RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 FBXO39Q8N4B4 442 aa15.34■□□□□ 0.05
SHROOM1-201ENST00000319854 DHRSXQ8N5I4 330 aa15.34■□□□□ 0.05
SHROOM1-201ENST00000319854 PACRGLQ8N7B6 248 aa15.34■□□□□ 0.05
SHROOM1-201ENST00000319854 WFDC5Q8TCV5 224 aa15.34■□□□□ 0.05
SHROOM1-201ENST00000319854 SH3YL1Q96HL8 342 aaPredicted RBP15.34■□□□□ 0.05
SHROOM1-201ENST00000319854 AARSD1Q9BTE6 412 aaKnown RBP15.34■□□□□ 0.05
SHROOM1-201ENST00000319854 TAS2R13Q9NYV9 303 aa15.34■□□□□ 0.05
SHROOM1-201ENST00000319854 FNIP2Q9P278 1114 aa15.34■□□□□ 0.05
SHROOM1-201ENST00000319854 NOX1Q9Y5S8 564 aa15.34■□□□□ 0.05
SHROOM1-201ENST00000319854 E5RI56 91 aa15.34■□□□□ 0.05
SHROOM1-201ENST00000319854 KPNA4O00629 521 aaPredicted RBP15.34■□□□□ 0.05
SHROOM1-201ENST00000319854 TOR1BO14657 336 aa15.34■□□□□ 0.05
SHROOM1-201ENST00000319854 SYNCRIPO60506 623 aaKnown RBP15.34■□□□□ 0.05
SHROOM1-201ENST00000319854 ZDHHC11BP0C7U3 371 aa15.34■□□□□ 0.05
SHROOM1-201ENST00000319854 MTHFD2P13995 350 aa15.34■□□□□ 0.05
SHROOM1-201ENST00000319854 HMGA1P17096 107 aaKnown RBP15.34■□□□□ 0.05
SHROOM1-201ENST00000319854 ELAVL2Q12926 359 aaKnown RBP15.34■□□□□ 0.05
SHROOM1-201ENST00000319854 UGT3A1Q6NUS8 523 aa15.34■□□□□ 0.05
SHROOM1-201ENST00000319854 EEF1AKMT1Q8WVE0 214 aa15.34■□□□□ 0.05
SHROOM1-201ENST00000319854 TWIST2Q8WVJ9 160 aa15.34■□□□□ 0.05
SHROOM1-201ENST00000319854 MGME1Q9BQP7 344 aa15.34■□□□□ 0.05
SHROOM1-201ENST00000319854 ASB1Q9Y576 335 aa15.34■□□□□ 0.05
SHROOM1-201ENST00000319854 CASP8AP2Q9UKL3 1982 aa15.34■□□□□ 0.05
SHROOM1-201ENST00000319854 TBC1D4O60343 1298 aa15.34■□□□□ 0.05
SHROOM1-201ENST00000319854 CPNE6O95741 557 aa15.34■□□□□ 0.05
SHROOM1-201ENST00000319854 MTHFD1P11586 935 aaKnown RBP15.34■□□□□ 0.05
SHROOM1-201ENST00000319854 CAPGP40121 348 aa15.34■□□□□ 0.05
SHROOM1-201ENST00000319854 TUFMP49411 452 aaKnown RBP15.34■□□□□ 0.05
SHROOM1-201ENST00000319854 HLCSP50747 726 aa15.34■□□□□ 0.05
SHROOM1-201ENST00000319854 STX1BP61266 288 aa15.34■□□□□ 0.05
SHROOM1-201ENST00000319854 RHOAP61586 193 aa15.34■□□□□ 0.05
SHROOM1-201ENST00000319854 ARF5P84085 180 aa15.34■□□□□ 0.05
SHROOM1-201ENST00000319854 RBBP7Q16576 425 aa15.34■□□□□ 0.05
SHROOM1-201ENST00000319854 INAVAQ3KP66 663 aa15.34■□□□□ 0.05
SHROOM1-201ENST00000319854 ZIK1Q3SY52 487 aaPredicted RBP15.34■□□□□ 0.05
SHROOM1-201ENST00000319854 SPRED1Q7Z699 444 aa15.34■□□□□ 0.05
SHROOM1-201ENST00000319854 NUDT8Q8WV74 236 aa15.34■□□□□ 0.05
SHROOM1-201ENST00000319854 TRIB3Q96RU7 358 aa15.34■□□□□ 0.05
SHROOM1-201ENST00000319854 KLHL25Q9H0H3 589 aa15.34■□□□□ 0.05
SHROOM1-201ENST00000319854 TMEM9Q9P0T7 183 aa15.34■□□□□ 0.05
SHROOM1-201ENST00000319854 MAP10Q9P2G4 905 aa15.34■□□□□ 0.05
SHROOM1-201ENST00000319854 PSME2Q9UL46 239 aa15.34■□□□□ 0.05
SHROOM1-201ENST00000319854 PATJQ8NI35 1801 aa15.33■□□□□ 0.04
SHROOM1-201ENST00000319854 H0Y858 1186 aa15.33■□□□□ 0.04
SHROOM1-201ENST00000319854 NOL3O60936 208 aaKnown RBP15.33■□□□□ 0.04
SHROOM1-201ENST00000319854 CLDN11O75508 207 aa15.33■□□□□ 0.04
SHROOM1-201ENST00000319854 ECI2O75521 394 aa15.33■□□□□ 0.04
SHROOM1-201ENST00000319854 SEC14L2O76054 403 aa15.33■□□□□ 0.04
SHROOM1-201ENST00000319854 RASAL1O95294 804 aa15.33■□□□□ 0.04
SHROOM1-201ENST00000319854 HGFP14210 728 aa15.33■□□□□ 0.04
SHROOM1-201ENST00000319854 FASP25445 335 aa15.33■□□□□ 0.04
SHROOM1-201ENST00000319854 RAD23AP54725 363 aa15.33■□□□□ 0.04
SHROOM1-201ENST00000319854 TMBIM6P55061 237 aa15.33■□□□□ 0.04
SHROOM1-201ENST00000319854 DIO3P55073 304 aa15.33■□□□□ 0.04
SHROOM1-201ENST00000319854 SQLEQ14534 574 aa15.33■□□□□ 0.04
SHROOM1-201ENST00000319854 ADGRF1Q5T601 910 aa15.33■□□□□ 0.04
SHROOM1-201ENST00000319854 FAM151BQ6UXP7 276 aa15.33■□□□□ 0.04
SHROOM1-201ENST00000319854 CLDN19Q8N6F1 224 aa15.33■□□□□ 0.04
SHROOM1-201ENST00000319854 TERB1Q8NA31 727 aa15.33■□□□□ 0.04
SHROOM1-201ENST00000319854 ZNF296Q8WUU4 475 aaPredicted RBP15.33■□□□□ 0.04
SHROOM1-201ENST00000319854 GPR63Q9BZJ6 419 aa15.33■□□□□ 0.04
SHROOM1-201ENST00000319854 SMG9Q9H0W8 520 aaKnown RBP15.33■□□□□ 0.04
SHROOM1-201ENST00000319854 ANKRD66B4E2M5 251 aa15.33■□□□□ 0.04
SHROOM1-201ENST00000319854 GUCA1CO95843 209 aa15.33■□□□□ 0.04
SHROOM1-201ENST00000319854 PIGFQ07326 219 aa15.33■□□□□ 0.04
SHROOM1-201ENST00000319854 CDH18Q13634 790 aa15.33■□□□□ 0.04
SHROOM1-201ENST00000319854 LRRC73Q5JTD7 316 aa15.33■□□□□ 0.04
SHROOM1-201ENST00000319854 GTF2IRD2BQ6EKJ0 949 aa15.33■□□□□ 0.04
SHROOM1-201ENST00000319854 GTF2IRD2Q86UP8 949 aa15.33■□□□□ 0.04
SHROOM1-201ENST00000319854 ADGRG5Q8IZF4 528 aa15.33■□□□□ 0.04
SHROOM1-201ENST00000319854 Q8N9G6 341 aaPredicted RBP15.33■□□□□ 0.04
SHROOM1-201ENST00000319854 CENPNQ96H22 339 aaPredicted RBP15.33■□□□□ 0.04
SHROOM1-201ENST00000319854 MUS81Q96NY9 551 aa15.33■□□□□ 0.04
SHROOM1-201ENST00000319854 C9orf16Q9BUW7 83 aa15.33■□□□□ 0.04
SHROOM1-201ENST00000319854 TNKS2Q9H2K2 1166 aa15.33■□□□□ 0.04
SHROOM1-201ENST00000319854 MEAF6Q9HAF1 191 aa15.33■□□□□ 0.04
SHROOM1-201ENST00000319854 CD274Q9NZQ7 290 aa15.33■□□□□ 0.04
SHROOM1-201ENST00000319854 KLQ9UEF7 1012 aa15.33■□□□□ 0.04
SHROOM1-201ENST00000319854 MED16Q9Y2X0 877 aa15.33■□□□□ 0.04
SHROOM1-201ENST00000319854 AZIN1O14977 448 aa15.32■□□□□ 0.04
SHROOM1-201ENST00000319854 KDELR3O43731 214 aa15.32■□□□□ 0.04
SHROOM1-201ENST00000319854 KATNA1O75449 491 aa15.32■□□□□ 0.04
SHROOM1-201ENST00000319854 TCEA1P23193 301 aaKnown RBP15.32■□□□□ 0.04
SHROOM1-201ENST00000319854 GSSP48637 474 aa15.32■□□□□ 0.04
SHROOM1-201ENST00000319854 ZNF140P52738 457 aaPredicted RBP15.32■□□□□ 0.04
SHROOM1-201ENST00000319854 ZXDBP98169 803 aa15.32■□□□□ 0.04
SHROOM1-201ENST00000319854 SLC43A3Q8NBI5 491 aa15.32■□□□□ 0.04
SHROOM1-201ENST00000319854 VPS33AQ96AX1 596 aa15.32■□□□□ 0.04
SHROOM1-201ENST00000319854 TADA1Q96BN2 335 aa15.32■□□□□ 0.04
SHROOM1-201ENST00000319854 LINGO1Q96FE5 620 aa15.32■□□□□ 0.04
SHROOM1-201ENST00000319854 EHD1Q9H4M9 534 aa15.32■□□□□ 0.04
SHROOM1-201ENST00000319854 LTB4R2Q9NPC1 389 aa15.32■□□□□ 0.04
SHROOM1-201ENST00000319854 SUN2Q9UH99 717 aa15.32■□□□□ 0.04
SHROOM1-201ENST00000319854 YIPF1Q9Y548 306 aa15.32■□□□□ 0.04
SHROOM1-201ENST00000319854 V9GYQ6 96 aa15.32■□□□□ 0.04
SHROOM1-201ENST00000319854 XIRP2A4UGR9 3374 aa15.32■□□□□ 0.04
SHROOM1-201ENST00000319854 DOCK6Q96HP0 2047 aa15.32■□□□□ 0.04
SHROOM1-201ENST00000319854 A0A1B0GVM2 712 aa15.32■□□□□ 0.04
SHROOM1-201ENST00000319854 SMAD6O43541 496 aaKnown RBP15.32■□□□□ 0.04
SHROOM1-201ENST00000319854 HSPA8P11142 646 aaKnown RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms