RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 INTS7Q9NVH2 962 aaKnown RBP13.08□□□□□ -0.32
COL2A1-201ENST00000337299 VPS9D1Q9Y2B5 631 aa13.08□□□□□ -0.32
COL2A1-201ENST00000337299 G3V2L1 256 aa13.08□□□□□ -0.32
COL2A1-201ENST00000337299 OR4D2P58180 307 aa13.08□□□□□ -0.32
COL2A1-201ENST00000337299 CATSPERGQ6ZRH7 1159 aa13.08□□□□□ -0.32
COL2A1-201ENST00000337299 SVOPLQ8N434 492 aa13.08□□□□□ -0.32
COL2A1-201ENST00000337299 JPH3Q8WXH2 748 aaPredicted RBP13.08□□□□□ -0.32
COL2A1-201ENST00000337299 ZUFSPQ96AP4 578 aa13.08□□□□□ -0.32
COL2A1-201ENST00000337299 SEMA3CQ99985 751 aa13.08□□□□□ -0.32
COL2A1-201ENST00000337299 RRAGCQ9HB90 399 aa13.08□□□□□ -0.32
COL2A1-201ENST00000337299 ZNF701M0R085 212 aaPredicted RBP13.08□□□□□ -0.32
COL2A1-201ENST00000337299 DNTTP04053 509 aa13.08□□□□□ -0.32
COL2A1-201ENST00000337299 ITGB1P05556 798 aa13.08□□□□□ -0.32
COL2A1-201ENST00000337299 UQCRC1P31930 480 aa13.08□□□□□ -0.32
COL2A1-201ENST00000337299 CASP9P55211 416 aa13.08□□□□□ -0.32
COL2A1-201ENST00000337299 C1QTNF8P60827 252 aa13.08□□□□□ -0.32
COL2A1-201ENST00000337299 ASB12Q8WXK4 309 aa13.08□□□□□ -0.32
COL2A1-201ENST00000337299 Q96MT0 163 aa13.08□□□□□ -0.32
COL2A1-201ENST00000337299 NEURL2Q9BR09 285 aa13.08□□□□□ -0.32
COL2A1-201ENST00000337299 WDR83Q9BRX9 315 aaKnown RBP13.08□□□□□ -0.32
COL2A1-201ENST00000337299 SLC22A4Q9H015 551 aa13.08□□□□□ -0.32
COL2A1-201ENST00000337299 C10orf71Q711Q0 1435 aa13.07□□□□□ -0.32
COL2A1-201ENST00000337299 LRRC14BA6NHZ5 514 aa13.07□□□□□ -0.32
COL2A1-201ENST00000337299 RRN3P2A6NIE6 340 aa13.07□□□□□ -0.32
COL2A1-201ENST00000337299 ARVCFO00192 962 aa13.07□□□□□ -0.32
COL2A1-201ENST00000337299 HNRNPFP52597 415 aaKnown RBP13.07□□□□□ -0.32
COL2A1-201ENST00000337299 EEFSECP57772 596 aaKnown RBP13.07□□□□□ -0.32
COL2A1-201ENST00000337299 WSCD2Q2TBF2 565 aa13.07□□□□□ -0.32
COL2A1-201ENST00000337299 PRAMEF19Q5SWL8 479 aa13.07□□□□□ -0.32
COL2A1-201ENST00000337299 TREML2Q5T2D2 321 aa13.07□□□□□ -0.32
COL2A1-201ENST00000337299 LCN1P1Q5VSP4 162 aa13.07□□□□□ -0.32
COL2A1-201ENST00000337299 WSCD1Q658N2 575 aa13.07□□□□□ -0.32
COL2A1-201ENST00000337299 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.07□□□□□ -0.32
COL2A1-201ENST00000337299 DPY19L3Q6ZPD9 716 aa13.07□□□□□ -0.32
COL2A1-201ENST00000337299 STRADAQ7RTN6 431 aa13.07□□□□□ -0.32
COL2A1-201ENST00000337299 SPARTQ8N0X7 666 aa13.07□□□□□ -0.32
COL2A1-201ENST00000337299 TMEM130Q8N3G9 435 aa13.07□□□□□ -0.32
COL2A1-201ENST00000337299 RPL3LQ92901 407 aaKnown RBP13.07□□□□□ -0.32
COL2A1-201ENST00000337299 CGREF1Q99674 301 aa13.07□□□□□ -0.32
COL2A1-201ENST00000337299 SLC30A2Q9BRI3 323 aa13.07□□□□□ -0.32
COL2A1-201ENST00000337299 NANOGQ9H9S0 305 aa13.07□□□□□ -0.32
COL2A1-201ENST00000337299 IL37Q9NZH6 218 aa13.07□□□□□ -0.32
COL2A1-201ENST00000337299 UBA2Q9UBT2 640 aaPredicted RBP13.07□□□□□ -0.32
COL2A1-201ENST00000337299 NUFIP1Q9UHK0 495 aaKnown RBP13.07□□□□□ -0.32
COL2A1-201ENST00000337299 STOML2Q9UJZ1 356 aa13.07□□□□□ -0.32
COL2A1-201ENST00000337299 NOX1Q9Y5S8 564 aa13.07□□□□□ -0.32
COL2A1-201ENST00000337299 GPR25O00155 361 aa13.07□□□□□ -0.32
COL2A1-201ENST00000337299 SLC1A7O00341 560 aa13.07□□□□□ -0.32
COL2A1-201ENST00000337299 KPNA5O15131 536 aa13.07□□□□□ -0.32
COL2A1-201ENST00000337299 ONECUT3O60422 494 aaPredicted RBP13.07□□□□□ -0.32
COL2A1-201ENST00000337299 TLR5O60602 858 aa13.07□□□□□ -0.32
COL2A1-201ENST00000337299 KLHL18O94889 574 aa13.07□□□□□ -0.32
COL2A1-201ENST00000337299 STAU1O95793 577 aaKnown RBP13.07□□□□□ -0.32
COL2A1-201ENST00000337299 DHFRP00374 187 aa13.07□□□□□ -0.32
COL2A1-201ENST00000337299 PRKACAP17612 351 aa13.07□□□□□ -0.32
COL2A1-201ENST00000337299 CD40LGP29965 261 aa13.07□□□□□ -0.32
COL2A1-201ENST00000337299 CYP2C18P33260 490 aa13.07□□□□□ -0.32
COL2A1-201ENST00000337299 ADCYAP1R1P41586 468 aa13.07□□□□□ -0.32
COL2A1-201ENST00000337299 DPYSL2Q16555 572 aa13.07□□□□□ -0.32
COL2A1-201ENST00000337299 MFSD14CQ5VZR4 134 aa13.07□□□□□ -0.32
COL2A1-201ENST00000337299 C18orf25Q96B23 403 aaPredicted RBP13.07□□□□□ -0.32
COL2A1-201ENST00000337299 KLRG1Q96E93 195 aa13.07□□□□□ -0.32
COL2A1-201ENST00000337299 CCDC120Q96HB5 630 aa13.07□□□□□ -0.32
COL2A1-201ENST00000337299 TRIM62Q9BVG3 475 aa13.07□□□□□ -0.32
COL2A1-201ENST00000337299 MMP27Q9H306 513 aa13.07□□□□□ -0.32
COL2A1-201ENST00000337299 MAP3K20Q9NYL2 800 aaKnown RBP13.07□□□□□ -0.32
COL2A1-201ENST00000337299 SETD1AO15047 1707 aaKnown RBP13.07□□□□□ -0.32
COL2A1-201ENST00000337299 A0A1W2PP18 115 aa13.07□□□□□ -0.32
COL2A1-201ENST00000337299 CENPBD1B2RD01 187 aa13.07□□□□□ -0.32
COL2A1-201ENST00000337299 OR2B3O76000 313 aa13.07□□□□□ -0.32
COL2A1-201ENST00000337299 LCKP06239 509 aa13.07□□□□□ -0.32
COL2A1-201ENST00000337299 PGRP06401 933 aa13.07□□□□□ -0.32
COL2A1-201ENST00000337299 NPR3P17342 541 aa13.07□□□□□ -0.32
COL2A1-201ENST00000337299 MAPK1P28482 360 aa13.07□□□□□ -0.32
COL2A1-201ENST00000337299 IDUAP35475 653 aa13.07□□□□□ -0.32
COL2A1-201ENST00000337299 PNPLA4P41247 253 aa13.07□□□□□ -0.32
COL2A1-201ENST00000337299 KDM1BQ8NB78 822 aa13.07□□□□□ -0.32
COL2A1-201ENST00000337299 BTN2A2Q8WVV5 523 aa13.07□□□□□ -0.32
COL2A1-201ENST00000337299 OTUB1Q96FW1 271 aaPredicted RBP13.07□□□□□ -0.32
COL2A1-201ENST00000337299 GPR21Q99679 349 aa13.07□□□□□ -0.32
COL2A1-201ENST00000337299 GOLGA2P5Q9HBQ8 144 aa13.07□□□□□ -0.32
COL2A1-201ENST00000337299 RDH8Q9NYR8 311 aa13.07□□□□□ -0.32
COL2A1-201ENST00000337299 GALPQ9UBC7 116 aa13.07□□□□□ -0.32
COL2A1-201ENST00000337299 SAMD4AQ9UPU9 718 aaKnown RBP13.07□□□□□ -0.32
COL2A1-201ENST00000337299 KPNA6O60684 536 aa13.06□□□□□ -0.32
COL2A1-201ENST00000337299 IMPDH1P20839 514 aa13.06□□□□□ -0.32
COL2A1-201ENST00000337299 GSTM5P46439 218 aa13.06□□□□□ -0.32
COL2A1-201ENST00000337299 ATP6AP1Q15904 470 aa13.06□□□□□ -0.32
COL2A1-201ENST00000337299 TSTQ16762 297 aaKnown RBP13.06□□□□□ -0.32
COL2A1-201ENST00000337299 ASB18Q6ZVZ8 466 aa13.06□□□□□ -0.32
COL2A1-201ENST00000337299 TP53INP2Q8IXH6 220 aa13.06□□□□□ -0.32
COL2A1-201ENST00000337299 PHACTR4Q8IZ21 702 aa13.06□□□□□ -0.32
COL2A1-201ENST00000337299 CPNE5Q9HCH3 593 aa13.06□□□□□ -0.32
COL2A1-201ENST00000337299 SLIT2O94813 1529 aa13.06□□□□□ -0.32
COL2A1-201ENST00000337299 CASTOR2A6NHX0 329 aa13.06□□□□□ -0.32
COL2A1-201ENST00000337299 MEN1O00255 615 aa13.06□□□□□ -0.32
COL2A1-201ENST00000337299 CBX4O00257 560 aa13.06□□□□□ -0.32
COL2A1-201ENST00000337299 ENPP3O14638 875 aa13.06□□□□□ -0.32
COL2A1-201ENST00000337299 SUV39H1O43463 412 aa13.06□□□□□ -0.32
COL2A1-201ENST00000337299 B4GALT4O60513 344 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms