RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 CAAP1Q9H8G2 361 aa15.65■□□□□ 0.1
PDGFB-201ENST00000331163 SLC7A8Q9UHI5 535 aa15.65■□□□□ 0.1
PDGFB-201ENST00000331163 DOLKQ9UPQ8 538 aa15.65■□□□□ 0.1
PDGFB-201ENST00000331163 PTGDR2Q9Y5Y4 395 aa15.65■□□□□ 0.1
PDGFB-201ENST00000331163 ASCC3Q8N3C0 2202 aaKnown RBP15.65■□□□□ 0.1
PDGFB-201ENST00000331163 DLX3O60479 287 aa15.65■□□□□ 0.1
PDGFB-201ENST00000331163 PENKP01210 267 aaPredicted RBP15.65■□□□□ 0.1
PDGFB-201ENST00000331163 APOA4P06727 396 aa15.65■□□□□ 0.1
PDGFB-201ENST00000331163 RBP1P09455 135 aa15.65■□□□□ 0.1
PDGFB-201ENST00000331163 C6P13671 934 aa15.65■□□□□ 0.1
PDGFB-201ENST00000331163 TIMP2P16035 220 aa15.65■□□□□ 0.1
PDGFB-201ENST00000331163 CTHP32929 405 aa15.65■□□□□ 0.1
PDGFB-201ENST00000331163 MSX2P35548 267 aaPredicted RBP15.65■□□□□ 0.1
PDGFB-201ENST00000331163 MAPK9P45984 424 aa15.65■□□□□ 0.1
PDGFB-201ENST00000331163 CDCA3Q99618 268 aaPredicted RBP15.65■□□□□ 0.1
PDGFB-201ENST00000331163 PIF1Q9H611 641 aa15.65■□□□□ 0.1
PDGFB-201ENST00000331163 CD93Q9NPY3 652 aa15.65■□□□□ 0.1
PDGFB-201ENST00000331163 HS3ST2Q9Y278 367 aa15.65■□□□□ 0.1
PDGFB-201ENST00000331163 VPS9D1Q9Y2B5 631 aa15.65■□□□□ 0.1
PDGFB-201ENST00000331163 LATS1O95835 1130 aa15.64■□□□□ 0.1
PDGFB-201ENST00000331163 EFEMP2O95967 443 aa15.64■□□□□ 0.1
PDGFB-201ENST00000331163 LINC00032P0C843 101 aa15.64■□□□□ 0.1
PDGFB-201ENST00000331163 CST6Q15828 149 aa15.64■□□□□ 0.1
PDGFB-201ENST00000331163 BRAT1Q6PJG6 821 aa15.64■□□□□ 0.1
PDGFB-201ENST00000331163 KYAT3Q6YP21 454 aaKnown RBP15.64■□□□□ 0.1
PDGFB-201ENST00000331163 FOPNLQ96NB1 174 aa15.64■□□□□ 0.1
PDGFB-201ENST00000331163 LMAN2LQ9H0V9 348 aa15.64■□□□□ 0.1
PDGFB-201ENST00000331163 TREX1Q9NSU2 369 aa15.64■□□□□ 0.1
PDGFB-201ENST00000331163 GNPTGQ9UJJ9 305 aa15.64■□□□□ 0.1
PDGFB-201ENST00000331163 IL9P15248 144 aa15.64■□□□□ 0.09
PDGFB-201ENST00000331163 CR2P20023 1033 aa15.64■□□□□ 0.09
PDGFB-201ENST00000331163 GGT5P36269 586 aa15.64■□□□□ 0.09
PDGFB-201ENST00000331163 ABCE1P61221 599 aaKnown RBP15.64■□□□□ 0.09
PDGFB-201ENST00000331163 DLG1Q12959 904 aa15.64■□□□□ 0.09
PDGFB-201ENST00000331163 RALGPS1Q5JS13 557 aa15.64■□□□□ 0.09
PDGFB-201ENST00000331163 ERN2Q76MJ5 926 aaKnown RBP15.64■□□□□ 0.09
PDGFB-201ENST00000331163 SNX20Q7Z614 316 aa15.64■□□□□ 0.09
PDGFB-201ENST00000331163 FAM3CQ92520 227 aa15.64■□□□□ 0.09
PDGFB-201ENST00000331163 ARRDC3Q96B67 414 aa15.64■□□□□ 0.09
PDGFB-201ENST00000331163 FAM83CQ9BQN1 747 aa15.64■□□□□ 0.09
PDGFB-201ENST00000331163 TUBB6Q9BUF5 446 aa15.64■□□□□ 0.09
PDGFB-201ENST00000331163 C1orf50Q9BV19 199 aa15.64■□□□□ 0.09
PDGFB-201ENST00000331163 CAPN8A6NHC0 703 aa15.64■□□□□ 0.09
PDGFB-201ENST00000331163 TSPAN6O43657 245 aa15.64■□□□□ 0.09
PDGFB-201ENST00000331163 ADRB3P13945 408 aa15.64■□□□□ 0.09
PDGFB-201ENST00000331163 TSHRP16473 764 aa15.64■□□□□ 0.09
PDGFB-201ENST00000331163 PTSQ03393 145 aa15.64■□□□□ 0.09
PDGFB-201ENST00000331163 STEAP4Q687X5 459 aa15.64■□□□□ 0.09
PDGFB-201ENST00000331163 MTSS1LQ765P7 747 aa15.64■□□□□ 0.09
PDGFB-201ENST00000331163 METTL3Q86U44 580 aaKnown RBP15.64■□□□□ 0.09
PDGFB-201ENST00000331163 IFNEQ86WN2 208 aa15.64■□□□□ 0.09
PDGFB-201ENST00000331163 STAG3L4Q8TBR4 150 aa15.64■□□□□ 0.09
PDGFB-201ENST00000331163 WFIKKN2Q8TEU8 576 aa15.64■□□□□ 0.09
PDGFB-201ENST00000331163 PTCD2Q8WV60 388 aaKnown RBP15.64■□□□□ 0.09
PDGFB-201ENST00000331163 ITFG2Q969R8 447 aa15.64■□□□□ 0.09
PDGFB-201ENST00000331163 GFM2Q969S9 779 aaKnown RBP15.64■□□□□ 0.09
PDGFB-201ENST00000331163 NUS1Q96E22 293 aa15.64■□□□□ 0.09
PDGFB-201ENST00000331163 KLHL25Q9H0H3 589 aa15.64■□□□□ 0.09
PDGFB-201ENST00000331163 SERGEFQ9UGK8 458 aa15.64■□□□□ 0.09
PDGFB-201ENST00000331163 SUN2Q9UH99 717 aa15.64■□□□□ 0.09
PDGFB-201ENST00000331163 A0A1W2PQU0 124 aa15.63■□□□□ 0.09
PDGFB-201ENST00000331163 TM7SF2O76062 418 aa15.63■□□□□ 0.09
PDGFB-201ENST00000331163 KLHL2O95198 593 aa15.63■□□□□ 0.09
PDGFB-201ENST00000331163 HNRNPCP07910 306 aaKnown RBP eCLIP15.63■□□□□ 0.09
PDGFB-201ENST00000331163 PEX2P28328 305 aa15.63■□□□□ 0.09
PDGFB-201ENST00000331163 AQP4P55087 323 aa15.63■□□□□ 0.09
PDGFB-201ENST00000331163 LPAL2Q16609 132 aa15.63■□□□□ 0.09
PDGFB-201ENST00000331163 UBE2R2Q712K3 238 aaPredicted RBP15.63■□□□□ 0.09
PDGFB-201ENST00000331163 HEATR4Q86WZ0 1026 aa15.63■□□□□ 0.09
PDGFB-201ENST00000331163 HID1Q8IV36 788 aa15.63■□□□□ 0.09
PDGFB-201ENST00000331163 METTL6Q8TCB7 284 aa15.63■□□□□ 0.09
PDGFB-201ENST00000331163 MAGEE1Q9HCI5 957 aa15.63■□□□□ 0.09
PDGFB-201ENST00000331163 THAP1Q9NVV9 213 aa15.63■□□□□ 0.09
PDGFB-201ENST00000331163 KLQ9UEF7 1012 aa15.63■□□□□ 0.09
PDGFB-201ENST00000331163 TRAFD1O14545 582 aaPredicted RBP15.63■□□□□ 0.09
PDGFB-201ENST00000331163 HNRNPCL1O60812 293 aaKnown RBP15.63■□□□□ 0.09
PDGFB-201ENST00000331163 ASLP04424 464 aa15.63■□□□□ 0.09
PDGFB-201ENST00000331163 VIPR1P32241 457 aa15.63■□□□□ 0.09
PDGFB-201ENST00000331163 OPRD1P41143 372 aa15.63■□□□□ 0.09
PDGFB-201ENST00000331163 SPINT3P49223 89 aa15.63■□□□□ 0.09
PDGFB-201ENST00000331163 INPP5AQ14642 412 aa15.63■□□□□ 0.09
PDGFB-201ENST00000331163 CCDC153Q494R4 210 aa15.63■□□□□ 0.09
PDGFB-201ENST00000331163 UGT3A1Q6NUS8 523 aa15.63■□□□□ 0.09
PDGFB-201ENST00000331163 ZNF549Q6P9A3 640 aa15.63■□□□□ 0.09
PDGFB-201ENST00000331163 ZNF783Q6ZMS7 281 aa15.63■□□□□ 0.09
PDGFB-201ENST00000331163 ACAD11Q709F0 780 aa15.63■□□□□ 0.09
PDGFB-201ENST00000331163 SZRD1Q7Z422 152 aa15.63■□□□□ 0.09
PDGFB-201ENST00000331163 NXPE1Q8N323 547 aa15.63■□□□□ 0.09
PDGFB-201ENST00000331163 LKAAEAR1Q8TD35 194 aa15.63■□□□□ 0.09
PDGFB-201ENST00000331163 MRPL40Q9NQ50 206 aaKnown RBP15.63■□□□□ 0.09
PDGFB-201ENST00000331163 PRSS16Q9NQE7 514 aa15.63■□□□□ 0.09
PDGFB-201ENST00000331163 EURLQ9NYK6 297 aa15.63■□□□□ 0.09
PDGFB-201ENST00000331163 AHCTF1Q8WYP5 2266 aa15.63■□□□□ 0.09
PDGFB-201ENST00000331163 SPAG17Q6Q759 2223 aa15.63■□□□□ 0.09
PDGFB-201ENST00000331163 TPRP12270 2363 aaKnown RBP15.63■□□□□ 0.09
PDGFB-201ENST00000331163 SH3BP5O60239 455 aa15.63■□□□□ 0.09
PDGFB-201ENST00000331163 RASGRP1O95267 797 aa15.63■□□□□ 0.09
PDGFB-201ENST00000331163 CA5AP35218 305 aa15.63■□□□□ 0.09
PDGFB-201ENST00000331163 C1orf61Q13536 156 aa15.63■□□□□ 0.09
PDGFB-201ENST00000331163 PLCL1Q15111 1095 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms