RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 AKIP1Q9NQ31 210 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 GDAP2Q9NXN4 497 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 CD274Q9NZQ7 290 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 HACD3Q9P035 362 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 RBPJLQ9UBG7 517 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 MICAL3Q7RTP6 2002 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 UGT2B11O75310 529 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 USP2O75604 605 aaPredicted RBP7.78□□□□□ -1.16
VMA21-201ENST00000330374 ANGPTL1O95841 491 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 CNPP09543 421 aaKnown RBP7.78□□□□□ -1.16
VMA21-201ENST00000330374 HAPLN1P10915 354 aaPredicted RBP7.78□□□□□ -1.16
VMA21-201ENST00000330374 ZNF37AP17032 561 aaPredicted RBP7.78□□□□□ -1.16
VMA21-201ENST00000330374 JUNBP17275 347 aaPredicted RBP7.78□□□□□ -1.16
VMA21-201ENST00000330374 DNAJB1P25685 340 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 PNPLA4P41247 253 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 MAPK9P45984 424 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 RAPSNQ13702 412 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 IHHQ14623 411 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 DGUOKQ16854 277 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 SIRPB2Q5JXA9 342 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 THOC7Q6I9Y2 204 aaKnown RBP7.78□□□□□ -1.16
VMA21-201ENST00000330374 DET1Q7L5Y6 550 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 HID1Q8IV36 788 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 LINC01465Q8N7H1 131 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 KCTD13Q8WZ19 329 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 HDAC2Q92769 488 aaKnown RBP7.78□□□□□ -1.16
VMA21-201ENST00000330374 SLC47A1Q96FL8 570 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 AURKBQ96GD4 344 aaPredicted RBP7.78□□□□□ -1.16
VMA21-201ENST00000330374 ACTR8Q9H981 624 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 AIG1Q9NVV5 245 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 ACTR10Q9NZ32 417 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 ZIM2Q9NZV7 527 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 SCHIP1Q9P0W5 487 aaPredicted RBP7.78□□□□□ -1.16
VMA21-201ENST00000330374 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.78□□□□□ -1.16
VMA21-201ENST00000330374 DERAQ9Y315 318 aa7.78□□□□□ -1.16
VMA21-201ENST00000330374 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.77□□□□□ -1.16
VMA21-201ENST00000330374 EIF1AYO14602 144 aaKnown RBP7.77□□□□□ -1.16
VMA21-201ENST00000330374 SNPHO15079 494 aa7.77□□□□□ -1.16
VMA21-201ENST00000330374 CNMDO75829 334 aa7.77□□□□□ -1.16
VMA21-201ENST00000330374 MATN4O95460 622 aa7.77□□□□□ -1.16
VMA21-201ENST00000330374 GSNP06396 782 aa7.77□□□□□ -1.16
VMA21-201ENST00000330374 C7P10643 843 aa7.77□□□□□ -1.16
VMA21-201ENST00000330374 DBTP11182 482 aaKnown RBP7.77□□□□□ -1.16
VMA21-201ENST00000330374 PFKLP17858 780 aa7.77□□□□□ -1.16
VMA21-201ENST00000330374 VAMP1P23763 118 aa7.77□□□□□ -1.16
VMA21-201ENST00000330374 EEFSECP57772 596 aaKnown RBP7.77□□□□□ -1.16
VMA21-201ENST00000330374 PRKG2Q13237 762 aa7.77□□□□□ -1.16
VMA21-201ENST00000330374 GTDC1Q4AE62 458 aa7.77□□□□□ -1.16
VMA21-201ENST00000330374 ATAD3BQ5T9A4 648 aa7.77□□□□□ -1.16
VMA21-201ENST00000330374 MICU2Q8IYU8 434 aa7.77□□□□□ -1.16
VMA21-201ENST00000330374 OR2T12Q8NG77 320 aa7.77□□□□□ -1.16
VMA21-201ENST00000330374 PROKR1Q8TCW9 393 aa7.77□□□□□ -1.16
VMA21-201ENST00000330374 AGO3Q9H9G7 860 aaKnown RBP7.77□□□□□ -1.16
VMA21-201ENST00000330374 ZFP14Q9HCL3 533 aa7.77□□□□□ -1.16
VMA21-201ENST00000330374 CAB39Q9Y376 341 aaPredicted RBP7.77□□□□□ -1.16
VMA21-201ENST00000330374 LINC00854A0A1B0GVQ3 168 aa7.77□□□□□ -1.17
VMA21-201ENST00000330374 FFAR3O14843 346 aa7.77□□□□□ -1.17
VMA21-201ENST00000330374 GPR42O15529 346 aa7.77□□□□□ -1.17
VMA21-201ENST00000330374 EEDO75530 441 aaKnown RBP7.77□□□□□ -1.17
VMA21-201ENST00000330374 TGM1P22735 817 aa7.77□□□□□ -1.17
VMA21-201ENST00000330374 GALNT1Q10472 559 aaPredicted RBP7.77□□□□□ -1.17
VMA21-201ENST00000330374 TOMM20Q15388 145 aa7.77□□□□□ -1.17
VMA21-201ENST00000330374 NPTX1Q15818 432 aa7.77□□□□□ -1.17
VMA21-201ENST00000330374 C6orf136Q5SQH8 315 aa7.77□□□□□ -1.17
VMA21-201ENST00000330374 DEPDC1Q5TB30 811 aa7.77□□□□□ -1.17
VMA21-201ENST00000330374 MARC1Q5VT66 337 aa7.77□□□□□ -1.17
VMA21-201ENST00000330374 PM20D1Q6GTS8 502 aa7.77□□□□□ -1.17
VMA21-201ENST00000330374 P2RY8Q86VZ1 359 aa7.77□□□□□ -1.17
VMA21-201ENST00000330374 PROSER1Q86XN7 944 aa7.77□□□□□ -1.17
VMA21-201ENST00000330374 CCDC103Q8IW40 242 aa7.77□□□□□ -1.17
VMA21-201ENST00000330374 UBE2FQ969M7 185 aa7.77□□□□□ -1.17
VMA21-201ENST00000330374 PSMG2Q969U7 264 aa7.77□□□□□ -1.17
VMA21-201ENST00000330374 MUL1Q969V5 352 aa7.77□□□□□ -1.17
VMA21-201ENST00000330374 MYLPFQ96A32 169 aa7.77□□□□□ -1.17
VMA21-201ENST00000330374 HMCESQ96FZ2 354 aa7.77□□□□□ -1.17
VMA21-201ENST00000330374 TSGA13Q96PP4 275 aa7.77□□□□□ -1.17
VMA21-201ENST00000330374 FAM124BQ9H5Z6 455 aaPredicted RBP7.77□□□□□ -1.17
VMA21-201ENST00000330374 CATSPERBQ9H7T0 1116 aa7.77□□□□□ -1.17
VMA21-201ENST00000330374 AMBNQ9NP70 447 aa7.77□□□□□ -1.17
VMA21-201ENST00000330374 SLC52A3Q9NQ40 469 aa7.77□□□□□ -1.17
VMA21-201ENST00000330374 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.77□□□□□ -1.17
VMA21-201ENST00000330374 MAGEL2Q9UJ55 1249 aa7.77□□□□□ -1.17
VMA21-201ENST00000330374 IPPQ9Y573 584 aa7.77□□□□□ -1.17
VMA21-201ENST00000330374 NOX1Q9Y5S8 564 aa7.77□□□□□ -1.17
VMA21-201ENST00000330374 PMF1-BGLAPU3KQ54 211 aa7.77□□□□□ -1.17
VMA21-201ENST00000330374 SBF1O95248 1867 aa7.77□□□□□ -1.17
VMA21-201ENST00000330374 TRIM64BA6NI03 449 aa7.77□□□□□ -1.17
VMA21-201ENST00000330374 BCKDKO14874 412 aa7.77□□□□□ -1.17
VMA21-201ENST00000330374 WARSP23381 471 aaKnown RBP7.77□□□□□ -1.17
VMA21-201ENST00000330374 CLK1P49759 484 aaKnown RBP7.77□□□□□ -1.17
VMA21-201ENST00000330374 CDKN1CP49918 316 aaPredicted RBP7.77□□□□□ -1.17
VMA21-201ENST00000330374 CLCNKBP51801 687 aa7.77□□□□□ -1.17
VMA21-201ENST00000330374 PTGR1Q14914 329 aa7.77□□□□□ -1.17
VMA21-201ENST00000330374 LAIR2Q6ISS4 152 aa7.77□□□□□ -1.17
VMA21-201ENST00000330374 VASH1Q7L8A9 365 aaPredicted RBP7.77□□□□□ -1.17
VMA21-201ENST00000330374 GALNT10Q86SR1 603 aa7.77□□□□□ -1.17
VMA21-201ENST00000330374 AKAP14Q86UN6 197 aa7.77□□□□□ -1.17
VMA21-201ENST00000330374 PTRH1Q86Y79 214 aaKnown RBP7.77□□□□□ -1.17
VMA21-201ENST00000330374 SCN4BQ8IWT1 228 aa7.77□□□□□ -1.17
VMA21-201ENST00000330374 RIMKLAQ8IXN7 391 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms