RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 TMEM169Q96HH4 297 aa17.43■□□□□ 0.38
LRCH3-201ENST00000334859 RPF2Q9H7B2 306 aaKnown RBP17.43■□□□□ 0.38
LRCH3-201ENST00000334859 CLK4Q9HAZ1 481 aaKnown RBP17.43■□□□□ 0.38
LRCH3-201ENST00000334859 IL26Q9NPH9 171 aa17.43■□□□□ 0.38
LRCH3-201ENST00000334859 CREBZFQ9NS37 354 aa17.43■□□□□ 0.38
LRCH3-201ENST00000334859 ELOVL2Q9NXB9 296 aa17.43■□□□□ 0.38
LRCH3-201ENST00000334859 WWOXQ9NZC7 414 aa17.43■□□□□ 0.38
LRCH3-201ENST00000334859 LAMA2P24043 3122 aaKnown RBP17.43■□□□□ 0.38
LRCH3-201ENST00000334859 DLGAP1O14490 977 aa17.42■□□□□ 0.38
LRCH3-201ENST00000334859 CLDN7O95471 211 aa17.42■□□□□ 0.38
LRCH3-201ENST00000334859 LATS1O95835 1130 aa17.42■□□□□ 0.38
LRCH3-201ENST00000334859 TRBC1P01850 177 aa17.42■□□□□ 0.38
LRCH3-201ENST00000334859 RPL10P27635 214 aaKnown RBP17.42■□□□□ 0.38
LRCH3-201ENST00000334859 GDF5P43026 501 aa17.42■□□□□ 0.38
LRCH3-201ENST00000334859 PIK3CGP48736 1102 aa17.42■□□□□ 0.38
LRCH3-201ENST00000334859 ATN1P54259 1190 aaPredicted RBP17.42■□□□□ 0.38
LRCH3-201ENST00000334859 EPHB3P54753 998 aa17.42■□□□□ 0.38
LRCH3-201ENST00000334859 CDH15P55291 814 aa17.42■□□□□ 0.38
LRCH3-201ENST00000334859 RPL38P63173 70 aaKnown RBP17.42■□□□□ 0.38
LRCH3-201ENST00000334859 PHKG1Q16816 387 aa17.42■□□□□ 0.38
LRCH3-201ENST00000334859 ADAMTS19Q8TE59 1207 aa17.42■□□□□ 0.38
LRCH3-201ENST00000334859 TNKS2Q9H2K2 1166 aa17.42■□□□□ 0.38
LRCH3-201ENST00000334859 ACTL8Q9H568 366 aa17.42■□□□□ 0.38
LRCH3-201ENST00000334859 ZNF334Q9HCZ1 680 aaPredicted RBP17.42■□□□□ 0.38
LRCH3-201ENST00000334859 THEGQ9P2T0 379 aa17.42■□□□□ 0.38
LRCH3-201ENST00000334859 ST14Q9Y5Y6 855 aa17.42■□□□□ 0.38
LRCH3-201ENST00000334859 GLYATL1P3A0A0U1RQE8 302 aa17.42■□□□□ 0.38
LRCH3-201ENST00000334859 KANSL1LA0AUZ9 987 aa17.42■□□□□ 0.38
LRCH3-201ENST00000334859 H3BSA7 217 aa17.42■□□□□ 0.38
LRCH3-201ENST00000334859 SEC24DO94855 1032 aaPredicted RBP17.42■□□□□ 0.38
LRCH3-201ENST00000334859 RASAL1O95294 804 aa17.42■□□□□ 0.38
LRCH3-201ENST00000334859 NPPAP01160 153 aa17.42■□□□□ 0.38
LRCH3-201ENST00000334859 RPS3P23396 243 aaKnown RBP eCLIP17.42■□□□□ 0.38
LRCH3-201ENST00000334859 DGKAP23743 735 aa17.42■□□□□ 0.38
LRCH3-201ENST00000334859 HRH2P25021 359 aa17.42■□□□□ 0.38
LRCH3-201ENST00000334859 MERTKQ12866 999 aa17.42■□□□□ 0.38
LRCH3-201ENST00000334859 AAK1Q2M2I8 961 aa17.42■□□□□ 0.38
LRCH3-201ENST00000334859 PLA2G4EQ3MJ16 856 aa17.42■□□□□ 0.38
LRCH3-201ENST00000334859 RFTN2Q52LD8 501 aaPredicted RBP17.42■□□□□ 0.38
LRCH3-201ENST00000334859 TTC33Q6PID6 262 aaPredicted RBP17.42■□□□□ 0.38
LRCH3-201ENST00000334859 TBC1D21Q8IYX1 336 aa17.42■□□□□ 0.38
LRCH3-201ENST00000334859 ZBTB2Q8N680 514 aa17.42■□□□□ 0.38
LRCH3-201ENST00000334859 VPS50Q96JG6 964 aa17.42■□□□□ 0.38
LRCH3-201ENST00000334859 CAPNS2Q96L46 248 aa17.42■□□□□ 0.38
LRCH3-201ENST00000334859 LATS2Q9NRM7 1088 aa17.42■□□□□ 0.38
LRCH3-201ENST00000334859 DDX18Q9NVP1 670 aaKnown RBP17.42■□□□□ 0.38
LRCH3-201ENST00000334859 DNMT3BQ9UBC3 853 aaKnown RBP17.42■□□□□ 0.38
LRCH3-201ENST00000334859 OARD1Q9Y530 152 aa17.42■□□□□ 0.38
LRCH3-201ENST00000334859 DYTNA2CJ06 578 aa17.41■□□□□ 0.38
LRCH3-201ENST00000334859 GLUD1P00367 558 aa17.41■□□□□ 0.38
LRCH3-201ENST00000334859 LDLRP01130 860 aa17.41■□□□□ 0.38
LRCH3-201ENST00000334859 SLC2A4P14672 509 aa17.41■□□□□ 0.38
LRCH3-201ENST00000334859 ACRV1P26436 265 aa17.41■□□□□ 0.38
LRCH3-201ENST00000334859 HTR1EP28566 365 aa17.41■□□□□ 0.38
LRCH3-201ENST00000334859 HNF1BP35680 557 aa17.41■□□□□ 0.38
LRCH3-201ENST00000334859 FAM117BQ6P1L5 589 aa17.41■□□□□ 0.38
LRCH3-201ENST00000334859 BORAQ6PGQ7 559 aa17.41■□□□□ 0.38
LRCH3-201ENST00000334859 DPP10Q8N608 796 aa17.41■□□□□ 0.38
LRCH3-201ENST00000334859 HM13Q8TCT9 377 aa17.41■□□□□ 0.38
LRCH3-201ENST00000334859 NSMCE2Q96MF7 247 aa17.41■□□□□ 0.38
LRCH3-201ENST00000334859 RNF145Q96MT1 663 aa17.41■□□□□ 0.38
LRCH3-201ENST00000334859 TMEM45AQ9NWC5 275 aa17.41■□□□□ 0.38
LRCH3-201ENST00000334859 OPTCQ9UBM4 332 aa17.41■□□□□ 0.38
LRCH3-201ENST00000334859 PTBP2Q9UKA9 531 aaKnown RBP17.41■□□□□ 0.38
LRCH3-201ENST00000334859 INSL5Q9Y5Q6 135 aa17.41■□□□□ 0.38
LRCH3-201ENST00000334859 MICAL3Q7RTP6 2002 aa17.41■□□□□ 0.38
LRCH3-201ENST00000334859 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.41■□□□□ 0.38
LRCH3-201ENST00000334859 TAPBPO15533 448 aa17.41■□□□□ 0.38
LRCH3-201ENST00000334859 GREM1O60565 184 aa17.41■□□□□ 0.38
LRCH3-201ENST00000334859 UMPSP11172 480 aa17.41■□□□□ 0.38
LRCH3-201ENST00000334859 BPIP17213 487 aa17.41■□□□□ 0.38
LRCH3-201ENST00000334859 CDH2P19022 906 aaPredicted RBP17.41■□□□□ 0.38
LRCH3-201ENST00000334859 SEMG2Q02383 582 aa17.41■□□□□ 0.38
LRCH3-201ENST00000334859 SELPLGQ14242 412 aa17.41■□□□□ 0.38
LRCH3-201ENST00000334859 PTGR1Q14914 329 aa17.41■□□□□ 0.38
LRCH3-201ENST00000334859 CHRNA6Q15825 494 aa17.41■□□□□ 0.38
LRCH3-201ENST00000334859 DLEU7Q6UYE1 221 aa17.41■□□□□ 0.38
LRCH3-201ENST00000334859 PROSER1Q86XN7 944 aa17.41■□□□□ 0.38
LRCH3-201ENST00000334859 OSCP1Q8WVF1 389 aa17.41■□□□□ 0.38
LRCH3-201ENST00000334859 BIRC7Q96CA5 298 aa17.41■□□□□ 0.38
LRCH3-201ENST00000334859 HIC2Q96JB3 615 aa17.41■□□□□ 0.38
LRCH3-201ENST00000334859 MAGEL2Q9UJ55 1249 aa17.41■□□□□ 0.38
LRCH3-201ENST00000334859 SLC8A2Q9UPR5 921 aa17.41■□□□□ 0.38
LRCH3-201ENST00000334859 CEPT1Q9Y6K0 416 aa17.41■□□□□ 0.38
LRCH3-201ENST00000334859 ACOX3O15254 700 aa17.4■□□□□ 0.38
LRCH3-201ENST00000334859 RSL1D1O76021 490 aaKnown RBP17.4■□□□□ 0.38
LRCH3-201ENST00000334859 CLIC3O95833 236 aa17.4■□□□□ 0.38
LRCH3-201ENST00000334859 URODP06132 367 aa17.4■□□□□ 0.38
LRCH3-201ENST00000334859 CKMP06732 381 aa17.4■□□□□ 0.38
LRCH3-201ENST00000334859 MYF6P23409 242 aa17.4■□□□□ 0.38
LRCH3-201ENST00000334859 VARSP26640 1264 aaKnown RBP17.4■□□□□ 0.38
LRCH3-201ENST00000334859 SGO1Q5FBB7 561 aa17.4■□□□□ 0.38
LRCH3-201ENST00000334859 Q6ZNB5 142 aa17.4■□□□□ 0.38
LRCH3-201ENST00000334859 SPRED1Q7Z699 444 aa17.4■□□□□ 0.38
LRCH3-201ENST00000334859 TMCO2Q7Z6W1 182 aaPredicted RBP17.4■□□□□ 0.38
LRCH3-201ENST00000334859 TNIP2Q8NFZ5 429 aa17.4■□□□□ 0.38
LRCH3-201ENST00000334859 ISG20Q96AZ6 181 aaKnown RBP17.4■□□□□ 0.38
LRCH3-201ENST00000334859 TMIGD2Q96BF3 282 aa17.4■□□□□ 0.38
LRCH3-201ENST00000334859 FBXL20Q96IG2 436 aa17.4■□□□□ 0.38
LRCH3-201ENST00000334859 PPP3R2Q96LZ3 170 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms