RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 ASCC3Q8N3C0 2202 aaKnown RBP17.16■□□□□ 0.34
CHGA-202ENST00000334654 FAM186AA6NE01 2351 aa17.16■□□□□ 0.34
CHGA-202ENST00000334654 A6NCN8 305 aa17.16■□□□□ 0.34
CHGA-202ENST00000334654 E5RI56 91 aa17.16■□□□□ 0.34
CHGA-202ENST00000334654 F8W8V4 182 aa17.16■□□□□ 0.34
CHGA-202ENST00000334654 H3BM21 787 aa17.16■□□□□ 0.34
CHGA-202ENST00000334654 RASGRF2O14827 1237 aa17.16■□□□□ 0.34
CHGA-202ENST00000334654 AQP9O43315 295 aa17.16■□□□□ 0.34
CHGA-202ENST00000334654 VPS26AO75436 327 aa17.16■□□□□ 0.34
CHGA-202ENST00000334654 CER1O95813 267 aa17.16■□□□□ 0.34
CHGA-202ENST00000334654 IL9RQ01113 521 aa17.16■□□□□ 0.34
CHGA-202ENST00000334654 ILF3Q12906 894 aaKnown RBP eCLIP17.16■□□□□ 0.34
CHGA-202ENST00000334654 ZNF460Q14592 562 aa17.16■□□□□ 0.34
CHGA-202ENST00000334654 PAQR3Q6TCH7 311 aa17.16■□□□□ 0.34
CHGA-202ENST00000334654 MTERF4Q7Z6M4 381 aaKnown RBP17.16■□□□□ 0.34
CHGA-202ENST00000334654 FSTL5Q8N475 847 aaPredicted RBP17.16■□□□□ 0.34
CHGA-202ENST00000334654 ISL2Q96A47 359 aa17.16■□□□□ 0.34
CHGA-202ENST00000334654 GTPBP2Q9BX10 602 aaKnown RBP17.16■□□□□ 0.34
CHGA-202ENST00000334654 SARS2Q9NP81 518 aaKnown RBP17.16■□□□□ 0.34
CHGA-202ENST00000334654 FAM8A1Q9UBU6 413 aa17.16■□□□□ 0.34
CHGA-202ENST00000334654 TBC1D29Q9UFV1 150 aa17.16■□□□□ 0.34
CHGA-202ENST00000334654 CSNK1G3Q9Y6M4 447 aa17.16■□□□□ 0.34
CHGA-202ENST00000334654 TRIM49D1C9J1S8 452 aa17.15■□□□□ 0.34
CHGA-202ENST00000334654 LMO7DNF2Z398 122 aa17.15■□□□□ 0.34
CHGA-202ENST00000334654 LIN7AO14910 233 aaPredicted RBP17.15■□□□□ 0.34
CHGA-202ENST00000334654 YY2O15391 372 aa17.15■□□□□ 0.34
CHGA-202ENST00000334654 CDH16O75309 829 aa17.15■□□□□ 0.34
CHGA-202ENST00000334654 KRT38O76015 456 aa17.15■□□□□ 0.34
CHGA-202ENST00000334654 SLCO2B1O94956 709 aa17.15■□□□□ 0.34
CHGA-202ENST00000334654 SNRPAP09012 282 aaKnown RBP17.15■□□□□ 0.34
CHGA-202ENST00000334654 BRAFP15056 766 aa17.15■□□□□ 0.34
CHGA-202ENST00000334654 SAT1P21673 171 aa17.15■□□□□ 0.34
CHGA-202ENST00000334654 CNTFP26441 200 aa17.15■□□□□ 0.34
CHGA-202ENST00000334654 ACTR1BP42025 376 aa17.15■□□□□ 0.34
CHGA-202ENST00000334654 MAGEA12P43365 314 aa17.15■□□□□ 0.34
CHGA-202ENST00000334654 PREPP48147 710 aa17.15■□□□□ 0.34
CHGA-202ENST00000334654 ACTR1AP61163 376 aa17.15■□□□□ 0.34
CHGA-202ENST00000334654 IFFO1Q0D2I5 559 aa17.15■□□□□ 0.34
CHGA-202ENST00000334654 BOP1Q14137 746 aaKnown RBP17.15■□□□□ 0.34
CHGA-202ENST00000334654 USP10Q14694 798 aaKnown RBP17.15■□□□□ 0.34
CHGA-202ENST00000334654 ELOCQ15369 112 aa17.15■□□□□ 0.34
CHGA-202ENST00000334654 PLEKHS1Q5SXH7 462 aa17.15■□□□□ 0.34
CHGA-202ENST00000334654 SLC30A9Q6PML9 568 aa17.15■□□□□ 0.34
CHGA-202ENST00000334654 LRIG3Q6UXM1 1119 aa17.15■□□□□ 0.34
CHGA-202ENST00000334654 OTOAQ7RTW8 1153 aa17.15■□□□□ 0.34
CHGA-202ENST00000334654 CMC1Q7Z7K0 106 aa17.15■□□□□ 0.34
CHGA-202ENST00000334654 SFTPA2Q8IWL1 248 aa17.15■□□□□ 0.34
CHGA-202ENST00000334654 ZBTB2Q8N680 514 aa17.15■□□□□ 0.34
CHGA-202ENST00000334654 INPP5DQ92835 1189 aa17.15■□□□□ 0.34
CHGA-202ENST00000334654 TSSK1BQ9BXA7 367 aa17.15■□□□□ 0.34
CHGA-202ENST00000334654 GSDMCQ9BYG8 508 aa17.15■□□□□ 0.34
CHGA-202ENST00000334654 OR52A5Q9H2C5 316 aa17.15■□□□□ 0.34
CHGA-202ENST00000334654 DNAAF2Q9NVR5 837 aaKnown RBP17.15■□□□□ 0.34
CHGA-202ENST00000334654 TAAR2Q9P1P5 351 aa17.15■□□□□ 0.34
CHGA-202ENST00000334654 TBK1Q9UHD2 729 aa17.15■□□□□ 0.34
CHGA-202ENST00000334654 LGALS13Q9UHV8 139 aa17.15■□□□□ 0.34
CHGA-202ENST00000334654 PCOLCE2Q9UKZ9 415 aa17.15■□□□□ 0.34
CHGA-202ENST00000334654 WDR37Q9Y2I8 494 aa17.15■□□□□ 0.34
CHGA-202ENST00000334654 GVINP1Q7Z2Y8 2422 aa17.14■□□□□ 0.33
CHGA-202ENST00000334654 TLDC2A0PJX2 215 aa17.14■□□□□ 0.33
CHGA-202ENST00000334654 SMIM23A6NLE4 172 aa17.14■□□□□ 0.33
CHGA-202ENST00000334654 FOXO6A8MYZ6 492 aa17.14■□□□□ 0.33
CHGA-202ENST00000334654 KPNA5O15131 536 aa17.14■□□□□ 0.33
CHGA-202ENST00000334654 ATP8B1O43520 1251 aa17.14■□□□□ 0.33
CHGA-202ENST00000334654 RFPL1O75677 317 aa17.14■□□□□ 0.33
CHGA-202ENST00000334654 TSPAN12O95859 305 aa17.14■□□□□ 0.33
CHGA-202ENST00000334654 ZNF883P0CG24 379 aa17.14■□□□□ 0.33
CHGA-202ENST00000334654 GMPRP36959 345 aa17.14■□□□□ 0.33
CHGA-202ENST00000334654 SKIV2L2P42285 1042 aaKnown RBP17.14■□□□□ 0.33
CHGA-202ENST00000334654 HSPA14Q0VDF9 509 aa17.14■□□□□ 0.33
CHGA-202ENST00000334654 ACSBG2Q5FVE4 666 aa17.14■□□□□ 0.33
CHGA-202ENST00000334654 ABRAXAS1Q6UWZ7 409 aa17.14■□□□□ 0.33
CHGA-202ENST00000334654 WASH2PQ6VEQ5 465 aa17.14■□□□□ 0.33
CHGA-202ENST00000334654 CYHR1Q6ZMK1 362 aa17.14■□□□□ 0.33
CHGA-202ENST00000334654 DBX2Q6ZNG2 339 aa17.14■□□□□ 0.33
CHGA-202ENST00000334654 TIFABQ6ZNK6 161 aa17.14■□□□□ 0.33
CHGA-202ENST00000334654 TAF8Q7Z7C8 310 aa17.14■□□□□ 0.33
CHGA-202ENST00000334654 GATAD2AQ86YP4 633 aa17.14■□□□□ 0.33
CHGA-202ENST00000334654 SDR16C5Q8N3Y7 309 aa17.14■□□□□ 0.33
CHGA-202ENST00000334654 ASZ1Q8WWH4 475 aa17.14■□□□□ 0.33
CHGA-202ENST00000334654 POPDC3Q9HBV1 291 aa17.14■□□□□ 0.33
CHGA-202ENST00000334654 WASH6PQ9NQA3 447 aa17.14■□□□□ 0.33
CHGA-202ENST00000334654 PRDM8Q9NQV8 689 aa17.14■□□□□ 0.33
CHGA-202ENST00000334654 ZNF446Q9NWS9 450 aa17.14■□□□□ 0.33
CHGA-202ENST00000334654 SCHIP1Q9P0W5 487 aaPredicted RBP17.14■□□□□ 0.33
CHGA-202ENST00000334654 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.14■□□□□ 0.33
CHGA-202ENST00000334654 AGPSO00116 658 aa17.13■□□□□ 0.33
CHGA-202ENST00000334654 YKT6O15498 198 aa17.13■□□□□ 0.33
CHGA-202ENST00000334654 PHGDHO43175 533 aaKnown RBP17.13■□□□□ 0.33
CHGA-202ENST00000334654 PCDHGA12O60330 932 aa17.13■□□□□ 0.33
CHGA-202ENST00000334654 KRT37O76014 449 aa17.13■□□□□ 0.33
CHGA-202ENST00000334654 APOA4P06727 396 aa17.13■□□□□ 0.33
CHGA-202ENST00000334654 SLC35E2BP0CK96 405 aa17.13■□□□□ 0.33
CHGA-202ENST00000334654 STMN1P16949 149 aa17.13■□□□□ 0.33
CHGA-202ENST00000334654 VCLP18206 1134 aa17.13■□□□□ 0.33
CHGA-202ENST00000334654 IDSP22304 550 aa17.13■□□□□ 0.33
CHGA-202ENST00000334654 RPL10P27635 214 aaKnown RBP17.13■□□□□ 0.33
CHGA-202ENST00000334654 CCT8P50990 548 aa17.13■□□□□ 0.33
CHGA-202ENST00000334654 RAB10P61026 200 aa17.13■□□□□ 0.33
CHGA-202ENST00000334654 RPA4Q13156 261 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms