RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 ABRAXAS1Q6UWZ7 409 aa8.23□□□□□ -1.09
PCDHB1-201ENST00000306549 DCP2Q8IU60 420 aaKnown RBP8.23□□□□□ -1.09
PCDHB1-201ENST00000306549 KIF2BQ8N4N8 673 aa8.23□□□□□ -1.09
PCDHB1-201ENST00000306549 DCAF4L2Q8NA75 395 aa8.23□□□□□ -1.09
PCDHB1-201ENST00000306549 ADCY4Q8NFM4 1077 aa8.23□□□□□ -1.09
PCDHB1-201ENST00000306549 PSMA8Q8TAA3 256 aa8.23□□□□□ -1.09
PCDHB1-201ENST00000306549 RASSF5Q8WWW0 418 aa8.23□□□□□ -1.09
PCDHB1-201ENST00000306549 TLR10Q9BXR5 811 aa8.23□□□□□ -1.09
PCDHB1-201ENST00000306549 SLC32A1Q9H598 525 aa8.23□□□□□ -1.09
PCDHB1-201ENST00000306549 GPN1Q9HCN4 374 aaPredicted RBP8.23□□□□□ -1.09
PCDHB1-201ENST00000306549 CD207Q9UJ71 328 aa8.23□□□□□ -1.09
PCDHB1-201ENST00000306549 IKZF3Q9UKT9 509 aa8.23□□□□□ -1.09
PCDHB1-201ENST00000306549 LRP5O75197 1615 aa8.23□□□□□ -1.09
PCDHB1-201ENST00000306549 MBLAC1A4D2B0 266 aaPredicted RBP8.23□□□□□ -1.09
PCDHB1-201ENST00000306549 CCDC182A6NF36 153 aa8.23□□□□□ -1.09
PCDHB1-201ENST00000306549 TSPAN6O43657 245 aa8.23□□□□□ -1.09
PCDHB1-201ENST00000306549 GALTP07902 379 aa8.23□□□□□ -1.09
PCDHB1-201ENST00000306549 PPP3R1P63098 170 aa8.23□□□□□ -1.09
PCDHB1-201ENST00000306549 REXO1L1PQ8IX06 675 aa8.23□□□□□ -1.09
PCDHB1-201ENST00000306549 AZIN2Q96A70 460 aa8.23□□□□□ -1.09
PCDHB1-201ENST00000306549 FETUBQ9UGM5 382 aa8.23□□□□□ -1.09
PCDHB1-201ENST00000306549 COG5Q9UP83 839 aa8.23□□□□□ -1.09
PCDHB1-201ENST00000306549 MYRFQ9Y2G1 1151 aa8.23□□□□□ -1.09
PCDHB1-201ENST00000306549 MRPS7Q9Y2R9 242 aaKnown RBP8.23□□□□□ -1.09
PCDHB1-201ENST00000306549 LOC110117498-PIK3R3F6TDL0 507 aa8.23□□□□□ -1.09
PCDHB1-201ENST00000306549 H0YGN5 161 aa8.23□□□□□ -1.09
PCDHB1-201ENST00000306549 OR10H3O60404 316 aa8.23□□□□□ -1.09
PCDHB1-201ENST00000306549 NTRK1P04629 796 aa8.23□□□□□ -1.09
PCDHB1-201ENST00000306549 HOXB2P14652 356 aa8.23□□□□□ -1.09
PCDHB1-201ENST00000306549 PTPRNQ16849 979 aa8.23□□□□□ -1.09
PCDHB1-201ENST00000306549 VPS26BQ4G0F5 336 aa8.23□□□□□ -1.09
PCDHB1-201ENST00000306549 KLHDC10Q6PID8 442 aa8.23□□□□□ -1.09
PCDHB1-201ENST00000306549 KBTBD8Q8NFY9 601 aa8.23□□□□□ -1.09
PCDHB1-201ENST00000306549 ADAMTS15Q8TE58 950 aa8.23□□□□□ -1.09
PCDHB1-201ENST00000306549 ACOT12Q8WYK0 555 aa8.23□□□□□ -1.09
PCDHB1-201ENST00000306549 PIK3R3Q92569 461 aa8.23□□□□□ -1.09
PCDHB1-201ENST00000306549 ERLEC1Q96DZ1 483 aa8.23□□□□□ -1.09
PCDHB1-201ENST00000306549 ING4Q9UNL4 249 aa8.23□□□□□ -1.09
PCDHB1-201ENST00000306549 PEX12O00623 359 aa8.23□□□□□ -1.09
PCDHB1-201ENST00000306549 CDC40O60508 579 aaKnown RBP eCLIP8.23□□□□□ -1.09
PCDHB1-201ENST00000306549 FOXD2O60548 495 aaPredicted RBP8.23□□□□□ -1.09
PCDHB1-201ENST00000306549 CLEC3AO75596 197 aa8.23□□□□□ -1.09
PCDHB1-201ENST00000306549 CHRNA1P02708 482 aa8.23□□□□□ -1.09
PCDHB1-201ENST00000306549 CTSAP10619 480 aa8.23□□□□□ -1.09
PCDHB1-201ENST00000306549 MKRN4PQ13434 485 aaPredicted RBP8.23□□□□□ -1.09
PCDHB1-201ENST00000306549 RAB33AQ14088 237 aa8.23□□□□□ -1.09
PCDHB1-201ENST00000306549 CARD16Q5EG05 197 aa8.23□□□□□ -1.09
PCDHB1-201ENST00000306549 TMPRSS11AQ6ZMR5 421 aa8.23□□□□□ -1.09
PCDHB1-201ENST00000306549 DCAKDQ8WVC6 231 aa8.23□□□□□ -1.09
PCDHB1-201ENST00000306549 SMARCD2Q92925 531 aa8.23□□□□□ -1.09
PCDHB1-201ENST00000306549 DHRS1Q96LJ7 313 aa8.23□□□□□ -1.09
PCDHB1-201ENST00000306549 ANKRD27Q96NW4 1050 aa8.23□□□□□ -1.09
PCDHB1-201ENST00000306549 LACRTQ9GZZ8 138 aa8.23□□□□□ -1.09
PCDHB1-201ENST00000306549 EHD3Q9NZN3 535 aa8.23□□□□□ -1.09
PCDHB1-201ENST00000306549 IGKV6D-21A0A0A0MT36 114 aa8.23□□□□□ -1.09
PCDHB1-201ENST00000306549 A0A1W2PRU2 124 aa8.23□□□□□ -1.09
PCDHB1-201ENST00000306549 TTKP33981 857 aa8.23□□□□□ -1.09
PCDHB1-201ENST00000306549 NAA30Q147X3 362 aaPredicted RBP8.23□□□□□ -1.09
PCDHB1-201ENST00000306549 PLEKHG4Q58EX7 1191 aa8.23□□□□□ -1.09
PCDHB1-201ENST00000306549 APTXQ7Z2E3 356 aaKnown RBP8.23□□□□□ -1.09
PCDHB1-201ENST00000306549 MRPL10Q7Z7H8 261 aaKnown RBP8.23□□□□□ -1.09
PCDHB1-201ENST00000306549 TDRPQ86YL5 185 aa8.23□□□□□ -1.09
PCDHB1-201ENST00000306549 PPCDCQ96CD2 204 aa8.23□□□□□ -1.09
PCDHB1-201ENST00000306549 P2RY11Q96G91 374 aa8.23□□□□□ -1.09
PCDHB1-201ENST00000306549 CRISPLD1Q9H336 500 aa8.23□□□□□ -1.09
PCDHB1-201ENST00000306549 GGA2Q9UJY4 613 aa8.23□□□□□ -1.09
PCDHB1-201ENST00000306549 PTGES3LE9PB15 166 aa8.22□□□□□ -1.09
PCDHB1-201ENST00000306549 G3V2T6 193 aa8.22□□□□□ -1.09
PCDHB1-201ENST00000306549 CHST10O43529 356 aa8.22□□□□□ -1.09
PCDHB1-201ENST00000306549 AKAP8O43823 692 aaKnown RBP8.22□□□□□ -1.09
PCDHB1-201ENST00000306549 SNAP91O60641 907 aa8.22□□□□□ -1.09
PCDHB1-201ENST00000306549 DNAJA2O60884 412 aa8.22□□□□□ -1.09
PCDHB1-201ENST00000306549 SERPINA3P01011 423 aa8.22□□□□□ -1.09
PCDHB1-201ENST00000306549 NR2F6P10588 404 aa8.22□□□□□ -1.09
PCDHB1-201ENST00000306549 TPH1P17752 444 aa8.22□□□□□ -1.09
PCDHB1-201ENST00000306549 CDH3P22223 829 aa8.22□□□□□ -1.09
PCDHB1-201ENST00000306549 SCRN3Q0VDG4 424 aa8.22□□□□□ -1.09
PCDHB1-201ENST00000306549 TUBB3Q13509 450 aa8.22□□□□□ -1.09
PCDHB1-201ENST00000306549 RAPSNQ13702 412 aa8.22□□□□□ -1.09
PCDHB1-201ENST00000306549 MAPK14Q16539 360 aa8.22□□□□□ -1.09
PCDHB1-201ENST00000306549 PFKFB4Q16877 469 aa8.22□□□□□ -1.09
PCDHB1-201ENST00000306549 SOWAHAQ2M3V2 549 aa8.22□□□□□ -1.09
PCDHB1-201ENST00000306549 POM121L1PQ3SYA9 428 aa8.22□□□□□ -1.09
PCDHB1-201ENST00000306549 PIK3C3Q8NEB9 887 aa8.22□□□□□ -1.09
PCDHB1-201ENST00000306549 BADQ92934 168 aa8.22□□□□□ -1.09
PCDHB1-201ENST00000306549 NSMCE3Q96MG7 304 aa8.22□□□□□ -1.09
PCDHB1-201ENST00000306549 KREMEN1Q96MU8 473 aa8.22□□□□□ -1.09
PCDHB1-201ENST00000306549 P2RY13Q9BPV8 354 aa8.22□□□□□ -1.09
PCDHB1-201ENST00000306549 C1orf50Q9BV19 199 aa8.22□□□□□ -1.09
PCDHB1-201ENST00000306549 MIOSQ9NXC5 875 aa8.22□□□□□ -1.09
PCDHB1-201ENST00000306549 TOR4AQ9NXH8 423 aa8.22□□□□□ -1.09
PCDHB1-201ENST00000306549 LEF1Q9UJU2 399 aaPredicted RBP8.22□□□□□ -1.09
PCDHB1-201ENST00000306549 LRRC37AA6NMS7 1700 aa8.22□□□□□ -1.09
PCDHB1-201ENST00000306549 ANKRD65E5RJM6 399 aa8.22□□□□□ -1.09
PCDHB1-201ENST00000306549 UGT2B17O75795 530 aa8.22□□□□□ -1.09
PCDHB1-201ENST00000306549 LRIG2O94898 1065 aa8.22□□□□□ -1.09
PCDHB1-201ENST00000306549 OAZ2O95190 189 aa8.22□□□□□ -1.09
PCDHB1-201ENST00000306549 RPL7AP62424 266 aaKnown RBP8.22□□□□□ -1.09
PCDHB1-201ENST00000306549 PRR23BQ6ZRT6 265 aa8.22□□□□□ -1.09
PCDHB1-201ENST00000306549 SLC30A8Q8IWU4 369 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms