RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 TRPM4Q8TD43 1214 aa13.24□□□□□ -0.29
TRIM56-201ENST00000306085 GTPBP2Q9BX10 602 aaKnown RBP13.24□□□□□ -0.29
TRIM56-201ENST00000306085 C2orf92A0A1B0GVN3 265 aa13.24□□□□□ -0.29
TRIM56-201ENST00000306085 BBIP1A8MTZ0 92 aa13.24□□□□□ -0.29
TRIM56-201ENST00000306085 A8MVJ9 347 aa13.24□□□□□ -0.29
TRIM56-201ENST00000306085 SULT1B1O43704 296 aa13.24□□□□□ -0.29
TRIM56-201ENST00000306085 ASLP04424 464 aa13.24□□□□□ -0.29
TRIM56-201ENST00000306085 IL1R1P14778 569 aa13.24□□□□□ -0.29
TRIM56-201ENST00000306085 HSD17B12Q53GQ0 312 aa13.24□□□□□ -0.29
TRIM56-201ENST00000306085 SNX29P2Q8IUI4 249 aa13.24□□□□□ -0.29
TRIM56-201ENST00000306085 CBR4Q8N4T8 237 aa13.24□□□□□ -0.29
TRIM56-201ENST00000306085 CLP1Q92989 425 aaKnown RBP13.24□□□□□ -0.29
TRIM56-201ENST00000306085 L2HGDHQ9H9P8 463 aa13.24□□□□□ -0.29
TRIM56-201ENST00000306085 SEC16AO15027 2179 aa13.24□□□□□ -0.29
TRIM56-201ENST00000306085 ACADVLP49748 655 aa13.24□□□□□ -0.29
TRIM56-201ENST00000306085 ZSCAN1Q8NBB4 408 aa13.24□□□□□ -0.29
TRIM56-201ENST00000306085 FDXACB1Q9BRP7 624 aaPredicted RBP13.24□□□□□ -0.29
TRIM56-201ENST00000306085 SNX15Q9NRS6 342 aa13.24□□□□□ -0.29
TRIM56-201ENST00000306085 ELOVL2Q9NXB9 296 aa13.24□□□□□ -0.29
TRIM56-201ENST00000306085 CDH13P55290 713 aa13.24□□□□□ -0.29
TRIM56-201ENST00000306085 TIGD6Q17RP2 521 aa13.24□□□□□ -0.29
TRIM56-201ENST00000306085 ZNF311Q5JNZ3 666 aa13.24□□□□□ -0.29
TRIM56-201ENST00000306085 CLEC12AQ5QGZ9 265 aa13.24□□□□□ -0.29
TRIM56-201ENST00000306085 OR8S1Q8NH09 359 aa13.24□□□□□ -0.29
TRIM56-201ENST00000306085 APOLD1Q96LR9 279 aa13.24□□□□□ -0.29
TRIM56-201ENST00000306085 CDH22Q9UJ99 828 aa13.24□□□□□ -0.29
TRIM56-201ENST00000306085 CSTBP04080 98 aaKnown RBP13.24□□□□□ -0.29
TRIM56-201ENST00000306085 SLC6A4P31645 630 aa13.24□□□□□ -0.29
TRIM56-201ENST00000306085 KIR3DL1P43629 444 aa13.24□□□□□ -0.29
TRIM56-201ENST00000306085 CXCR3P49682 368 aa13.24□□□□□ -0.29
TRIM56-201ENST00000306085 MAB21L1Q13394 359 aa13.24□□□□□ -0.29
TRIM56-201ENST00000306085 PEX6Q13608 980 aa13.24□□□□□ -0.29
TRIM56-201ENST00000306085 CPSF7Q8N684 471 aaKnown RBP13.24□□□□□ -0.29
TRIM56-201ENST00000306085 DNAJB3Q8WWF6 145 aa13.24□□□□□ -0.29
TRIM56-201ENST00000306085 FAM84BQ96KN1 310 aaPredicted RBP13.24□□□□□ -0.29
TRIM56-201ENST00000306085 BRF2Q9HAW0 419 aa13.24□□□□□ -0.29
TRIM56-201ENST00000306085 ZNF175Q9Y473 711 aa13.24□□□□□ -0.29
TRIM56-201ENST00000306085 PRKAR1BP31321 381 aa13.24□□□□□ -0.29
TRIM56-201ENST00000306085 LRRC37A5PQ49AS3 106 aa13.24□□□□□ -0.29
TRIM56-201ENST00000306085 STK35Q8TDR2 534 aa13.24□□□□□ -0.29
TRIM56-201ENST00000306085 TTYH2Q9BSA4 534 aa13.24□□□□□ -0.29
TRIM56-201ENST00000306085 EBPLQ9BY08 206 aa13.24□□□□□ -0.29
TRIM56-201ENST00000306085 ACSS2Q9NR19 701 aa13.24□□□□□ -0.29
TRIM56-201ENST00000306085 NOBOXO60393 691 aa13.24□□□□□ -0.29
TRIM56-201ENST00000306085 AKAP3O75969 853 aa13.24□□□□□ -0.29
TRIM56-201ENST00000306085 SFTPBP07988 381 aa13.24□□□□□ -0.29
TRIM56-201ENST00000306085 GLRA2P23416 452 aa13.24□□□□□ -0.29
TRIM56-201ENST00000306085 ZNF598Q86UK7 904 aaKnown RBP13.24□□□□□ -0.29
TRIM56-201ENST00000306085 LRRN4Q8WUT4 740 aa13.24□□□□□ -0.29
TRIM56-201ENST00000306085 CDT1Q9H211 546 aa13.24□□□□□ -0.29
TRIM56-201ENST00000306085 H0YJX3 145 aa13.23□□□□□ -0.29
TRIM56-201ENST00000306085 RPP14O95059 124 aaKnown RBP13.23□□□□□ -0.29
TRIM56-201ENST00000306085 DUSP4Q13115 394 aa13.23□□□□□ -0.29
TRIM56-201ENST00000306085 LRP8Q14114 963 aa13.23□□□□□ -0.29
TRIM56-201ENST00000306085 PDK4Q16654 411 aa13.23□□□□□ -0.29
TRIM56-201ENST00000306085 ODF4Q2M2E3 257 aa13.23□□□□□ -0.29
TRIM56-201ENST00000306085 PLEKHG4Q58EX7 1191 aa13.23□□□□□ -0.29
TRIM56-201ENST00000306085 ZNF676Q8N7Q3 588 aa13.23□□□□□ -0.29
TRIM56-201ENST00000306085 ZNF606Q8WXB4 792 aa13.23□□□□□ -0.29
TRIM56-201ENST00000306085 CDK12Q9NYV4 1490 aaPredicted RBP13.23□□□□□ -0.29
TRIM56-201ENST00000306085 TRAV6A0A075B6T7 132 aa13.23□□□□□ -0.29
TRIM56-201ENST00000306085 RAB5BP61020 215 aa13.23□□□□□ -0.29
TRIM56-201ENST00000306085 SLC13A2Q13183 592 aa13.23□□□□□ -0.29
TRIM56-201ENST00000306085 ASTE1Q2TB18 679 aaPredicted RBP13.23□□□□□ -0.29
TRIM56-201ENST00000306085 FAM83HQ6ZRV2 1179 aaPredicted RBP13.23□□□□□ -0.29
TRIM56-201ENST00000306085 YIPF7Q8N8F6 280 aa13.23□□□□□ -0.29
TRIM56-201ENST00000306085 FAM110BQ8TC76 370 aa13.23□□□□□ -0.29
TRIM56-201ENST00000306085 LRTM1Q9HBL6 345 aa13.23□□□□□ -0.29
TRIM56-201ENST00000306085 ZNRF3Q9ULT6 936 aa13.23□□□□□ -0.29
TRIM56-201ENST00000306085 TRAF6Q9Y4K3 522 aa13.23□□□□□ -0.29
TRIM56-201ENST00000306085 ELOVL7A1L3X0 281 aa13.23□□□□□ -0.29
TRIM56-201ENST00000306085 CENPBD1B2RD01 187 aa13.23□□□□□ -0.29
TRIM56-201ENST00000306085 IFNA4P05014 189 aa13.23□□□□□ -0.29
TRIM56-201ENST00000306085 AVPR1BP47901 424 aa13.23□□□□□ -0.29
TRIM56-201ENST00000306085 RBM48Q5RL73 367 aaKnown RBP13.23□□□□□ -0.29
TRIM56-201ENST00000306085 GARNL3Q5VVW2 1013 aa13.23□□□□□ -0.29
TRIM56-201ENST00000306085 SLC8B1Q6J4K2 584 aa13.23□□□□□ -0.29
TRIM56-201ENST00000306085 CCDC28AQ8IWP9 274 aa13.23□□□□□ -0.29
TRIM56-201ENST00000306085 SEMA6BQ9H3T3 888 aa13.23□□□□□ -0.29
TRIM56-201ENST00000306085 GDF3Q9NR23 364 aa13.23□□□□□ -0.29
TRIM56-201ENST00000306085 PTBP2Q9UKA9 531 aaKnown RBP13.23□□□□□ -0.29
TRIM56-201ENST00000306085 TBC1D3DA0A087WVF3 549 aa13.23□□□□□ -0.29
TRIM56-201ENST00000306085 TBC1D3IA0A087WXS9 549 aa13.23□□□□□ -0.29
TRIM56-201ENST00000306085 TBC1D3EA0A087X179 549 aa13.23□□□□□ -0.29
TRIM56-201ENST00000306085 TBC1D3KA0A087X1G2 549 aa13.23□□□□□ -0.29
TRIM56-201ENST00000306085 TBC1D3FA6NER0 549 aaPredicted RBP13.23□□□□□ -0.29
TRIM56-201ENST00000306085 TBC1D3LB9A6J9 549 aa13.23□□□□□ -0.29
TRIM56-201ENST00000306085 E5RJQ4 531 aa13.23□□□□□ -0.29
TRIM56-201ENST00000306085 TBC1D3HP0C7X1 549 aa13.23□□□□□ -0.29
TRIM56-201ENST00000306085 TBC1D3GQ6DHY5 549 aa13.23□□□□□ -0.29
TRIM56-201ENST00000306085 TBC1D3CQ6IPX1 549 aa13.23□□□□□ -0.29
TRIM56-201ENST00000306085 TBC1D3Q8IZP1 549 aaPredicted RBP13.23□□□□□ -0.29
TRIM56-201ENST00000306085 FAM149AA5PLN7 773 aa13.23□□□□□ -0.29
TRIM56-201ENST00000306085 GRIA1P42261 906 aa13.23□□□□□ -0.29
TRIM56-201ENST00000306085 GTF2A2P52657 109 aa13.23□□□□□ -0.29
TRIM56-201ENST00000306085 GBX2P52951 348 aaPredicted RBP13.23□□□□□ -0.29
TRIM56-201ENST00000306085 TBRG1Q3YBR2 411 aa13.23□□□□□ -0.29
TRIM56-201ENST00000306085 CAPN13Q6MZZ7 669 aaPredicted RBP13.23□□□□□ -0.29
TRIM56-201ENST00000306085 CES5AQ6NT32 575 aa13.23□□□□□ -0.29
TRIM56-201ENST00000306085 MOXD1Q6UVY6 613 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms