RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 CCR7P32248 378 aa11.68□□□□□ -0.54
TRIM40-205ENST00000307859 CPA2P48052 419 aa11.68□□□□□ -0.54
TRIM40-205ENST00000307859 KHDC1Q4VXA5 237 aaKnown RBP11.68□□□□□ -0.54
TRIM40-205ENST00000307859 EGFLAMQ63HQ2 1017 aa11.68□□□□□ -0.54
TRIM40-205ENST00000307859 CLEC6AQ6EIG7 209 aa11.68□□□□□ -0.54
TRIM40-205ENST00000307859 FBXL19Q6PCT2 694 aa11.68□□□□□ -0.54
TRIM40-205ENST00000307859 CHSY3Q70JA7 882 aa11.68□□□□□ -0.54
TRIM40-205ENST00000307859 MTSS1LQ765P7 747 aa11.68□□□□□ -0.54
TRIM40-205ENST00000307859 ZNF765Q7L2R6 523 aa11.68□□□□□ -0.54
TRIM40-205ENST00000307859 LONP2Q86WA8 852 aa11.68□□□□□ -0.54
TRIM40-205ENST00000307859 CEP70Q8NHQ1 597 aa11.68□□□□□ -0.54
TRIM40-205ENST00000307859 TRPC4APQ8TEL6 797 aa11.68□□□□□ -0.54
TRIM40-205ENST00000307859 BTN2A2Q8WVV5 523 aa11.68□□□□□ -0.54
TRIM40-205ENST00000307859 CMTM5Q96DZ9 223 aa11.68□□□□□ -0.54
TRIM40-205ENST00000307859 DCUN1D1Q96GG9 259 aa11.68□□□□□ -0.54
TRIM40-205ENST00000307859 MSLNLQ96KJ4 702 aa11.68□□□□□ -0.54
TRIM40-205ENST00000307859 RPP25Q9BUL9 199 aaKnown RBP11.68□□□□□ -0.54
TRIM40-205ENST00000307859 TRMT61BQ9BVS5 477 aaKnown RBP11.68□□□□□ -0.54
TRIM40-205ENST00000307859 MMADHCQ9H3L0 296 aaPredicted RBP11.68□□□□□ -0.54
TRIM40-205ENST00000307859 RDH14Q9HBH5 336 aa11.68□□□□□ -0.54
TRIM40-205ENST00000307859 EIF2B4Q9UI10 523 aaKnown RBP11.68□□□□□ -0.54
TRIM40-205ENST00000307859 MBD1Q9UIS9 605 aaPredicted RBP11.68□□□□□ -0.54
TRIM40-205ENST00000307859 CD207Q9UJ71 328 aa11.68□□□□□ -0.54
TRIM40-205ENST00000307859 ADAMTS6Q9UKP5 1117 aa11.68□□□□□ -0.54
TRIM40-205ENST00000307859 STK38LQ9Y2H1 464 aa11.68□□□□□ -0.54
TRIM40-205ENST00000307859 FIS1Q9Y3D6 152 aa11.68□□□□□ -0.54
TRIM40-205ENST00000307859 TNPO3Q9Y5L0 923 aaKnown RBP11.68□□□□□ -0.54
TRIM40-205ENST00000307859 NUAK1O60285 661 aa11.68□□□□□ -0.54
TRIM40-205ENST00000307859 S100BP04271 92 aaPredicted RBP11.68□□□□□ -0.54
TRIM40-205ENST00000307859 MNAT1P51948 309 aa11.68□□□□□ -0.54
TRIM40-205ENST00000307859 COPAP53621 1224 aa11.68□□□□□ -0.54
TRIM40-205ENST00000307859 CDC16Q13042 620 aa11.68□□□□□ -0.54
TRIM40-205ENST00000307859 ACOX1Q15067 660 aa11.68□□□□□ -0.54
TRIM40-205ENST00000307859 TTC31Q49AM3 519 aaPredicted RBP11.68□□□□□ -0.54
TRIM40-205ENST00000307859 TMEM52BQ4KMG9 183 aa11.68□□□□□ -0.54
TRIM40-205ENST00000307859 DNAL1Q4LDG9 190 aa11.68□□□□□ -0.54
TRIM40-205ENST00000307859 LDLRAP1Q5SW96 308 aa11.68□□□□□ -0.54
TRIM40-205ENST00000307859 PLEKHS1Q5SXH7 462 aa11.68□□□□□ -0.54
TRIM40-205ENST00000307859 TMEM198Q66K66 360 aa11.68□□□□□ -0.54
TRIM40-205ENST00000307859 ERN2Q76MJ5 926 aaKnown RBP11.68□□□□□ -0.54
TRIM40-205ENST00000307859 PACS2Q86VP3 889 aa11.68□□□□□ -0.54
TRIM40-205ENST00000307859 RBM15BQ8NDT2 890 aaKnown RBP11.68□□□□□ -0.54
TRIM40-205ENST00000307859 FBXO27Q8NI29 283 aa11.68□□□□□ -0.54
TRIM40-205ENST00000307859 UBTD2Q8WUN7 234 aa11.68□□□□□ -0.54
TRIM40-205ENST00000307859 GLYATL1Q969I3 302 aa11.68□□□□□ -0.54
TRIM40-205ENST00000307859 AP2M1Q96CW1 435 aa11.68□□□□□ -0.54
TRIM40-205ENST00000307859 C19orf60Q96EN9 201 aa11.68□□□□□ -0.54
TRIM40-205ENST00000307859 ACOX2Q99424 681 aa11.68□□□□□ -0.54
TRIM40-205ENST00000307859 WRAP53Q9BUR4 548 aaKnown RBP11.68□□□□□ -0.54
TRIM40-205ENST00000307859 HDAC8Q9BY41 377 aa11.68□□□□□ -0.54
TRIM40-205ENST00000307859 SEMA4BQ9NPR2 832 aaPredicted RBP11.68□□□□□ -0.54
TRIM40-205ENST00000307859 MRGBPQ9NV56 204 aa11.68□□□□□ -0.54
TRIM40-205ENST00000307859 UTP6Q9NYH9 597 aaKnown RBP11.68□□□□□ -0.54
TRIM40-205ENST00000307859 EPS15L1Q9UBC2 864 aa11.68□□□□□ -0.54
TRIM40-205ENST00000307859 PTBP2Q9UKA9 531 aaKnown RBP11.68□□□□□ -0.54
TRIM40-205ENST00000307859 ASB1Q9Y576 335 aa11.68□□□□□ -0.54
TRIM40-205ENST00000307859 DNAJC15Q9Y5T4 150 aa11.68□□□□□ -0.54
TRIM40-205ENST00000307859 A0A1B0GTL3 188 aa11.67□□□□□ -0.54
TRIM40-205ENST00000307859 MED19A0JLT2 244 aaPredicted RBP11.67□□□□□ -0.54
TRIM40-205ENST00000307859 ANTXRLA6NF34 631 aa11.67□□□□□ -0.54
TRIM40-205ENST00000307859 QSOX1O00391 747 aa11.67□□□□□ -0.54
TRIM40-205ENST00000307859 KPNA5O15131 536 aa11.67□□□□□ -0.54
TRIM40-205ENST00000307859 ESRRBO95718 433 aa11.67□□□□□ -0.54
TRIM40-205ENST00000307859 SOD1P00441 154 aa11.67□□□□□ -0.54
TRIM40-205ENST00000307859 FTH1P02794 183 aa11.67□□□□□ -0.54
TRIM40-205ENST00000307859 EPHX1P07099 455 aa11.67□□□□□ -0.54
TRIM40-205ENST00000307859 MPC1LP0DKB6 136 aa11.67□□□□□ -0.54
TRIM40-205ENST00000307859 VCLP18206 1134 aa11.67□□□□□ -0.54
TRIM40-205ENST00000307859 MSH3P20585 1137 aa11.67□□□□□ -0.54
TRIM40-205ENST00000307859 PIK3R1P27986 724 aa11.67□□□□□ -0.54
TRIM40-205ENST00000307859 CPOXP36551 454 aa11.67□□□□□ -0.54
TRIM40-205ENST00000307859 FOXA1P55317 472 aa11.67□□□□□ -0.54
TRIM40-205ENST00000307859 HERC3Q15034 1050 aa11.67□□□□□ -0.54
TRIM40-205ENST00000307859 PHKG1Q16816 387 aa11.67□□□□□ -0.54
TRIM40-205ENST00000307859 FBXO48Q5FWF7 155 aa11.67□□□□□ -0.54
TRIM40-205ENST00000307859 CDKL4Q5MAI5 379 aa11.67□□□□□ -0.54
TRIM40-205ENST00000307859 NXNQ6DKJ4 435 aa11.67□□□□□ -0.54
TRIM40-205ENST00000307859 METTL2BQ6P1Q9 378 aaKnown RBP11.67□□□□□ -0.54
TRIM40-205ENST00000307859 NUDT18Q6ZVK8 323 aa11.67□□□□□ -0.54
TRIM40-205ENST00000307859 NEK10Q6ZWH5 1172 aa11.67□□□□□ -0.54
TRIM40-205ENST00000307859 LARP4Q71RC2 724 aaKnown RBP eCLIP11.67□□□□□ -0.54
TRIM40-205ENST00000307859 DET1Q7L5Y6 550 aa11.67□□□□□ -0.54
TRIM40-205ENST00000307859 PARP9Q8IXQ6 854 aa11.67□□□□□ -0.54
TRIM40-205ENST00000307859 FAM13CQ8NE31 585 aa11.67□□□□□ -0.54
TRIM40-205ENST00000307859 OR56A4Q8NGH8 313 aa11.67□□□□□ -0.54
TRIM40-205ENST00000307859 TWIST2Q8WVJ9 160 aa11.67□□□□□ -0.54
TRIM40-205ENST00000307859 DLG3Q92796 817 aa11.67□□□□□ -0.54
TRIM40-205ENST00000307859 RAB7BQ96AH8 199 aa11.67□□□□□ -0.54
TRIM40-205ENST00000307859 CATSPER2Q96P56 530 aa11.67□□□□□ -0.54
TRIM40-205ENST00000307859 ZNF382Q96SR6 550 aa11.67□□□□□ -0.54
TRIM40-205ENST00000307859 HGH1Q9BTY7 390 aa11.67□□□□□ -0.54
TRIM40-205ENST00000307859 NUSAP1Q9BXS6 441 aaKnown RBP11.67□□□□□ -0.54
TRIM40-205ENST00000307859 DYRK4Q9NR20 520 aa11.67□□□□□ -0.54
TRIM40-205ENST00000307859 CACNA2D2Q9NY47 1150 aa11.67□□□□□ -0.54
TRIM40-205ENST00000307859 TSR3Q9UJK0 312 aaKnown RBP11.67□□□□□ -0.54
TRIM40-205ENST00000307859 STON1Q9Y6Q2 735 aa11.67□□□□□ -0.54
TRIM40-205ENST00000307859 NUMA1Q14980 2115 aa11.66□□□□□ -0.54
TRIM40-205ENST00000307859 A8MUI8 341 aa11.66□□□□□ -0.54
TRIM40-205ENST00000307859 ANHXE9PGG2 379 aa11.66□□□□□ -0.54
TRIM40-205ENST00000307859 PLK4O00444 970 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms