RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 REM2Q8IYK8 340 aaPredicted RBP12.6□□□□□ -0.39
CCDC60-201ENST00000327554 UBQLNLQ8IYU4 475 aa12.6□□□□□ -0.39
CCDC60-201ENST00000327554 AADATQ8N5Z0 425 aa12.6□□□□□ -0.39
CCDC60-201ENST00000327554 SIMC1Q8NDZ2 872 aa12.6□□□□□ -0.39
CCDC60-201ENST00000327554 ZNF548Q8NEK5 533 aaPredicted RBP12.6□□□□□ -0.39
CCDC60-201ENST00000327554 COLEC11Q9BWP8 271 aa12.6□□□□□ -0.39
CCDC60-201ENST00000327554 ULBP1Q9BZM6 244 aa12.6□□□□□ -0.39
CCDC60-201ENST00000327554 RGS18Q9NS28 235 aa12.6□□□□□ -0.39
CCDC60-201ENST00000327554 ZNF225Q9UK10 706 aa12.6□□□□□ -0.39
CCDC60-201ENST00000327554 AGO1Q9UL18 857 aaKnown RBP12.6□□□□□ -0.39
CCDC60-201ENST00000327554 BOLA1Q9Y3E2 137 aa12.6□□□□□ -0.39
CCDC60-201ENST00000327554 A3GALT2U3KPV4 340 aa12.6□□□□□ -0.39
CCDC60-201ENST00000327554 GBF1Q92538 1859 aa12.6□□□□□ -0.39
CCDC60-201ENST00000327554 PDZK1P1A8MUH7 402 aa12.6□□□□□ -0.39
CCDC60-201ENST00000327554 ARNTLO00327 626 aa12.6□□□□□ -0.39
CCDC60-201ENST00000327554 DSCR3O14972 297 aa12.6□□□□□ -0.39
CCDC60-201ENST00000327554 SLC7A4O43246 635 aa12.6□□□□□ -0.39
CCDC60-201ENST00000327554 ZW10O43264 779 aa12.6□□□□□ -0.39
CCDC60-201ENST00000327554 CRCPO75575 148 aa12.6□□□□□ -0.39
CCDC60-201ENST00000327554 ITGB6P18564 788 aa12.6□□□□□ -0.39
CCDC60-201ENST00000327554 ARSDP51689 593 aa12.6□□□□□ -0.39
CCDC60-201ENST00000327554 OR2B6P58173 313 aa12.6□□□□□ -0.39
CCDC60-201ENST00000327554 SNAP47Q5SQN1 464 aa12.6□□□□□ -0.39
CCDC60-201ENST00000327554 CELF3Q5SZQ8 465 aaKnown RBP12.6□□□□□ -0.39
CCDC60-201ENST00000327554 PM20D1Q6GTS8 502 aa12.6□□□□□ -0.39
CCDC60-201ENST00000327554 CAPN13Q6MZZ7 669 aaPredicted RBP12.6□□□□□ -0.39
CCDC60-201ENST00000327554 ZCCHC8Q6NZY4 707 aaKnown RBP12.6□□□□□ -0.39
CCDC60-201ENST00000327554 SYVN1Q86TM6 617 aa12.6□□□□□ -0.39
CCDC60-201ENST00000327554 GATAD2AQ86YP4 633 aa12.6□□□□□ -0.39
CCDC60-201ENST00000327554 ADHFE1Q8IWW8 467 aa12.6□□□□□ -0.39
CCDC60-201ENST00000327554 ATPAF2Q8N5M1 289 aa12.6□□□□□ -0.39
CCDC60-201ENST00000327554 SETD9Q8NE22 299 aa12.6□□□□□ -0.39
CCDC60-201ENST00000327554 CHST13Q8NET6 341 aa12.6□□□□□ -0.39
CCDC60-201ENST00000327554 OR2T12Q8NG77 320 aa12.6□□□□□ -0.39
CCDC60-201ENST00000327554 RHEBL1Q8TAI7 183 aa12.6□□□□□ -0.39
CCDC60-201ENST00000327554 PGAP3Q96FM1 320 aaPredicted RBP12.6□□□□□ -0.39
CCDC60-201ENST00000327554 ST6GAL2Q96JF0 529 aa12.6□□□□□ -0.39
CCDC60-201ENST00000327554 SIGLEC11Q96RL6 698 aa12.6□□□□□ -0.39
CCDC60-201ENST00000327554 CDADC1Q9BWV3 514 aa12.6□□□□□ -0.39
CCDC60-201ENST00000327554 NUSAP1Q9BXS6 441 aaKnown RBP12.6□□□□□ -0.39
CCDC60-201ENST00000327554 TM9SF3Q9HD45 589 aa12.6□□□□□ -0.39
CCDC60-201ENST00000327554 DDX28Q9NUL7 540 aaKnown RBP12.6□□□□□ -0.39
CCDC60-201ENST00000327554 SCN3BQ9NY72 215 aa12.6□□□□□ -0.39
CCDC60-201ENST00000327554 SNTG2Q9NY99 539 aa12.6□□□□□ -0.39
CCDC60-201ENST00000327554 CRYL1Q9Y2S2 319 aa12.6□□□□□ -0.39
CCDC60-201ENST00000327554 OR51F1A6NGY5 319 aa12.59□□□□□ -0.39
CCDC60-201ENST00000327554 GOLGA8CPA6NN73 597 aa12.59□□□□□ -0.39
CCDC60-201ENST00000327554 MAFKO60675 156 aa12.59□□□□□ -0.39
CCDC60-201ENST00000327554 LIPAP38571 399 aa12.59□□□□□ -0.39
CCDC60-201ENST00000327554 CLK1P49759 484 aaKnown RBP12.59□□□□□ -0.39
CCDC60-201ENST00000327554 SCNN1GP51170 649 aa12.59□□□□□ -0.39
CCDC60-201ENST00000327554 KRR1Q13601 381 aaKnown RBP12.59□□□□□ -0.39
CCDC60-201ENST00000327554 PLA2G4EQ3MJ16 856 aa12.59□□□□□ -0.39
CCDC60-201ENST00000327554 ATP6AP1LQ52LC2 224 aa12.59□□□□□ -0.39
CCDC60-201ENST00000327554 C6orf136Q5SQH8 315 aa12.59□□□□□ -0.39
CCDC60-201ENST00000327554 NXNL2Q5VZ03 156 aa12.59□□□□□ -0.39
CCDC60-201ENST00000327554 CLEC20AQ6ZU45 233 aa12.59□□□□□ -0.39
CCDC60-201ENST00000327554 CTU1Q7Z7A3 348 aaKnown RBP12.59□□□□□ -0.39
CCDC60-201ENST00000327554 GALNT5Q7Z7M9 940 aa12.59□□□□□ -0.39
CCDC60-201ENST00000327554 CYP4Z1Q86W10 505 aa12.59□□□□□ -0.39
CCDC60-201ENST00000327554 OSTM1Q86WC4 334 aa12.59□□□□□ -0.39
CCDC60-201ENST00000327554 LINC01465Q8N7H1 131 aa12.59□□□□□ -0.39
CCDC60-201ENST00000327554 B3GALNT2Q8NCR0 500 aa12.59□□□□□ -0.39
CCDC60-201ENST00000327554 ZNF540Q8NDQ6 660 aa12.59□□□□□ -0.39
CCDC60-201ENST00000327554 SLC38A4Q969I6 547 aa12.59□□□□□ -0.39
CCDC60-201ENST00000327554 ACOX2Q99424 681 aa12.59□□□□□ -0.39
CCDC60-201ENST00000327554 TMEM246Q9BRR3 403 aa12.59□□□□□ -0.39
CCDC60-201ENST00000327554 TKTL2Q9H0I9 626 aa12.59□□□□□ -0.39
CCDC60-201ENST00000327554 ACTL8Q9H568 366 aa12.59□□□□□ -0.39
CCDC60-201ENST00000327554 TMEM45AQ9NWC5 275 aa12.59□□□□□ -0.39
CCDC60-201ENST00000327554 NEU3Q9UQ49 428 aa12.59□□□□□ -0.39
CCDC60-201ENST00000327554 ORC6Q9Y5N6 252 aa12.59□□□□□ -0.39
CCDC60-201ENST00000327554 U3KQV3 271 aa12.59□□□□□ -0.39
CCDC60-201ENST00000327554 CCRL2O00421 344 aa12.59□□□□□ -0.39
CCDC60-201ENST00000327554 GSTA4O15217 222 aa12.59□□□□□ -0.39
CCDC60-201ENST00000327554 DFNA5O60443 496 aa12.59□□□□□ -0.39
CCDC60-201ENST00000327554 CRYZL1O95825 349 aa12.59□□□□□ -0.39
CCDC60-201ENST00000327554 ZNF37AP17032 561 aaPredicted RBP12.59□□□□□ -0.39
CCDC60-201ENST00000327554 P2RX3P56373 397 aa12.59□□□□□ -0.39
CCDC60-201ENST00000327554 DAOAP59103 153 aa12.59□□□□□ -0.39
CCDC60-201ENST00000327554 MRPS15P82914 257 aaKnown RBP12.59□□□□□ -0.39
CCDC60-201ENST00000327554 PWP1Q13610 501 aa12.59□□□□□ -0.39
CCDC60-201ENST00000327554 SIM2Q14190 667 aaPredicted RBP12.59□□□□□ -0.39
CCDC60-201ENST00000327554 KCTD2Q14681 263 aa12.59□□□□□ -0.39
CCDC60-201ENST00000327554 PCSK7Q16549 785 aa12.59□□□□□ -0.39
CCDC60-201ENST00000327554 ZFP69Q49AA0 526 aa12.59□□□□□ -0.39
CCDC60-201ENST00000327554 FBXO47Q5MNV8 452 aa12.59□□□□□ -0.39
CCDC60-201ENST00000327554 KDELC1Q6UW63 502 aa12.59□□□□□ -0.39
CCDC60-201ENST00000327554 GALNT12Q8IXK2 581 aa12.59□□□□□ -0.39
CCDC60-201ENST00000327554 ANKK1Q8NFD2 765 aa12.59□□□□□ -0.39
CCDC60-201ENST00000327554 OR8J3Q8NGG0 315 aa12.59□□□□□ -0.39
CCDC60-201ENST00000327554 GDF15Q99988 308 aa12.59□□□□□ -0.39
CCDC60-201ENST00000327554 CLPBQ9H078 707 aa12.59□□□□□ -0.39
CCDC60-201ENST00000327554 CNGB3Q9NQW8 809 aa12.59□□□□□ -0.39
CCDC60-201ENST00000327554 VNN3Q9NY84 501 aa12.59□□□□□ -0.39
CCDC60-201ENST00000327554 VAPAQ9P0L0 249 aa12.59□□□□□ -0.39
CCDC60-201ENST00000327554 AKT3Q9Y243 479 aa12.59□□□□□ -0.39
CCDC60-201ENST00000327554 PKP3Q9Y446 797 aa12.59□□□□□ -0.39
CCDC60-201ENST00000327554 PCDHGB6Q9Y5F9 930 aa12.59□□□□□ -0.39
CCDC60-201ENST00000327554 AP3D1O14617 1153 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms