RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 M0R3G1 203 aa23.27■■□□□ 1.32
TSKU-201ENST00000333090 E2F3O00716 465 aa23.27■■□□□ 1.32
TSKU-201ENST00000333090 TNFRSF10BO14763 440 aa23.27■■□□□ 1.32
TSKU-201ENST00000333090 ZNF235Q14590 738 aa23.27■■□□□ 1.32
TSKU-201ENST00000333090 OVOS1Q6IE37 1185 aa23.27■■□□□ 1.32
TSKU-201ENST00000333090 NECAB2Q7Z6G3 386 aa23.27■■□□□ 1.32
TSKU-201ENST00000333090 TLK2Q86UE8 772 aa23.27■■□□□ 1.32
TSKU-201ENST00000333090 SIDT2Q8NBJ9 832 aaKnown RBP23.27■■□□□ 1.32
TSKU-201ENST00000333090 NDNFQ8TB73 568 aa23.27■■□□□ 1.32
TSKU-201ENST00000333090 CNIH3Q8TBE1 160 aa23.27■■□□□ 1.32
TSKU-201ENST00000333090 IGSF8Q969P0 613 aa23.27■■□□□ 1.32
TSKU-201ENST00000333090 ATP13A3Q9H7F0 1226 aa23.27■■□□□ 1.32
TSKU-201ENST00000333090 ST3GAL5Q9UNP4 418 aa23.27■■□□□ 1.32
TSKU-201ENST00000333090 U3KQV3 271 aa23.27■■□□□ 1.32
TSKU-201ENST00000333090 CAPN1P07384 714 aa23.27■■□□□ 1.32
TSKU-201ENST00000333090 FSHRP23945 695 aa23.27■■□□□ 1.32
TSKU-201ENST00000333090 CDKN1CP49918 316 aaPredicted RBP23.27■■□□□ 1.32
TSKU-201ENST00000333090 TBX4P57082 545 aa23.27■■□□□ 1.32
TSKU-201ENST00000333090 GRB14Q14449 540 aa23.27■■□□□ 1.32
TSKU-201ENST00000333090 PGS1Q32NB8 556 aa23.27■■□□□ 1.32
TSKU-201ENST00000333090 DNAJC14Q6Y2X3 702 aaPredicted RBP23.27■■□□□ 1.32
TSKU-201ENST00000333090 PRR23BQ6ZRT6 265 aa23.27■■□□□ 1.32
TSKU-201ENST00000333090 GPSM1Q86YR5 675 aa23.27■■□□□ 1.32
TSKU-201ENST00000333090 ZNF683Q8IZ20 524 aa23.27■■□□□ 1.32
TSKU-201ENST00000333090 GLMNQ92990 594 aa23.27■■□□□ 1.32
TSKU-201ENST00000333090 FATE1Q969F0 183 aa23.27■■□□□ 1.32
TSKU-201ENST00000333090 HEBP1Q9NRV9 189 aa23.27■■□□□ 1.32
TSKU-201ENST00000333090 NIPSNAP3AQ9UFN0 247 aaPredicted RBP23.27■■□□□ 1.32
TSKU-201ENST00000333090 C3orf18Q9UK00 162 aa23.27■■□□□ 1.32
TSKU-201ENST00000333090 FNDC3AQ9Y2H6 1198 aaKnown RBP23.27■■□□□ 1.32
TSKU-201ENST00000333090 GIT1Q9Y2X7 761 aa23.27■■□□□ 1.32
TSKU-201ENST00000333090 GRXCR2A6NFK2 248 aa23.26■■□□□ 1.31
TSKU-201ENST00000333090 ARNTLO00327 626 aa23.26■■□□□ 1.31
TSKU-201ENST00000333090 RAMP2O60895 175 aa23.26■■□□□ 1.31
TSKU-201ENST00000333090 RPL9P32969 192 aaKnown RBP23.26■■□□□ 1.31
TSKU-201ENST00000333090 ACVRL1P37023 503 aa23.26■■□□□ 1.31
TSKU-201ENST00000333090 EMX1Q04741 257 aaPredicted RBP23.26■■□□□ 1.31
TSKU-201ENST00000333090 TOP3AQ13472 1001 aaPredicted RBP23.26■■□□□ 1.31
TSKU-201ENST00000333090 CCDC92Q53HC0 331 aaPredicted RBP23.26■■□□□ 1.31
TSKU-201ENST00000333090 PAGE2BQ5JRK9 111 aa23.26■■□□□ 1.31
TSKU-201ENST00000333090 AGMOQ6ZNB7 445 aa23.26■■□□□ 1.31
TSKU-201ENST00000333090 NKAPQ8N5F7 415 aaKnown RBP23.26■■□□□ 1.31
TSKU-201ENST00000333090 ZNF513Q8N8E2 541 aaPredicted RBP23.26■■□□□ 1.31
TSKU-201ENST00000333090 FAM162AQ96A26 154 aa23.26■■□□□ 1.31
TSKU-201ENST00000333090 ZNF641Q96N77 438 aaPredicted RBP23.26■■□□□ 1.31
TSKU-201ENST00000333090 CORO1BQ9BR76 489 aa23.26■■□□□ 1.31
TSKU-201ENST00000333090 GORASP2Q9H8Y8 452 aa23.26■■□□□ 1.31
TSKU-201ENST00000333090 ITGB1BP2Q9UKP3 347 aa23.26■■□□□ 1.31
TSKU-201ENST00000333090 TLR6Q9Y2C9 796 aa23.26■■□□□ 1.31
TSKU-201ENST00000333090 TSC22D4Q9Y3Q8 395 aa23.26■■□□□ 1.31
TSKU-201ENST00000333090 NEUROG3Q9Y4Z2 214 aa23.26■■□□□ 1.31
TSKU-201ENST00000333090 C17orf102A2RUQ5 167 aa23.26■■□□□ 1.31
TSKU-201ENST00000333090 KLK8O60259 260 aa23.26■■□□□ 1.31
TSKU-201ENST00000333090 NIPSNAP2O75323 286 aa23.26■■□□□ 1.31
TSKU-201ENST00000333090 PRKD3O94806 890 aa23.26■■□□□ 1.31
TSKU-201ENST00000333090 NADKO95544 446 aaPredicted RBP23.26■■□□□ 1.31
TSKU-201ENST00000333090 OR4Q2P0C623 313 aa23.26■■□□□ 1.31
TSKU-201ENST00000333090 GSTT2P0CG29 244 aa23.26■■□□□ 1.31
TSKU-201ENST00000333090 GSTT2BP0CG30 244 aa23.26■■□□□ 1.31
TSKU-201ENST00000333090 TSPY1Q01534 308 aa23.26■■□□□ 1.31
TSKU-201ENST00000333090 INAQ16352 499 aa23.26■■□□□ 1.31
TSKU-201ENST00000333090 RAP1GAP2Q684P5 730 aa23.26■■□□□ 1.31
TSKU-201ENST00000333090 SVOPLQ8N434 492 aa23.26■■□□□ 1.31
TSKU-201ENST00000333090 OR4K2Q8NGD2 314 aa23.26■■□□□ 1.31
TSKU-201ENST00000333090 OR8J3Q8NGG0 315 aa23.26■■□□□ 1.31
TSKU-201ENST00000333090 EEF1AKMT1Q8WVE0 214 aa23.26■■□□□ 1.31
TSKU-201ENST00000333090 S100ZQ8WXG8 99 aa23.26■■□□□ 1.31
TSKU-201ENST00000333090 ITCHQ96J02 903 aa23.26■■□□□ 1.31
TSKU-201ENST00000333090 BTN2A3PQ96KV6 586 aa23.26■■□□□ 1.31
TSKU-201ENST00000333090 TSR3Q9UJK0 312 aaKnown RBP23.26■■□□□ 1.31
TSKU-201ENST00000333090 PBX3P40426 434 aa23.25■■□□□ 1.31
TSKU-201ENST00000333090 TMEM179BQ7Z7N9 219 aa23.25■■□□□ 1.31
TSKU-201ENST00000333090 AADATQ8N5Z0 425 aa23.25■■□□□ 1.31
TSKU-201ENST00000333090 GIPC2Q8TF65 315 aa23.25■■□□□ 1.31
TSKU-201ENST00000333090 IKZF5Q9H5V7 419 aa23.25■■□□□ 1.31
TSKU-201ENST00000333090 IL5RAQ01344 420 aa23.25■■□□□ 1.31
TSKU-201ENST00000333090 AP5B1Q2VPB7 878 aa23.25■■□□□ 1.31
TSKU-201ENST00000333090 ADPRMQ3LIE5 342 aa23.25■■□□□ 1.31
TSKU-201ENST00000333090 RFTN2Q52LD8 501 aaPredicted RBP23.25■■□□□ 1.31
TSKU-201ENST00000333090 FBXL22Q6P050 247 aa23.25■■□□□ 1.31
TSKU-201ENST00000333090 PLEKHH3Q7Z736 793 aa23.25■■□□□ 1.31
TSKU-201ENST00000333090 ZNF548Q8NEK5 533 aaPredicted RBP23.25■■□□□ 1.31
TSKU-201ENST00000333090 FAR1Q8WVX9 515 aa23.25■■□□□ 1.31
TSKU-201ENST00000333090 LINGO1Q96FE5 620 aa23.25■■□□□ 1.31
TSKU-201ENST00000333090 VMP1Q96GC9 406 aa23.25■■□□□ 1.31
TSKU-201ENST00000333090 CCDC115Q96NT0 180 aa23.25■■□□□ 1.31
TSKU-201ENST00000333090 ZNF382Q96SR6 550 aa23.25■■□□□ 1.31
TSKU-201ENST00000333090 YIPF2Q9BWQ6 316 aa23.25■■□□□ 1.31
TSKU-201ENST00000333090 USE1Q9NZ43 259 aa23.25■■□□□ 1.31
TSKU-201ENST00000333090 DNMT3BQ9UBC3 853 aaKnown RBP23.25■■□□□ 1.31
TSKU-201ENST00000333090 KATNA1O75449 491 aa23.24■■□□□ 1.31
TSKU-201ENST00000333090 GABARAPO95166 117 aa23.24■■□□□ 1.31
TSKU-201ENST00000333090 IL10RBQ08334 325 aa23.24■■□□□ 1.31
TSKU-201ENST00000333090 EID3Q8N140 333 aa23.24■■□□□ 1.31
TSKU-201ENST00000333090 ZCCHC7Q8N3Z6 543 aaKnown RBP23.24■■□□□ 1.31
TSKU-201ENST00000333090 NCLNQ969V3 563 aa23.24■■□□□ 1.31
TSKU-201ENST00000333090 SLC39A13Q96H72 371 aa23.24■■□□□ 1.31
TSKU-201ENST00000333090 SYT17Q9BSW7 474 aa23.24■■□□□ 1.31
TSKU-201ENST00000333090 SARS2Q9NP81 518 aaKnown RBP23.24■■□□□ 1.31
TSKU-201ENST00000333090 TRMT6Q9UJA5 497 aaKnown RBP23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms