RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 PCDHB1Q9Y5F3 818 aa16.21■□□□□ 0.19
PDLIM1-201ENST00000329399 C1orf232A0A0U1RR37 186 aa16.2■□□□□ 0.18
PDLIM1-201ENST00000329399 H3BMM5 538 aa16.2■□□□□ 0.18
PDLIM1-201ENST00000329399 AURKAO14965 403 aa16.2■□□□□ 0.18
PDLIM1-201ENST00000329399 SCAMP1O15126 338 aa16.2■□□□□ 0.18
PDLIM1-201ENST00000329399 DFNA5O60443 496 aa16.2■□□□□ 0.18
PDLIM1-201ENST00000329399 CLDN7O95471 211 aa16.2■□□□□ 0.18
PDLIM1-201ENST00000329399 ESR1P03372 595 aa16.2■□□□□ 0.18
PDLIM1-201ENST00000329399 MYF5P13349 255 aa16.2■□□□□ 0.18
PDLIM1-201ENST00000329399 CPA3P15088 417 aa16.2■□□□□ 0.18
PDLIM1-201ENST00000329399 SPINK2P20155 84 aa16.2■□□□□ 0.18
PDLIM1-201ENST00000329399 ITGALP20701 1170 aa16.2■□□□□ 0.18
PDLIM1-201ENST00000329399 MC4RP32245 332 aa16.2■□□□□ 0.18
PDLIM1-201ENST00000329399 ARRB1P49407 418 aaPredicted RBP16.2■□□□□ 0.18
PDLIM1-201ENST00000329399 TAS2R39P59534 338 aa16.2■□□□□ 0.18
PDLIM1-201ENST00000329399 TMPRSS15P98073 1019 aa16.2■□□□□ 0.18
PDLIM1-201ENST00000329399 LRRC66Q68CR7 880 aa16.2■□□□□ 0.18
PDLIM1-201ENST00000329399 LYSMD3Q7Z3D4 306 aa16.2■□□□□ 0.18
PDLIM1-201ENST00000329399 SNX20Q7Z614 316 aa16.2■□□□□ 0.18
PDLIM1-201ENST00000329399 TECPR1Q7Z6L1 1165 aa16.2■□□□□ 0.18
PDLIM1-201ENST00000329399 RBFAQ8N0V3 343 aa16.2■□□□□ 0.18
PDLIM1-201ENST00000329399 ATXN7L3BQ96GX2 97 aa16.2■□□□□ 0.18
PDLIM1-201ENST00000329399 C7orf26Q96N11 449 aa16.2■□□□□ 0.18
PDLIM1-201ENST00000329399 MRPL57Q9BQC6 102 aaKnown RBP16.2■□□□□ 0.18
PDLIM1-201ENST00000329399 SIKE1Q9BRV8 207 aa16.2■□□□□ 0.18
PDLIM1-201ENST00000329399 APOOQ9BUR5 198 aa16.2■□□□□ 0.18
PDLIM1-201ENST00000329399 SLC32A1Q9H598 525 aa16.2■□□□□ 0.18
PDLIM1-201ENST00000329399 FGFR1OP2Q9NVK5 253 aa16.2■□□□□ 0.18
PDLIM1-201ENST00000329399 TAS2R13Q9NYV9 303 aa16.2■□□□□ 0.18
PDLIM1-201ENST00000329399 COPG2Q9UBF2 871 aa16.2■□□□□ 0.18
PDLIM1-201ENST00000329399 CD84Q9UIB8 345 aa16.2■□□□□ 0.18
PDLIM1-201ENST00000329399 WASF3Q9UPY6 502 aa16.2■□□□□ 0.18
PDLIM1-201ENST00000329399 DMXL2Q8TDJ6 3036 aa16.2■□□□□ 0.18
PDLIM1-201ENST00000329399 LAMA5O15230 3695 aa16.2■□□□□ 0.18
PDLIM1-201ENST00000329399 FLRT2O43155 660 aa16.19■□□□□ 0.18
PDLIM1-201ENST00000329399 MAGEC1O60732 1142 aa16.19■□□□□ 0.18
PDLIM1-201ENST00000329399 PIAS2O75928 621 aa16.19■□□□□ 0.18
PDLIM1-201ENST00000329399 CSF2P04141 144 aa16.19■□□□□ 0.18
PDLIM1-201ENST00000329399 CELA2BP08218 269 aaPredicted RBP16.19■□□□□ 0.18
PDLIM1-201ENST00000329399 C1SP09871 688 aa16.19■□□□□ 0.18
PDLIM1-201ENST00000329399 LTA4HP09960 611 aaKnown RBP16.19■□□□□ 0.18
PDLIM1-201ENST00000329399 FDXRP22570 491 aa16.19■□□□□ 0.18
PDLIM1-201ENST00000329399 SPAM1P38567 509 aa16.19■□□□□ 0.18
PDLIM1-201ENST00000329399 XIAPP98170 497 aa16.19■□□□□ 0.18
PDLIM1-201ENST00000329399 SUZ12Q15022 739 aaKnown RBP16.19■□□□□ 0.18
PDLIM1-201ENST00000329399 ACAP2Q15057 778 aa16.19■□□□□ 0.18
PDLIM1-201ENST00000329399 TCEA2Q15560 299 aa16.19■□□□□ 0.18
PDLIM1-201ENST00000329399 SPATA21Q7Z572 469 aa16.19■□□□□ 0.18
PDLIM1-201ENST00000329399 YTHDF3Q7Z739 585 aaKnown RBP16.19■□□□□ 0.18
PDLIM1-201ENST00000329399 PPP1R14CQ8TAE6 165 aa16.19■□□□□ 0.18
PDLIM1-201ENST00000329399 LPGAT1Q92604 370 aa16.19■□□□□ 0.18
PDLIM1-201ENST00000329399 SCAMP4Q969E2 229 aa16.19■□□□□ 0.18
PDLIM1-201ENST00000329399 TSACCQ96A04 125 aaPredicted RBP16.19■□□□□ 0.18
PDLIM1-201ENST00000329399 ULK4Q96C45 1275 aa16.19■□□□□ 0.18
PDLIM1-201ENST00000329399 UBXN10Q96LJ8 280 aa16.19■□□□□ 0.18
PDLIM1-201ENST00000329399 AARSD1Q9BTE6 412 aaKnown RBP16.19■□□□□ 0.18
PDLIM1-201ENST00000329399 TSSK1BQ9BXA7 367 aa16.19■□□□□ 0.18
PDLIM1-201ENST00000329399 FAM96AQ9H5X1 160 aa16.19■□□□□ 0.18
PDLIM1-201ENST00000329399 SUDS3Q9H7L9 328 aaPredicted RBP16.19■□□□□ 0.18
PDLIM1-201ENST00000329399 THAP1Q9NVV9 213 aa16.19■□□□□ 0.18
PDLIM1-201ENST00000329399 TMEM216Q9P0N5 145 aa16.19■□□□□ 0.18
PDLIM1-201ENST00000329399 MARCH4Q9P2E8 410 aaPredicted RBP16.19■□□□□ 0.18
PDLIM1-201ENST00000329399 NFKBIL1Q9UBC1 381 aaPredicted RBP16.19■□□□□ 0.18
PDLIM1-201ENST00000329399 FKBPLQ9UIM3 349 aa16.19■□□□□ 0.18
PDLIM1-201ENST00000329399 EMCNQ9ULC0 261 aa16.19■□□□□ 0.18
PDLIM1-201ENST00000329399 ARL2BPQ9Y2Y0 163 aa16.19■□□□□ 0.18
PDLIM1-201ENST00000329399 ASXL3Q9C0F0 2248 aa16.19■□□□□ 0.18
PDLIM1-201ENST00000329399 ZZEF1O43149 2961 aa16.19■□□□□ 0.18
PDLIM1-201ENST00000329399 IGF2RP11717 2491 aa16.18■□□□□ 0.18
PDLIM1-201ENST00000329399 TMEM202A6NGA9 273 aa16.18■□□□□ 0.18
PDLIM1-201ENST00000329399 F8W8V4 182 aa16.18■□□□□ 0.18
PDLIM1-201ENST00000329399 FUCA1P04066 466 aa16.18■□□□□ 0.18
PDLIM1-201ENST00000329399 ZNF7P17097 686 aaPredicted RBP16.18■□□□□ 0.18
PDLIM1-201ENST00000329399 RPS3P23396 243 aaKnown RBP eCLIP16.18■□□□□ 0.182e-8■■■□□ 16.1
PDLIM1-201ENST00000329399 TRIM23P36406 574 aa16.18■□□□□ 0.18
PDLIM1-201ENST00000329399 SERPINB5P36952 375 aa16.18■□□□□ 0.18
PDLIM1-201ENST00000329399 GRK6P43250 576 aa16.18■□□□□ 0.18
PDLIM1-201ENST00000329399 STX3Q13277 289 aa16.18■□□□□ 0.18
PDLIM1-201ENST00000329399 C1orf61Q13536 156 aa16.18■□□□□ 0.18
PDLIM1-201ENST00000329399 PEX6Q13608 980 aa16.18■□□□□ 0.18
PDLIM1-201ENST00000329399 ITGA9Q13797 1035 aa16.18■□□□□ 0.18
PDLIM1-201ENST00000329399 ARHGEF7Q14155 803 aa16.18■□□□□ 0.18
PDLIM1-201ENST00000329399 ZRANB3Q5FWF4 1079 aa16.18■□□□□ 0.18
PDLIM1-201ENST00000329399 PNCKQ6P2M8 343 aa16.18■□□□□ 0.18
PDLIM1-201ENST00000329399 DCP2Q8IU60 420 aaKnown RBP16.18■□□□□ 0.18
PDLIM1-201ENST00000329399 KIRREL3Q8IZU9 778 aa16.18■□□□□ 0.18
PDLIM1-201ENST00000329399 DTD2Q96FN9 168 aa16.18■□□□□ 0.18
PDLIM1-201ENST00000329399 ELAC2Q9BQ52 826 aaKnown RBP16.18■□□□□ 0.18
PDLIM1-201ENST00000329399 ABCG8Q9H221 673 aa16.18■□□□□ 0.18
PDLIM1-201ENST00000329399 MRPL46Q9H2W6 279 aaKnown RBP16.18■□□□□ 0.18
PDLIM1-201ENST00000329399 CAB39LQ9H9S4 337 aa16.18■□□□□ 0.18
PDLIM1-201ENST00000329399 GPAMQ9HCL2 828 aa16.18■□□□□ 0.18
PDLIM1-201ENST00000329399 PKD2L2Q9NZM6 624 aa16.18■□□□□ 0.18
PDLIM1-201ENST00000329399 KLHL14Q9P2G3 628 aa16.18■□□□□ 0.18
PDLIM1-201ENST00000329399 RUVBL2Q9Y230 463 aaKnown RBP16.18■□□□□ 0.18
PDLIM1-201ENST00000329399 TRBV5-4A0A0C4DH59 114 aa16.17■□□□□ 0.18
PDLIM1-201ENST00000329399 AGAP14A8MT82 685 aa16.17■□□□□ 0.18
PDLIM1-201ENST00000329399 PSMD11O00231 422 aa16.17■□□□□ 0.18
PDLIM1-201ENST00000329399 FFAR2O15552 330 aa16.17■□□□□ 0.18
PDLIM1-201ENST00000329399 BUD23O43709 281 aaKnown RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms