RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 SPPL2AQ8TCT8 520 aa12.86□□□□□ -0.35
TRIM35-201ENST00000305364 SLC22A17Q8WUG5 538 aa12.86□□□□□ -0.35
TRIM35-201ENST00000305364 SLC13A3Q8WWT9 602 aa12.86□□□□□ -0.35
TRIM35-201ENST00000305364 LINGO1Q96FE5 620 aa12.86□□□□□ -0.35
TRIM35-201ENST00000305364 COPS4Q9BT78 406 aa12.86□□□□□ -0.35
TRIM35-201ENST00000305364 MARCH4Q9P2E8 410 aaPredicted RBP12.86□□□□□ -0.35
TRIM35-201ENST00000305364 OAS3Q9Y6K5 1087 aaKnown RBP12.86□□□□□ -0.35
TRIM35-201ENST00000305364 CDC7O00311 574 aa12.86□□□□□ -0.35
TRIM35-201ENST00000305364 DFNA5O60443 496 aa12.86□□□□□ -0.35
TRIM35-201ENST00000305364 STAU1O95793 577 aaKnown RBP12.86□□□□□ -0.35
TRIM35-201ENST00000305364 JUNBP17275 347 aaPredicted RBP12.86□□□□□ -0.35
TRIM35-201ENST00000305364 GABARAPL2P60520 117 aa12.86□□□□□ -0.35
TRIM35-201ENST00000305364 RAPSNQ13702 412 aa12.86□□□□□ -0.35
TRIM35-201ENST00000305364 MED22Q15528 200 aa12.86□□□□□ -0.35
TRIM35-201ENST00000305364 DESI1Q6ICB0 168 aa12.86□□□□□ -0.35
TRIM35-201ENST00000305364 ANKRD46Q86W74 232 aa12.86□□□□□ -0.35
TRIM35-201ENST00000305364 TMEM151AQ8N4L1 468 aa12.86□□□□□ -0.35
TRIM35-201ENST00000305364 ASCC1Q8N9N2 400 aaKnown RBP12.86□□□□□ -0.35
TRIM35-201ENST00000305364 RPL3LQ92901 407 aaKnown RBP12.86□□□□□ -0.35
TRIM35-201ENST00000305364 KCNS3Q9BQ31 491 aa12.86□□□□□ -0.35
TRIM35-201ENST00000305364 AIG1Q9NVV5 245 aa12.86□□□□□ -0.35
TRIM35-201ENST00000305364 ABCD2Q9UBJ2 740 aa12.86□□□□□ -0.35
TRIM35-201ENST00000305364 DUSP12Q9UNI6 340 aa12.86□□□□□ -0.35
TRIM35-201ENST00000305364 PCDHA9Q9Y5H5 950 aa12.86□□□□□ -0.35
TRIM35-201ENST00000305364 COL24A1Q17RW2 1714 aa12.85□□□□□ -0.35
TRIM35-201ENST00000305364 RGS14O43566 566 aa12.85□□□□□ -0.35
TRIM35-201ENST00000305364 MITFO75030 526 aaPredicted RBP12.85□□□□□ -0.35
TRIM35-201ENST00000305364 ECI2O75521 394 aa12.85□□□□□ -0.35
TRIM35-201ENST00000305364 EEDO75530 441 aaKnown RBP12.85□□□□□ -0.35
TRIM35-201ENST00000305364 DNAJB5O75953 348 aa12.85□□□□□ -0.35
TRIM35-201ENST00000305364 SCELO95171 688 aa12.85□□□□□ -0.35
TRIM35-201ENST00000305364 HOXD10P28358 340 aa12.85□□□□□ -0.35
TRIM35-201ENST00000305364 MRPL28Q13084 256 aaKnown RBP12.85□□□□□ -0.35
TRIM35-201ENST00000305364 C6orf136Q5SQH8 315 aa12.85□□□□□ -0.35
TRIM35-201ENST00000305364 OSTM1Q86WC4 334 aa12.85□□□□□ -0.35
TRIM35-201ENST00000305364 RAB43Q86YS6 212 aa12.85□□□□□ -0.35
TRIM35-201ENST00000305364 GALNT12Q8IXK2 581 aa12.85□□□□□ -0.35
TRIM35-201ENST00000305364 OR13C4Q8NGS5 318 aa12.85□□□□□ -0.35
TRIM35-201ENST00000305364 PCED1BQ96HM7 432 aa12.85□□□□□ -0.35
TRIM35-201ENST00000305364 ZIM2Q9NZV7 527 aa12.85□□□□□ -0.35
TRIM35-201ENST00000305364 WNK3Q9BYP7 1800 aa12.85□□□□□ -0.35
TRIM35-201ENST00000305364 CYP2C18P33260 490 aa12.85□□□□□ -0.35
TRIM35-201ENST00000305364 KCNC1P48547 511 aa12.85□□□□□ -0.35
TRIM35-201ENST00000305364 MLLT10P55197 1068 aa12.85□□□□□ -0.35
TRIM35-201ENST00000305364 PWP1Q13610 501 aa12.85□□□□□ -0.35
TRIM35-201ENST00000305364 ZCCHC8Q6NZY4 707 aaKnown RBP12.85□□□□□ -0.35
TRIM35-201ENST00000305364 TSPEARQ8WU66 669 aa12.85□□□□□ -0.35
TRIM35-201ENST00000305364 DNAJB3Q8WWF6 145 aa12.85□□□□□ -0.35
TRIM35-201ENST00000305364 TANKQ92844 425 aa12.85□□□□□ -0.35
TRIM35-201ENST00000305364 MYDGFQ969H8 173 aa12.85□□□□□ -0.35
TRIM35-201ENST00000305364 PPP3R2Q96LZ3 170 aa12.85□□□□□ -0.35
TRIM35-201ENST00000305364 IPPQ9Y573 584 aa12.85□□□□□ -0.35
TRIM35-201ENST00000305364 ARL5AQ9Y689 179 aa12.85□□□□□ -0.35
TRIM35-201ENST00000305364 TRIP11Q15643 1979 aa12.85□□□□□ -0.35
TRIM35-201ENST00000305364 PRMT5O14744 637 aaPredicted RBP12.85□□□□□ -0.35
TRIM35-201ENST00000305364 MYCLP1P12525 358 aaPredicted RBP12.85□□□□□ -0.35
TRIM35-201ENST00000305364 CD1DP15813 335 aa12.85□□□□□ -0.35
TRIM35-201ENST00000305364 ARSDP51689 593 aa12.85□□□□□ -0.35
TRIM35-201ENST00000305364 RPS3AP61247 264 aaKnown RBP12.85□□□□□ -0.35
TRIM35-201ENST00000305364 EMX2Q04743 252 aa12.85□□□□□ -0.35
TRIM35-201ENST00000305364 TSTA3Q13630 321 aaPredicted RBP12.85□□□□□ -0.35
TRIM35-201ENST00000305364 TIGD6Q17RP2 521 aa12.85□□□□□ -0.35
TRIM35-201ENST00000305364 TYSND1Q2T9J0 566 aa12.85□□□□□ -0.35
TRIM35-201ENST00000305364 LBX2Q6XYB7 198 aa12.85□□□□□ -0.35
TRIM35-201ENST00000305364 ZNF621Q6ZSS3 439 aa12.85□□□□□ -0.35
TRIM35-201ENST00000305364 NECAB2Q7Z6G3 386 aa12.85□□□□□ -0.35
TRIM35-201ENST00000305364 TAGAPQ8N103 731 aa12.85□□□□□ -0.35
TRIM35-201ENST00000305364 GMLQ99445 158 aa12.85□□□□□ -0.35
TRIM35-201ENST00000305364 IRF2BPLQ9H1B7 796 aa12.85□□□□□ -0.35
TRIM35-201ENST00000305364 TFB2MQ9H5Q4 396 aaKnown RBP12.85□□□□□ -0.35
TRIM35-201ENST00000305364 DYRK4Q9NR20 520 aa12.85□□□□□ -0.35
TRIM35-201ENST00000305364 ISPDA4D126 451 aa12.84□□□□□ -0.35
TRIM35-201ENST00000305364 ARVCFO00192 962 aa12.84□□□□□ -0.35
TRIM35-201ENST00000305364 RAMP2O60895 175 aa12.84□□□□□ -0.35
TRIM35-201ENST00000305364 DDNO94850 711 aaPredicted RBP12.84□□□□□ -0.35
TRIM35-201ENST00000305364 MAD2L1Q13257 205 aaPredicted RBP12.84□□□□□ -0.35
TRIM35-201ENST00000305364 OR4D1Q15615 310 aa12.84□□□□□ -0.35
TRIM35-201ENST00000305364 FAM187BQ17R55 369 aa12.84□□□□□ -0.35
TRIM35-201ENST00000305364 GPR153Q6NV75 609 aa12.84□□□□□ -0.35
TRIM35-201ENST00000305364 TXNDC11Q6PKC3 985 aa12.84□□□□□ -0.35
TRIM35-201ENST00000305364 GLT6D1Q7Z4J2 308 aa12.84□□□□□ -0.35
TRIM35-201ENST00000305364 PHACTR4Q8IZ21 702 aa12.84□□□□□ -0.35
TRIM35-201ENST00000305364 MUL1Q969V5 352 aa12.84□□□□□ -0.35
TRIM35-201ENST00000305364 L3HYPDHQ96EM0 354 aa12.84□□□□□ -0.35
TRIM35-201ENST00000305364 MRGPRX2Q96LB1 330 aa12.84□□□□□ -0.35
TRIM35-201ENST00000305364 ZFP42Q96MM3 310 aa12.84□□□□□ -0.35
TRIM35-201ENST00000305364 CSF3RQ99062 836 aa12.84□□□□□ -0.35
TRIM35-201ENST00000305364 CTRCQ99895 268 aa12.84□□□□□ -0.35
TRIM35-201ENST00000305364 TMEM246Q9BRR3 403 aa12.84□□□□□ -0.35
TRIM35-201ENST00000305364 NUSAP1Q9BXS6 441 aaKnown RBP12.84□□□□□ -0.35
TRIM35-201ENST00000305364 VPS9D1Q9Y2B5 631 aa12.84□□□□□ -0.35
TRIM35-201ENST00000305364 PCDHGA3Q9Y5H0 932 aa12.84□□□□□ -0.35
TRIM35-201ENST00000305364 FXYD1O00168 92 aa12.84□□□□□ -0.35
TRIM35-201ENST00000305364 UPK1BO75841 260 aa12.84□□□□□ -0.35
TRIM35-201ENST00000305364 HPRP00739 348 aa12.84□□□□□ -0.35
TRIM35-201ENST00000305364 ARCN1P48444 511 aaKnown RBP12.84□□□□□ -0.35
TRIM35-201ENST00000305364 RGS4P49798 205 aa12.84□□□□□ -0.35
TRIM35-201ENST00000305364 CDC42EP1Q00587 391 aa12.84□□□□□ -0.35
TRIM35-201ENST00000305364 EFEMP1Q12805 493 aa12.84□□□□□ -0.35
TRIM35-201ENST00000305364 CDK5R2Q13319 367 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms