RNA–Protein interactions for RNA: ENST00000321453.11

PDE1C-201, Transcript of phosphodiesterase 1C, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene PDE1C, Length 2,898 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-201ENST00000321453 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.33■□□□□ 0.21
PDE1C-201ENST00000321453 PGAP2Q9UHJ9 254 aa16.33■□□□□ 0.21
PDE1C-201ENST00000321453 KRT87PA6NCN2 255 aa16.33■□□□□ 0.2
PDE1C-201ENST00000321453 ARVCFO00192 962 aa16.33■□□□□ 0.2
PDE1C-201ENST00000321453 NCAM2O15394 837 aa16.33■□□□□ 0.2
PDE1C-201ENST00000321453 USP17L7P0C7H9 530 aa16.33■□□□□ 0.2
PDE1C-201ENST00000321453 CCDC159P0C7I6 412 aa16.33■□□□□ 0.2
PDE1C-201ENST00000321453 PRSS56P0CW18 603 aa16.33■□□□□ 0.2
PDE1C-201ENST00000321453 MTHFD2P13995 350 aa16.33■□□□□ 0.2
PDE1C-201ENST00000321453 IGFBP5P24593 272 aa16.33■□□□□ 0.2
PDE1C-201ENST00000321453 S100A5P33763 92 aa16.33■□□□□ 0.2
PDE1C-201ENST00000321453 HTR3AP46098 478 aa16.33■□□□□ 0.2
PDE1C-201ENST00000321453 BACE1P56817 501 aa16.33■□□□□ 0.2
PDE1C-201ENST00000321453 MADCAM1Q13477 382 aa16.33■□□□□ 0.2
PDE1C-201ENST00000321453 TBRG1Q3YBR2 411 aa16.33■□□□□ 0.2
PDE1C-201ENST00000321453 TRAF7Q6Q0C0 670 aa16.33■□□□□ 0.2
PDE1C-201ENST00000321453 DLEU7Q6UYE1 221 aa16.33■□□□□ 0.2
PDE1C-201ENST00000321453 IQCF2Q8IXL9 164 aa16.33■□□□□ 0.2
PDE1C-201ENST00000321453 TCAIMQ8N3R3 496 aa16.33■□□□□ 0.2
PDE1C-201ENST00000321453 ATPAF2Q8N5M1 289 aa16.33■□□□□ 0.2
PDE1C-201ENST00000321453 ZNF277Q9NRM2 450 aaPredicted RBP16.33■□□□□ 0.2
PDE1C-201ENST00000321453 SCN3BQ9NY72 215 aa16.33■□□□□ 0.2
PDE1C-201ENST00000321453 WBP11Q9Y2W2 641 aaKnown RBP16.33■□□□□ 0.2
PDE1C-201ENST00000321453 TPRKBQ9Y3C4 175 aa16.33■□□□□ 0.2
PDE1C-201ENST00000321453 BRCA1P38398 1863 aaKnown RBP16.33■□□□□ 0.2
PDE1C-201ENST00000321453 A0A0U1RQS6 177 aa16.32■□□□□ 0.2
PDE1C-201ENST00000321453 MTSS1O43312 755 aa16.32■□□□□ 0.2
PDE1C-201ENST00000321453 APOA1P02647 267 aa16.32■□□□□ 0.2
PDE1C-201ENST00000321453 HOXD8P13378 290 aaPredicted RBP16.32■□□□□ 0.2
PDE1C-201ENST00000321453 GRK5P34947 590 aa16.32■□□□□ 0.2
PDE1C-201ENST00000321453 CYP4F2P78329 520 aa16.32■□□□□ 0.2
PDE1C-201ENST00000321453 CYP4F3Q08477 520 aa16.32■□□□□ 0.2
PDE1C-201ENST00000321453 SLX4IPQ5VYV7 408 aa16.32■□□□□ 0.2
PDE1C-201ENST00000321453 METTL7BQ6UX53 244 aa16.32■□□□□ 0.2
PDE1C-201ENST00000321453 NECAB2Q7Z6G3 386 aa16.32■□□□□ 0.2
PDE1C-201ENST00000321453 NRARPQ7Z6K4 114 aa16.32■□□□□ 0.2
PDE1C-201ENST00000321453 CYP4Z1Q86W10 505 aa16.32■□□□□ 0.2
PDE1C-201ENST00000321453 TTC39CQ8N584 583 aa16.32■□□□□ 0.2
PDE1C-201ENST00000321453 CDYL2Q8N8U2 506 aa16.32■□□□□ 0.2
PDE1C-201ENST00000321453 ZNF583Q96ND8 569 aa16.32■□□□□ 0.2
PDE1C-201ENST00000321453 GPR20Q99678 358 aa16.32■□□□□ 0.2
PDE1C-201ENST00000321453 UGT2B28Q9BY64 529 aa16.32■□□□□ 0.2
PDE1C-201ENST00000321453 RUBCNLQ9H714 662 aa16.32■□□□□ 0.2
PDE1C-201ENST00000321453 RBM22Q9NW64 420 aaKnown RBP eCLIP16.32■□□□□ 0.2
PDE1C-201ENST00000321453 SMPD4Q9NXE4 827 aa16.32■□□□□ 0.2
PDE1C-201ENST00000321453 TBKBP1A7MCY6 615 aa16.32■□□□□ 0.2
PDE1C-201ENST00000321453 HAT1O14929 419 aa16.32■□□□□ 0.2
PDE1C-201ENST00000321453 IFI30P13284 250 aa16.32■□□□□ 0.2
PDE1C-201ENST00000321453 AKAP5P24588 427 aa16.32■□□□□ 0.2
PDE1C-201ENST00000321453 SEMA3BQ13214 749 aa16.32■□□□□ 0.2
PDE1C-201ENST00000321453 GBX1Q14549 363 aa16.32■□□□□ 0.2
PDE1C-201ENST00000321453 SYVN1Q86TM6 617 aa16.32■□□□□ 0.2
PDE1C-201ENST00000321453 ISG20Q96AZ6 181 aaKnown RBP16.32■□□□□ 0.2
PDE1C-201ENST00000321453 REXO5Q96IC2 774 aaKnown RBP16.32■□□□□ 0.2
PDE1C-201ENST00000321453 MRGPRX2Q96LB1 330 aa16.32■□□□□ 0.2
PDE1C-201ENST00000321453 SPATA33Q96N06 139 aa16.32■□□□□ 0.2
PDE1C-201ENST00000321453 KCNS3Q9BQ31 491 aa16.32■□□□□ 0.2
PDE1C-201ENST00000321453 NDFIP2Q9NV92 336 aa16.32■□□□□ 0.2
PDE1C-201ENST00000321453 IKZF3Q9UKT9 509 aa16.32■□□□□ 0.2
PDE1C-201ENST00000321453 FAM50BQ9Y247 325 aa16.32■□□□□ 0.2
PDE1C-201ENST00000321453 PKP3Q9Y446 797 aa16.32■□□□□ 0.2
PDE1C-201ENST00000321453 PCDHGB6Q9Y5F9 930 aa16.32■□□□□ 0.2
PDE1C-201ENST00000321453 GMPPBQ9Y5P6 360 aa16.32■□□□□ 0.2
PDE1C-201ENST00000321453 SAGE2PA6NJ88 616 aa16.32■□□□□ 0.2
PDE1C-201ENST00000321453 DSCR3O14972 297 aa16.32■□□□□ 0.2
PDE1C-201ENST00000321453 AZGP1P25311 298 aaKnown RBP16.32■□□□□ 0.2
PDE1C-201ENST00000321453 ACVR2AP27037 513 aa16.32■□□□□ 0.2
PDE1C-201ENST00000321453 KRT6CP48668 564 aa16.32■□□□□ 0.2
PDE1C-201ENST00000321453 MVKQ03426 396 aa16.32■□□□□ 0.2
PDE1C-201ENST00000321453 GTDC1Q4AE62 458 aa16.32■□□□□ 0.2
PDE1C-201ENST00000321453 COQ5Q5HYK3 327 aa16.32■□□□□ 0.2
PDE1C-201ENST00000321453 BRMS1LQ5PSV4 323 aa16.32■□□□□ 0.2
PDE1C-201ENST00000321453 GJC2Q5T442 439 aaPredicted RBP16.32■□□□□ 0.2
PDE1C-201ENST00000321453 GPRIN1Q7Z2K8 1008 aa16.32■□□□□ 0.2
PDE1C-201ENST00000321453 CILP2Q8IUL8 1156 aa16.32■□□□□ 0.2
PDE1C-201ENST00000321453 CDCA5Q96FF9 252 aa16.32■□□□□ 0.2
PDE1C-201ENST00000321453 EGLN2Q96KS0 407 aa16.32■□□□□ 0.2
PDE1C-201ENST00000321453 FYTTD1Q96QD9 318 aaKnown RBP16.32■□□□□ 0.2
PDE1C-201ENST00000321453 RPRD1BQ9NQG5 326 aaKnown RBP16.32■□□□□ 0.2
PDE1C-201ENST00000321453 A0A096LPI6 279 aa16.31■□□□□ 0.2
PDE1C-201ENST00000321453 DNAJB5O75953 348 aa16.31■□□□□ 0.2
PDE1C-201ENST00000321453 MLYCDO95822 493 aa16.31■□□□□ 0.2
PDE1C-201ENST00000321453 FGF4P08620 206 aa16.31■□□□□ 0.2
PDE1C-201ENST00000321453 G6PDP11413 515 aa16.31■□□□□ 0.2
PDE1C-201ENST00000321453 PRKACBP22694 351 aa16.31■□□□□ 0.2
PDE1C-201ENST00000321453 C21orf33P30042 268 aaPredicted RBP16.31■□□□□ 0.2
PDE1C-201ENST00000321453 KRT20P35900 424 aa16.31■□□□□ 0.2
PDE1C-201ENST00000321453 ZNF544Q6NX49 715 aa16.31■□□□□ 0.2
PDE1C-201ENST00000321453 LINC00299Q6ZSB3 139 aa16.31■□□□□ 0.2
PDE1C-201ENST00000321453 BPHLQ86WA6 291 aaPredicted RBP16.31■□□□□ 0.2
PDE1C-201ENST00000321453 NATD1Q8N6N6 113 aa16.31■□□□□ 0.2
PDE1C-201ENST00000321453 ST6GAL2Q96JF0 529 aa16.31■□□□□ 0.2
PDE1C-201ENST00000321453 VAT1Q99536 393 aa16.31■□□□□ 0.2
PDE1C-201ENST00000321453 WDCPQ9H6R7 721 aa16.31■□□□□ 0.2
PDE1C-201ENST00000321453 CACNG4Q9UBN1 327 aa16.31■□□□□ 0.2
PDE1C-201ENST00000321453 ANXA9O76027 345 aa16.31■□□□□ 0.2
PDE1C-201ENST00000321453 HTR2BP41595 481 aa16.31■□□□□ 0.2
PDE1C-201ENST00000321453 PRKG2Q13237 762 aa16.31■□□□□ 0.2
PDE1C-201ENST00000321453 LRRC8DQ7L1W4 858 aa16.31■□□□□ 0.2
PDE1C-201ENST00000321453 FBXO39Q8N4B4 442 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms