55□□□□□ -0.88
MSL3-202ENST00000337339 SNAP29O95721 258 aa9.55□□□□□ -0.88
MSL3-202ENST00000337339 COL6A1P12109 1028 aa9.55□□□□□ -0.88
MSL3-202ENST00000337339 EPB42P16452 691 aa9.55□□□□□ -0.88
MSL3-202ENST00000337339 BPIP17213 487 aa9.55□□□□□ -0.88
MSL3-202ENST00000337339 SERPINA4P29622 427 aa9.55□□□□□ -0.88
MSL3-202ENST00000337339 CLCN7P51798 805 aa9.55□□□□□ -0.88
MSL3-202ENST00000337339 BNIP2Q12982 314 aa9.55□□□□□ -0.88
MSL3-202ENST00000337339 GRM2Q14416 872 aa9.55□□□□□ -0.88
MSL3-202ENST00000337339 SPANXN4Q5MJ08 99 aa9.55□□□□□ -0.88
MSL3-202ENST00000337339 ACBD5Q5T8D3 534 aaPredicted RBP9.55□□□□□ -0.88
MSL3-202ENST00000337339 LIX1Q8N485 282 aa9.55□□□□□ -0.88
MSL3-202ENST00000337339 TMEM199Q8N511 208 aa9.55□□□□□ -0.88
MSL3-202ENST00000337339 DHRSXQ8N5I4 330 aa9.55□□□□□ -0.88
MSL3-202ENST00000337339 ZBTB2Q8N680 514 aa9.55□□□□□ -0.88
MSL3-202ENST00000337339 SELENOMQ8WWX9 145 aa9.55□□□□□ -0.88
MSL3-202ENST00000337339 TMEM125Q96AQ2 219 aa9.55□□□□□ -0.88
MSL3-202ENST00000337339 CENPNQ96H22 339 aaPredicted RBP9.55□□□□□ -0.88
MSL3-202ENST00000337339 TTLL2Q9BWV7 592 aa9.55□□□□□ -0.88
MSL3-202ENST00000337339 ELOVL6Q9H5J4 265 aa9.55□□□□□ -0.88
MSL3-202ENST00000337339 TMEM39AQ9NV64 488 aa9.55□□□□□ -0.88
MSL3-202ENST00000337339 TNPO3Q9Y5L0 923 aaKnown RBP9.55□□□□□ -0.88
MSL3-202ENST00000337339 MIA3Q5JRA6 1907 aa9.55□□□□□ -0.88
MSL3-202ENST00000337339 C5orf42Q9H799 3197 aa9.55□□□□□ -0.88
MSL3-202ENST00000337339 OR2AG2A6NM03 316 aa9.55□□□□□ -0.88
MSL3-202ENST00000337339 NEDD8-MDP1E9PL57 170 aa9.55□□□□□ -0.88
MSL3-202ENST00000337339 STX16O14662 325 aa9.55□□□□□ -0.88
MSL3-202ENST00000337339 TBC1D4O60343 1298 aa9.55□□□□□ -0.88
MSL3-202ENST00000337339 IGSF6O95976 241 aa9.55□□□□□ -0.88
MSL3-202ENST00000337339 PENKP01210 267 aaPredicted RBP9.55□□□□□ -0.88
MSL3-202ENST00000337339 ALBP02768 609 aa9.55□□□□□ -0.88
MSL3-202ENST00000337339 F11P03951 625 aa9.55□□□□□ -0.88
MSL3-202ENST00000337339 CHRM1P11229 460 aaPredicted RBP9.55□□□□□ -0.88
MSL3-202ENST00000337339 HALP42357 657 aa9.55□□□□□ -0.88
MSL3-202ENST00000337339 RPIAP49247 311 aa9.55□□□□□ -0.88
MSL3-202ENST00000337339 CHRNB3Q05901 458 aa9.55□□□□□ -0.88
MSL3-202ENST00000337339 MTA1Q13330 715 aa9.55□□□□□ -0.88
MSL3-202ENST00000337339 BIRC2Q13490 618 aa9.55□□□□□ -0.88
MSL3-202ENST00000337339 GTDC1Q4AE62 458 aa9.55□□□□□ -0.88
MSL3-202ENST00000337339 ZNF648Q5T619 568 aaPredicted RBP9.55□□□□□ -0.88
MSL3-202ENST00000337339 ANGPTL8Q6UXH0 198 aa9.55□□□□□ -0.88
MSL3-202ENST00000337339 BEND7Q8N7W2 519 aaPredicted RBP9.55□□□□□ -0.88
MSL3-202ENST00000337339 TRPV3Q8NET8 790 aa9.55□□□□□ -0.88
MSL3-202ENST00000337339 ZNF296Q8WUU4 475 aaPredicted RBP9.55□□□□□ -0.88
MSL3-202ENST00000337339 FATE1Q969F0 183 aa9.55□□□□□ -0.88
MSL3-202ENST00000337339 OR52E6Q96RD3 313 aa9.55□□□□□ -0.88
MSL3-202ENST00000337339 C9orf16Q9BUW7 83 aa9.55□□□□□ -0.88
MSL3-202ENST00000337339 CCDC90BQ9GZT6 254 aa9.55□□□□□ -0.88
MSL3-202ENST00000337339 CLK4Q9HAZ1 481 aaKnown RBP9.55□□□□□ -0.88
MSL3-202ENST00000337339 PNPLA3Q9NST1 481 aa9.55□□□□□ -0.88
MSL3-202ENST00000337339 CCL16O15467 120 aa9.54□□□□□ -0.88
MSL3-202ENST00000337339 TEX28O15482 410 aa9.54□□□□□ -0.88
MSL3-202ENST00000337339 NOBOXO60393 691 aa9.54□□□□□ -0.88
MSL3-202ENST00000337339 RSL1D1O76021 490 aaKnown RBP9.54□□□□□ -0.88
MSL3-202ENST00000337339 XPAP23025 273 aaPredicted RBP9.54□□□□□ -0.88
MSL3-202ENST00000337339 PBLDP30039 288 aaPredicted RBP9.54□□□□□ -0.88
MSL3-202ENST00000337339 RECQLP46063 649 aaPredicted RBP9.54□□□□□ -0.88
MSL3-202ENST00000337339 ATP4BP51164 291 aa9.54□□□□□ -0.88
MSL3-202ENST00000337339 MERTKQ12866 999 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms