RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 CLDN23Q96B33 292 aa12.56□□□□□ -0.4
DDX39A-202ENST00000324340 NXNL1Q96CM4 212 aa12.56□□□□□ -0.4
DDX39A-202ENST00000324340 DGCR14Q96DF8 476 aaKnown RBP12.56□□□□□ -0.4
DDX39A-202ENST00000324340 TSNARE1Q96NA8 513 aa12.56□□□□□ -0.4
DDX39A-202ENST00000324340 ASB2Q96Q27 587 aa12.56□□□□□ -0.4
DDX39A-202ENST00000324340 GPR21Q99679 349 aa12.56□□□□□ -0.4
DDX39A-202ENST00000324340 CADM1Q9BY67 442 aaKnown RBP12.56□□□□□ -0.4
DDX39A-202ENST00000324340 NMRAL1Q9HBL8 299 aa12.56□□□□□ -0.4
DDX39A-202ENST00000324340 ZNF358Q9NW07 568 aa12.56□□□□□ -0.4
DDX39A-202ENST00000324340 GALPQ9UBC7 116 aa12.56□□□□□ -0.4
DDX39A-202ENST00000324340 DHRS7Q9Y394 339 aa12.56□□□□□ -0.4
DDX39A-202ENST00000324340 A0A1B0GVG6 124 aa12.56□□□□□ -0.4
DDX39A-202ENST00000324340 QSOX1O00391 747 aa12.56□□□□□ -0.4
DDX39A-202ENST00000324340 SGTAO43765 313 aa12.56□□□□□ -0.4
DDX39A-202ENST00000324340 SBK3P0C264 359 aa12.56□□□□□ -0.4
DDX39A-202ENST00000324340 RALBP11234 206 aa12.56□□□□□ -0.4
DDX39A-202ENST00000324340 CHRM3P20309 590 aa12.56□□□□□ -0.4
DDX39A-202ENST00000324340 RPS9P46781 194 aaKnown RBP12.56□□□□□ -0.4
DDX39A-202ENST00000324340 FGL2Q14314 439 aa12.56□□□□□ -0.4
DDX39A-202ENST00000324340 CSHL1Q14406 222 aa12.56□□□□□ -0.4
DDX39A-202ENST00000324340 ACAP2Q15057 778 aa12.56□□□□□ -0.4
DDX39A-202ENST00000324340 TBCCQ15814 346 aa12.56□□□□□ -0.4
DDX39A-202ENST00000324340 FAM83EQ2M2I3 478 aa12.56□□□□□ -0.4
DDX39A-202ENST00000324340 AGAP9Q5VTM2 703 aa12.56□□□□□ -0.4
DDX39A-202ENST00000324340 LRRC8EQ6NSJ5 796 aa12.56□□□□□ -0.4
DDX39A-202ENST00000324340 PNCKQ6P2M8 343 aa12.56□□□□□ -0.4
DDX39A-202ENST00000324340 C16orf46Q6P387 395 aa12.56□□□□□ -0.4
DDX39A-202ENST00000324340 PAQR3Q6TCH7 311 aa12.56□□□□□ -0.4
DDX39A-202ENST00000324340 KIAA1324Q6UXG2 1013 aaKnown RBP12.56□□□□□ -0.4
DDX39A-202ENST00000324340 ADAMTSL4Q6UY14 1074 aa12.56□□□□□ -0.4
DDX39A-202ENST00000324340 TRIM67Q6ZTA4 783 aa12.56□□□□□ -0.4
DDX39A-202ENST00000324340 TRIM69Q86WT6 500 aa12.56□□□□□ -0.4
DDX39A-202ENST00000324340 HORMAD1Q86X24 394 aa12.56□□□□□ -0.4
DDX39A-202ENST00000324340 PHYKPLQ8IUZ5 450 aa12.56□□□□□ -0.4
DDX39A-202ENST00000324340 TRIM42Q8IWZ5 723 aa12.56□□□□□ -0.4
DDX39A-202ENST00000324340 FSTL5Q8N475 847 aaPredicted RBP12.56□□□□□ -0.4
DDX39A-202ENST00000324340 PHC3Q8NDX5 983 aa12.56□□□□□ -0.4
DDX39A-202ENST00000324340 GDAP1Q8TB36 358 aa12.56□□□□□ -0.4
DDX39A-202ENST00000324340 RDH11Q8TC12 318 aa12.56□□□□□ -0.4
DDX39A-202ENST00000324340 NRG4Q8WWG1 115 aa12.56□□□□□ -0.4
DDX39A-202ENST00000324340 COX14Q96I36 57 aa12.56□□□□□ -0.4
DDX39A-202ENST00000324340 SLC30A3Q99726 388 aa12.56□□□□□ -0.4
DDX39A-202ENST00000324340 FOXQ1Q9C009 403 aa12.56□□□□□ -0.4
DDX39A-202ENST00000324340 EPHX3Q9H6B9 360 aa12.56□□□□□ -0.4
DDX39A-202ENST00000324340 TBC1D17Q9HA65 648 aa12.56□□□□□ -0.4
DDX39A-202ENST00000324340 EBF1Q9UH73 591 aa12.56□□□□□ -0.4
DDX39A-202ENST00000324340 RUVBL2Q9Y230 463 aaKnown RBP12.56□□□□□ -0.4
DDX39A-202ENST00000324340 UNC80Q8N2C7 3258 aa12.55□□□□□ -0.4
DDX39A-202ENST00000324340 A0A1W2PQU0 124 aa12.55□□□□□ -0.4
DDX39A-202ENST00000324340 IQCF5A8MTL0 148 aa12.55□□□□□ -0.4
DDX39A-202ENST00000324340 E5RI56 91 aa12.55□□□□□ -0.4
DDX39A-202ENST00000324340 G3V2L1 256 aa12.55□□□□□ -0.4
DDX39A-202ENST00000324340 K7ESM1 405 aa12.55□□□□□ -0.4
DDX39A-202ENST00000324340 GYG2O15488 501 aa12.55□□□□□ -0.4
DDX39A-202ENST00000324340 RNGTTO60942 597 aaKnown RBP12.55□□□□□ -0.4
DDX39A-202ENST00000324340 SLC25A14O95258 325 aaPredicted RBP12.55□□□□□ -0.4
DDX39A-202ENST00000324340 TSPAN12O95859 305 aa12.55□□□□□ -0.4
DDX39A-202ENST00000324340 BPGMP07738 259 aa12.55□□□□□ -0.4
DDX39A-202ENST00000324340 OR56A5P0C7T3 313 aa12.55□□□□□ -0.4
DDX39A-202ENST00000324340 CD1DP15813 335 aa12.55□□□□□ -0.4
DDX39A-202ENST00000324340 MSH3P20585 1137 aa12.55□□□□□ -0.4
DDX39A-202ENST00000324340 AKT1P31749 480 aa12.55□□□□□ -0.4
DDX39A-202ENST00000324340 GPR1P46091 355 aa12.55□□□□□ -0.4
DDX39A-202ENST00000324340 ACADVLP49748 655 aa12.55□□□□□ -0.4
DDX39A-202ENST00000324340 AP2B1P63010 937 aa12.55□□□□□ -0.4
DDX39A-202ENST00000324340 SPIDRQ14159 915 aa12.55□□□□□ -0.4
DDX39A-202ENST00000324340 WSCD2Q2TBF2 565 aa12.55□□□□□ -0.4
DDX39A-202ENST00000324340 ACSBG2Q5FVE4 666 aa12.55□□□□□ -0.4
DDX39A-202ENST00000324340 TECRLQ5HYJ1 363 aa12.55□□□□□ -0.4
DDX39A-202ENST00000324340 RAET1GQ6H3X3 334 aa12.55□□□□□ -0.4
DDX39A-202ENST00000324340 GJD3Q8N144 294 aa12.55□□□□□ -0.4
DDX39A-202ENST00000324340 NKAPQ8N5F7 415 aaKnown RBP12.55□□□□□ -0.4
DDX39A-202ENST00000324340 SIDT2Q8NBJ9 832 aaKnown RBP12.55□□□□□ -0.4
DDX39A-202ENST00000324340 TP53I13Q8NBR0 393 aaPredicted RBP12.55□□□□□ -0.4
DDX39A-202ENST00000324340 PJA1Q8NG27 643 aa12.55□□□□□ -0.4
DDX39A-202ENST00000324340 LKAAEAR1Q8TD35 194 aa12.55□□□□□ -0.4
DDX39A-202ENST00000324340 HMGB4Q8WW32 186 aa12.55□□□□□ -0.4
DDX39A-202ENST00000324340 MCUR1Q96AQ8 359 aa12.55□□□□□ -0.4
DDX39A-202ENST00000324340 DCUN1D1Q96GG9 259 aa12.55□□□□□ -0.4
DDX39A-202ENST00000324340 PDLIM5Q96HC4 596 aaKnown RBP12.55□□□□□ -0.4
DDX39A-202ENST00000324340 PANX3Q96QZ0 392 aa12.55□□□□□ -0.4
DDX39A-202ENST00000324340 ECSITQ9BQ95 431 aa12.55□□□□□ -0.4
DDX39A-202ENST00000324340 MRPL57Q9BQC6 102 aaKnown RBP12.55□□□□□ -0.4
DDX39A-202ENST00000324340 SLC17A9Q9BYT1 436 aa12.55□□□□□ -0.4
DDX39A-202ENST00000324340 DERL2Q9GZP9 239 aa12.55□□□□□ -0.4
DDX39A-202ENST00000324340 MRPL46Q9H2W6 279 aaKnown RBP12.55□□□□□ -0.4
DDX39A-202ENST00000324340 CHRDQ9H2X0 955 aa12.55□□□□□ -0.4
DDX39A-202ENST00000324340 SGK2Q9HBY8 427 aa12.55□□□□□ -0.4
DDX39A-202ENST00000324340 C2orf42Q9NWW7 574 aa12.55□□□□□ -0.4
DDX39A-202ENST00000324340 SIRPGQ9P1W8 387 aa12.55□□□□□ -0.4
DDX39A-202ENST00000324340 COPG2Q9UBF2 871 aa12.55□□□□□ -0.4
DDX39A-202ENST00000324340 MBD1Q9UIS9 605 aaPredicted RBP12.55□□□□□ -0.4
DDX39A-202ENST00000324340 TRMT6Q9UJA5 497 aaKnown RBP12.55□□□□□ -0.4
DDX39A-202ENST00000324340 MID2Q9UJV3 735 aa12.55□□□□□ -0.4
DDX39A-202ENST00000324340 TBC1D3DA0A087WVF3 549 aa12.54□□□□□ -0.4
DDX39A-202ENST00000324340 TBC1D3IA0A087WXS9 549 aa12.54□□□□□ -0.4
DDX39A-202ENST00000324340 TBC1D3EA0A087X179 549 aa12.54□□□□□ -0.4
DDX39A-202ENST00000324340 TBC1D3KA0A087X1G2 549 aa12.54□□□□□ -0.4
DDX39A-202ENST00000324340 TBC1D3FA6NER0 549 aaPredicted RBP12.54□□□□□ -0.4
DDX39A-202ENST00000324340 TBC1D3LB9A6J9 549 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms