RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 OLFML1Q6UWY5 402 aa15.73■□□□□ 0.11
USP42-201ENST00000306177 PSMA8Q8TAA3 256 aa15.73■□□□□ 0.11
USP42-201ENST00000306177 TRIM63Q969Q1 353 aa15.73■□□□□ 0.11
USP42-201ENST00000306177 DGCR14Q96DF8 476 aaKnown RBP15.73■□□□□ 0.11
USP42-201ENST00000306177 SUCOQ9UBS9 1254 aaKnown RBP15.73■□□□□ 0.11
USP42-201ENST00000306177 SH3GLB1Q9Y371 365 aa15.73■□□□□ 0.11
USP42-201ENST00000306177 YIPF1Q9Y548 306 aa15.73■□□□□ 0.11
USP42-201ENST00000306177 TRBV23OR9-2A0A075B6M9 112 aa15.73■□□□□ 0.11
USP42-201ENST00000306177 TCRBV7S3A2A0A539 114 aa15.73■□□□□ 0.11
USP42-201ENST00000306177 WWP2O00308 870 aa15.73■□□□□ 0.11
USP42-201ENST00000306177 FFAR2O15552 330 aa15.73■□□□□ 0.11
USP42-201ENST00000306177 OR1F1O43749 312 aa15.73■□□□□ 0.11
USP42-201ENST00000306177 TMCC2O75069 709 aa15.73■□□□□ 0.11
USP42-201ENST00000306177 THRBP10828 461 aa15.73■□□□□ 0.11
USP42-201ENST00000306177 SRP54P61011 504 aaKnown RBP15.73■□□□□ 0.11
USP42-201ENST00000306177 TLE2Q04725 743 aa15.73■□□□□ 0.11
USP42-201ENST00000306177 OR13C4Q8NGS5 318 aa15.73■□□□□ 0.11
USP42-201ENST00000306177 C7orf43Q8WVR3 580 aa15.73■□□□□ 0.11
USP42-201ENST00000306177 CADM1Q9BY67 442 aaKnown RBP15.73■□□□□ 0.11
USP42-201ENST00000306177 AHCYL1O43865 530 aa15.72■□□□□ 0.11
USP42-201ENST00000306177 ECDO95905 644 aaPredicted RBP15.72■□□□□ 0.11
USP42-201ENST00000306177 CHRNGP07510 517 aa15.72■□□□□ 0.11
USP42-201ENST00000306177 SLC35G6P0C7Q6 338 aa15.72■□□□□ 0.11
USP42-201ENST00000306177 GNAZP19086 355 aa15.72■□□□□ 0.11
USP42-201ENST00000306177 SLC25A11Q02978 314 aaKnown RBP15.72■□□□□ 0.11
USP42-201ENST00000306177 SIM2Q14190 667 aaPredicted RBP15.72■□□□□ 0.11
USP42-201ENST00000306177 SNAP47Q5SQN1 464 aa15.72■□□□□ 0.11
USP42-201ENST00000306177 FAM171BQ6P995 826 aa15.72■□□□□ 0.11
USP42-201ENST00000306177 KRT74Q7RTS7 529 aa15.72■□□□□ 0.11
USP42-201ENST00000306177 SLC34A3Q8N130 599 aa15.72■□□□□ 0.11
USP42-201ENST00000306177 RASSF5Q8WWW0 418 aa15.72■□□□□ 0.11
USP42-201ENST00000306177 OSBPL7Q9BZF2 842 aa15.72■□□□□ 0.11
USP42-201ENST00000306177 TMEM27Q9HBJ8 222 aa15.72■□□□□ 0.11
USP42-201ENST00000306177 MAGEB17A8MXT2 336 aa15.72■□□□□ 0.11
USP42-201ENST00000306177 RPS9P46781 194 aaKnown RBP15.72■□□□□ 0.11
USP42-201ENST00000306177 IRF9Q00978 393 aa15.72■□□□□ 0.11
USP42-201ENST00000306177 TMEM63BQ5T3F8 832 aa15.72■□□□□ 0.11
USP42-201ENST00000306177 POC5Q8NA72 575 aa15.72■□□□□ 0.11
USP42-201ENST00000306177 SH3RF2Q8TEC5 729 aa15.72■□□□□ 0.11
USP42-201ENST00000306177 DCAKDQ8WVC6 231 aa15.72■□□□□ 0.11
USP42-201ENST00000306177 LCN9Q8WX39 176 aa15.72■□□□□ 0.11
USP42-201ENST00000306177 HERVK_113Q902F9 699 aa15.72■□□□□ 0.11
USP42-201ENST00000306177 EBPLQ9BY08 206 aa15.72■□□□□ 0.11
USP42-201ENST00000306177 GPN3Q9UHW5 284 aaPredicted RBP15.72■□□□□ 0.11
USP42-201ENST00000306177 RUVBL1Q9Y265 456 aaKnown RBP15.72■□□□□ 0.11
USP42-201ENST00000306177 ACRP10323 421 aa15.72■□□□□ 0.11
USP42-201ENST00000306177 NT5EP21589 574 aa15.72■□□□□ 0.11
USP42-201ENST00000306177 KCNJ11Q14654 390 aa15.72■□□□□ 0.11
USP42-201ENST00000306177 HEPACAMQ14CZ8 416 aa15.72■□□□□ 0.11
USP42-201ENST00000306177 PYDC2Q56P42 97 aa15.72■□□□□ 0.11
USP42-201ENST00000306177 C7orf61Q8IZ16 206 aa15.72■□□□□ 0.11
USP42-201ENST00000306177 SLC9A6Q92581 669 aa15.72■□□□□ 0.11
USP42-201ENST00000306177 PPIEQ9UNP9 301 aaKnown RBP15.72■□□□□ 0.11
USP42-201ENST00000306177 FADS2P1A8MWK0 482 aa15.72■□□□□ 0.11
USP42-201ENST00000306177 DNM1LO00429 736 aa15.72■□□□□ 0.11
USP42-201ENST00000306177 TOP3BO95985 862 aaKnown RBP15.72■□□□□ 0.11
USP42-201ENST00000306177 RPS14P62263 151 aaKnown RBP15.72■□□□□ 0.11
USP42-201ENST00000306177 HERVK_113P63132 956 aa15.72■□□□□ 0.11
USP42-201ENST00000306177 SRSF11Q05519 484 aaKnown RBP15.72■□□□□ 0.11
USP42-201ENST00000306177 SLC10A7Q0GE19 358 aa15.72■□□□□ 0.11
USP42-201ENST00000306177 FAAH2Q6GMR7 532 aa15.72■□□□□ 0.11
USP42-201ENST00000306177 ESAMQ96AP7 390 aa15.72■□□□□ 0.11
USP42-201ENST00000306177 PRICKLE1Q96MT3 831 aaPredicted RBP15.72■□□□□ 0.11
USP42-201ENST00000306177 ERVK-6Q9BXR3 956 aa15.72■□□□□ 0.11
USP42-201ENST00000306177 CERS4Q9HA82 394 aa15.72■□□□□ 0.11
USP42-201ENST00000306177 ZBTB11O95625 1053 aaPredicted RBP15.71■□□□□ 0.11
USP42-201ENST00000306177 LAMP2P13473 410 aa15.71■□□□□ 0.11
USP42-201ENST00000306177 FOXN2P32314 431 aa15.71■□□□□ 0.11
USP42-201ENST00000306177 CCNFP41002 786 aa15.71■□□□□ 0.11
USP42-201ENST00000306177 ZBTB6Q15916 424 aa15.71■□□□□ 0.11
USP42-201ENST00000306177 VITQ6UXI7 678 aa15.71■□□□□ 0.11
USP42-201ENST00000306177 BEND5Q7L4P6 421 aa15.71■□□□□ 0.11
USP42-201ENST00000306177 SLC13A3Q8WWT9 602 aa15.71■□□□□ 0.11
USP42-201ENST00000306177 RIPOR3Q96MK2 946 aa15.71■□□□□ 0.11
USP42-201ENST00000306177 GPR88Q9GZN0 384 aa15.71■□□□□ 0.11
USP42-201ENST00000306177 OXSMQ9NWU1 459 aa15.71■□□□□ 0.11
USP42-201ENST00000306177 MTRRQ9UBK8 725 aa15.71■□□□□ 0.11
USP42-201ENST00000306177 STYXL1Q9Y6J8 313 aa15.71■□□□□ 0.11
USP42-201ENST00000306177 K7EPI3 171 aa15.71■□□□□ 0.11
USP42-201ENST00000306177 HAT1O14929 419 aa15.71■□□□□ 0.11
USP42-201ENST00000306177 KRT33AO76009 404 aa15.71■□□□□ 0.11
USP42-201ENST00000306177 SNAI1O95863 264 aaPredicted RBP15.71■□□□□ 0.11
USP42-201ENST00000306177 FADS2O95864 444 aaKnown RBP15.71■□□□□ 0.11
USP42-201ENST00000306177 COL6A1P12109 1028 aa15.71■□□□□ 0.11
USP42-201ENST00000306177 IMPDH1P20839 514 aa15.71■□□□□ 0.11
USP42-201ENST00000306177 GRIA1P42261 906 aa15.71■□□□□ 0.11
USP42-201ENST00000306177 MYBPC1Q00872 1141 aa15.71■□□□□ 0.11
USP42-201ENST00000306177 PERM1Q5SV97 790 aa15.71■□□□□ 0.11
USP42-201ENST00000306177 DENND5AQ6IQ26 1287 aa15.71■□□□□ 0.11
USP42-201ENST00000306177 TAF8Q7Z7C8 310 aa15.71■□□□□ 0.11
USP42-201ENST00000306177 GJD3Q8N144 294 aa15.71■□□□□ 0.11
USP42-201ENST00000306177 DNASE1L2Q92874 299 aa15.71■□□□□ 0.11
USP42-201ENST00000306177 SMOC2Q9H3U7 446 aa15.71■□□□□ 0.11
USP42-201ENST00000306177 RASSF1Q9NS23 344 aa15.71■□□□□ 0.11
USP42-201ENST00000306177 OSER1Q9NX31 292 aa15.71■□□□□ 0.11
USP42-201ENST00000306177 A0A1W2PRU2 124 aa15.71■□□□□ 0.11
USP42-201ENST00000306177 FAM149AA5PLN7 773 aa15.71■□□□□ 0.11
USP42-201ENST00000306177 ADAMDEC1O15204 470 aa15.71■□□□□ 0.11
USP42-201ENST00000306177 ZNF846Q147U1 533 aa15.71■□□□□ 0.11
USP42-201ENST00000306177 RALGPS1Q5JS13 557 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms