RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 COMMD10Q9Y6G5 202 aa13.55□□□□□ -0.24
SYNE3-201ENST00000334258 PAGE1O75459 146 aa13.54□□□□□ -0.24
SYNE3-201ENST00000334258 FADS2O95864 444 aaKnown RBP13.54□□□□□ -0.24
SYNE3-201ENST00000334258 ZNF37AP17032 561 aaPredicted RBP13.54□□□□□ -0.24
SYNE3-201ENST00000334258 CLK1P49759 484 aaKnown RBP13.54□□□□□ -0.24
SYNE3-201ENST00000334258 ZNF33AQ06730 810 aa13.54□□□□□ -0.24
SYNE3-201ENST00000334258 E2F2Q14209 437 aa13.54□□□□□ -0.24
SYNE3-201ENST00000334258 TRIP4Q15650 581 aaPredicted RBP13.54□□□□□ -0.24
SYNE3-201ENST00000334258 NPTX1Q15818 432 aa13.54□□□□□ -0.24
SYNE3-201ENST00000334258 CCDC103Q8IW40 242 aa13.54□□□□□ -0.24
SYNE3-201ENST00000334258 EID3Q8N140 333 aa13.54□□□□□ -0.24
SYNE3-201ENST00000334258 OR10A6Q8NH74 314 aa13.54□□□□□ -0.24
SYNE3-201ENST00000334258 SLC47A1Q96FL8 570 aa13.54□□□□□ -0.24
SYNE3-201ENST00000334258 ALOXE3Q9BYJ1 711 aa13.54□□□□□ -0.24
SYNE3-201ENST00000334258 UTS2RQ9UKP6 389 aa13.54□□□□□ -0.24
SYNE3-201ENST00000334258 GABRQQ9UN88 632 aa13.54□□□□□ -0.24
SYNE3-201ENST00000334258 BCKDKO14874 412 aa13.54□□□□□ -0.24
SYNE3-201ENST00000334258 AOC2O75106 756 aa13.54□□□□□ -0.24
SYNE3-201ENST00000334258 GABARAPO95166 117 aa13.54□□□□□ -0.24
SYNE3-201ENST00000334258 ELNP15502 786 aa13.54□□□□□ -0.24
SYNE3-201ENST00000334258 ERVK-8P63133 956 aa13.54□□□□□ -0.24
SYNE3-201ENST00000334258 DSC2Q02487 901 aa13.54□□□□□ -0.24
SYNE3-201ENST00000334258 NDUFA5Q16718 116 aa13.54□□□□□ -0.24
SYNE3-201ENST00000334258 MRNIPQ6NTE8 343 aa13.54□□□□□ -0.24
SYNE3-201ENST00000334258 RASAL3Q86YV0 1011 aa13.54□□□□□ -0.24
SYNE3-201ENST00000334258 TOP6BLQ8N6T0 577 aa13.54□□□□□ -0.24
SYNE3-201ENST00000334258 ZMIZ2Q8NF64 920 aa13.54□□□□□ -0.24
SYNE3-201ENST00000334258 FAR1Q8WVX9 515 aa13.54□□□□□ -0.24
SYNE3-201ENST00000334258 PGAP3Q96FM1 320 aaPredicted RBP13.54□□□□□ -0.24
SYNE3-201ENST00000334258 C6orf62Q9GZU0 229 aaPredicted RBP13.54□□□□□ -0.24
SYNE3-201ENST00000334258 FNDC3AQ9Y2H6 1198 aaKnown RBP13.54□□□□□ -0.24
SYNE3-201ENST00000334258 MEIS3P2A8K0S8 358 aa13.54□□□□□ -0.24
SYNE3-201ENST00000334258 PRKD3O94806 890 aa13.54□□□□□ -0.24
SYNE3-201ENST00000334258 HPRP00739 348 aa13.54□□□□□ -0.24
SYNE3-201ENST00000334258 VAC14Q08AM6 782 aa13.54□□□□□ -0.24
SYNE3-201ENST00000334258 GNASQ5JWF2 1037 aa13.54□□□□□ -0.24
SYNE3-201ENST00000334258 WDR45BQ5MNZ6 344 aa13.54□□□□□ -0.24
SYNE3-201ENST00000334258 CATSPEREQ5SY80 951 aa13.54□□□□□ -0.24
SYNE3-201ENST00000334258 ZNF549Q6P9A3 640 aa13.54□□□□□ -0.24
SYNE3-201ENST00000334258 PAQR3Q6TCH7 311 aa13.54□□□□□ -0.24
SYNE3-201ENST00000334258 SYVN1Q86TM6 617 aa13.54□□□□□ -0.24
SYNE3-201ENST00000334258 OR10Q1Q8NGQ4 319 aa13.54□□□□□ -0.24
SYNE3-201ENST00000334258 PROKR1Q8TCW9 393 aa13.54□□□□□ -0.24
SYNE3-201ENST00000334258 RPL3LQ92901 407 aaKnown RBP13.54□□□□□ -0.24
SYNE3-201ENST00000334258 ZHX1-C8orf76Q96EF9 292 aa13.54□□□□□ -0.24
SYNE3-201ENST00000334258 RDH12Q96NR8 316 aa13.54□□□□□ -0.24
SYNE3-201ENST00000334258 CDK15Q96Q40 435 aa13.54□□□□□ -0.24
SYNE3-201ENST00000334258 MFSD1Q9H3U5 465 aa13.54□□□□□ -0.24
SYNE3-201ENST00000334258 RIBC2Q9H4K1 309 aa13.54□□□□□ -0.24
SYNE3-201ENST00000334258 KLHL3Q9UH77 587 aa13.54□□□□□ -0.24
SYNE3-201ENST00000334258 TSR3Q9UJK0 312 aaKnown RBP13.54□□□□□ -0.24
SYNE3-201ENST00000334258 C5orf42Q9H799 3197 aa13.53□□□□□ -0.24
SYNE3-201ENST00000334258 ANKRD34BA5PLL1 514 aa13.53□□□□□ -0.24
SYNE3-201ENST00000334258 CD3EAPO15446 510 aaKnown RBP13.53□□□□□ -0.24
SYNE3-201ENST00000334258 GOT2P00505 430 aaKnown RBP13.53□□□□□ -0.24
SYNE3-201ENST00000334258 SMIM10L2AP0DMW4 78 aa13.53□□□□□ -0.24
SYNE3-201ENST00000334258 SMIM10L2BP0DMW5 78 aa13.53□□□□□ -0.24
SYNE3-201ENST00000334258 GRIK1P39086 918 aa13.53□□□□□ -0.24
SYNE3-201ENST00000334258 HNRNPFP52597 415 aaKnown RBP13.53□□□□□ -0.24
SYNE3-201ENST00000334258 ISL1P61371 349 aa13.53□□□□□ -0.24
SYNE3-201ENST00000334258 C6orf136Q5SQH8 315 aa13.53□□□□□ -0.24
SYNE3-201ENST00000334258 NEK10Q6ZWH5 1172 aa13.53□□□□□ -0.24
SYNE3-201ENST00000334258 BEND5Q7L4P6 421 aa13.53□□□□□ -0.24
SYNE3-201ENST00000334258 SENP8Q96LD8 212 aa13.53□□□□□ -0.24
SYNE3-201ENST00000334258 SLC25A51Q9H1U9 297 aa13.53□□□□□ -0.24
SYNE3-201ENST00000334258 CARS2Q9HA77 564 aaKnown RBP13.53□□□□□ -0.24
SYNE3-201ENST00000334258 SCN3BQ9NY72 215 aa13.53□□□□□ -0.24
SYNE3-201ENST00000334258 UXTQ9UBK9 157 aaPredicted RBP13.53□□□□□ -0.24
SYNE3-201ENST00000334258 IFT52Q9Y366 437 aa13.53□□□□□ -0.24
SYNE3-201ENST00000334258 BTN3A1O00481 513 aa13.53□□□□□ -0.24
SYNE3-201ENST00000334258 DDX5P17844 614 aaKnown RBP13.53□□□□□ -0.24
SYNE3-201ENST00000334258 FMO4P31512 558 aa13.53□□□□□ -0.24
SYNE3-201ENST00000334258 NRG1Q02297 640 aaPredicted RBP13.53□□□□□ -0.24
SYNE3-201ENST00000334258 CDK5R2Q13319 367 aa13.53□□□□□ -0.24
SYNE3-201ENST00000334258 LAPTM4AQ15012 233 aa13.53□□□□□ -0.24
SYNE3-201ENST00000334258 NR6A1Q15406 480 aa13.53□□□□□ -0.24
SYNE3-201ENST00000334258 COLEC12Q5KU26 742 aa13.53□□□□□ -0.24
SYNE3-201ENST00000334258 MARC1Q5VT66 337 aa13.53□□□□□ -0.24
SYNE3-201ENST00000334258 ALKAL1Q6UXT8 129 aa13.53□□□□□ -0.24
SYNE3-201ENST00000334258 LRRC8DQ7L1W4 858 aa13.53□□□□□ -0.24
SYNE3-201ENST00000334258 ADHFE1Q8IWW8 467 aa13.53□□□□□ -0.24
SYNE3-201ENST00000334258 OR2T11Q8NH01 316 aa13.53□□□□□ -0.24
SYNE3-201ENST00000334258 ZFP42Q96MM3 310 aa13.53□□□□□ -0.24
SYNE3-201ENST00000334258 ZNF599Q96NL3 588 aa13.53□□□□□ -0.24
SYNE3-201ENST00000334258 ATOH8Q96SQ7 321 aa13.53□□□□□ -0.24
SYNE3-201ENST00000334258 SMOC2Q9H3U7 446 aa13.53□□□□□ -0.24
SYNE3-201ENST00000334258 DSN1Q9H410 356 aa13.53□□□□□ -0.24
SYNE3-201ENST00000334258 SCUBE2Q9NQ36 999 aa13.53□□□□□ -0.24
SYNE3-201ENST00000334258 NECTIN3Q9NQS3 549 aa13.53□□□□□ -0.24
SYNE3-201ENST00000334258 ITM2CQ9NQX7 267 aa13.53□□□□□ -0.24
SYNE3-201ENST00000334258 INTS6Q9UL03 887 aaKnown RBP13.53□□□□□ -0.24
SYNE3-201ENST00000334258 FAM92AA1XBS5 289 aa13.52□□□□□ -0.24
SYNE3-201ENST00000334258 TNFRSF10AO00220 468 aa13.52□□□□□ -0.24
SYNE3-201ENST00000334258 CDC7O00311 574 aa13.52□□□□□ -0.24
SYNE3-201ENST00000334258 PRMT5O14744 637 aaPredicted RBP13.52□□□□□ -0.24
SYNE3-201ENST00000334258 RAD51BO15315 384 aa13.52□□□□□ -0.24
SYNE3-201ENST00000334258 DFNA5O60443 496 aa13.52□□□□□ -0.24
SYNE3-201ENST00000334258 ECI2O75521 394 aa13.52□□□□□ -0.24
SYNE3-201ENST00000334258 OR4F21O95013 312 aa13.52□□□□□ -0.24
SYNE3-201ENST00000334258 UROSP10746 265 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms