RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 ATF4P18848 351 aaPredicted RBP7.55□□□□□ -1.2
SF3B3-201ENST00000302516 UGT1A6P19224 532 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 UGT1A1P22309 533 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 UGT1A4P22310 534 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 EIF2S3P41091 472 aaKnown RBP7.55□□□□□ -1.2
SF3B3-201ENST00000302516 PTGER3P43115 390 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 YBEYP58557 167 aaPredicted RBP7.55□□□□□ -1.2
SF3B3-201ENST00000302516 TNFRSF25Q93038 417 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 ZC3H10Q96K80 434 aaKnown RBP7.55□□□□□ -1.2
SF3B3-201ENST00000302516 RAB11FIP5Q9BXF6 653 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 UGT1A7Q9HAW7 530 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 UGT1A10Q9HAW8 530 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 UGT1A8Q9HAW9 530 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 SOHLH2Q9NX45 425 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 PTPRJQ12913 1337 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 SLC2A2P11168 524 aaPredicted RBP7.55□□□□□ -1.2
SF3B3-201ENST00000302516 PKMP14618 531 aaKnown RBP7.55□□□□□ -1.2
SF3B3-201ENST00000302516 PLEKHG4Q58EX7 1191 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 KIAA0930Q6ICG6 404 aaPredicted RBP7.55□□□□□ -1.2
SF3B3-201ENST00000302516 ANO7Q6IWH7 933 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 MED27Q6P2C8 311 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 OR4C6Q8NH72 309 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 SLC13A3Q8WWT9 602 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 PRICKLE1Q96MT3 831 aaPredicted RBP7.55□□□□□ -1.2
SF3B3-201ENST00000302516 PSKH2Q96QS6 385 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 IGSF9Q9P2J2 1179 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 STOMP27105 288 aa7.54□□□□□ -1.2
SF3B3-201ENST00000302516 SPIN4Q56A73 249 aa7.54□□□□□ -1.2
SF3B3-201ENST00000302516 ADGRG6Q86SQ4 1221 aa7.54□□□□□ -1.2
SF3B3-201ENST00000302516 C11orf16Q9NQ32 467 aa7.54□□□□□ -1.2
SF3B3-201ENST00000302516 ZNF451Q9Y4E5 1061 aa7.54□□□□□ -1.2
SF3B3-201ENST00000302516 FKBP7Q9Y680 259 aa7.54□□□□□ -1.2
SF3B3-201ENST00000302516 A0A0G2JPF8 293 aa7.54□□□□□ -1.2
SF3B3-201ENST00000302516 SMIM35A0A1B0GVV1 85 aa7.54□□□□□ -1.2
SF3B3-201ENST00000302516 TMEM150BA6NC51 233 aa7.54□□□□□ -1.2
SF3B3-201ENST00000302516 HNRNPCL3B7ZW38 293 aa7.54□□□□□ -1.2
SF3B3-201ENST00000302516 H0YJX3 145 aa7.54□□□□□ -1.2
SF3B3-201ENST00000302516 PRKD3O94806 890 aa7.54□□□□□ -1.2
SF3B3-201ENST00000302516 HNRNPCL4P0DMR1 293 aa7.54□□□□□ -1.2
SF3B3-201ENST00000302516 CAPSQ13938 189 aa7.54□□□□□ -1.2
SF3B3-201ENST00000302516 SEMA3AQ14563 771 aa7.54□□□□□ -1.2
SF3B3-201ENST00000302516 SNX20Q7Z614 316 aa7.54□□□□□ -1.2
SF3B3-201ENST00000302516 ZNF563Q8TA94 476 aa7.54□□□□□ -1.2
SF3B3-201ENST00000302516 ADAMTS15Q8TE58 950 aa7.54□□□□□ -1.2
SF3B3-201ENST00000302516 ITFG2Q969R8 447 aa7.54□□□□□ -1.2
SF3B3-201ENST00000302516 GAD1Q99259 594 aa7.54□□□□□ -1.2
SF3B3-201ENST00000302516 E9PAM4 449 aa7.54□□□□□ -1.2
SF3B3-201ENST00000302516 ENTPD6O75354 484 aa7.54□□□□□ -1.2
SF3B3-201ENST00000302516 TACSTD2P09758 323 aa7.54□□□□□ -1.2
SF3B3-201ENST00000302516 PET100P0DJ07 73 aa7.54□□□□□ -1.2
SF3B3-201ENST00000302516 RFTN1Q14699 578 aaPredicted RBP7.54□□□□□ -1.2
SF3B3-201ENST00000302516 ISLR2Q6UXK2 745 aa7.54□□□□□ -1.2
SF3B3-201ENST00000302516 BAIAP2L2Q6UXY1 529 aa7.54□□□□□ -1.2
SF3B3-201ENST00000302516 ZNF517Q6ZMY9 492 aaPredicted RBP7.54□□□□□ -1.2
SF3B3-201ENST00000302516 FRRS1Q6ZNA5 592 aa7.54□□□□□ -1.2
SF3B3-201ENST00000302516 PDSS2Q86YH6 399 aa7.54□□□□□ -1.2
SF3B3-201ENST00000302516 LIX1Q8N485 282 aa7.54□□□□□ -1.2
SF3B3-201ENST00000302516 NUP50Q9UKX7 468 aa7.54□□□□□ -1.2
SF3B3-201ENST00000302516 ABCG2Q9UNQ0 655 aa7.54□□□□□ -1.2
SF3B3-201ENST00000302516 FAM189A1O60320 539 aa7.54□□□□□ -1.2
SF3B3-201ENST00000302516 PRAMEF12O95522 483 aa7.54□□□□□ -1.2
SF3B3-201ENST00000302516 C22orf31O95567 290 aa7.54□□□□□ -1.2
SF3B3-201ENST00000302516 AOC1P19801 751 aa7.54□□□□□ -1.2
SF3B3-201ENST00000302516 IST1P53990 364 aa7.54□□□□□ -1.2
SF3B3-201ENST00000302516 ARF5P84085 180 aa7.54□□□□□ -1.2
SF3B3-201ENST00000302516 RASGEF1BQ0VAM2 473 aa7.54□□□□□ -1.2
SF3B3-201ENST00000302516 MERTKQ12866 999 aa7.54□□□□□ -1.2
SF3B3-201ENST00000302516 BTG3Q14201 252 aaPredicted RBP7.54□□□□□ -1.2
SF3B3-201ENST00000302516 TCEAL6Q6IPX3 200 aa7.54□□□□□ -1.2
SF3B3-201ENST00000302516 RHBDF2Q6PJF5 856 aa7.54□□□□□ -1.2
SF3B3-201ENST00000302516 ZDHHC21Q8IVQ6 265 aa7.54□□□□□ -1.2
SF3B3-201ENST00000302516 ZNF781Q8N8C0 355 aa7.54□□□□□ -1.2
SF3B3-201ENST00000302516 FCRL2Q96LA5 508 aaPredicted RBP7.54□□□□□ -1.2
SF3B3-201ENST00000302516 LENG8Q96PV6 779 aaPredicted RBP7.54□□□□□ -1.2
SF3B3-201ENST00000302516 ZDHHC4Q9NPG8 344 aa7.54□□□□□ -1.2
SF3B3-201ENST00000302516 LRRC42Q9Y546 428 aa7.54□□□□□ -1.2
SF3B3-201ENST00000302516 TISP43B9A030 160 aa7.54□□□□□ -1.2
SF3B3-201ENST00000302516 SLC7A4O43246 635 aa7.54□□□□□ -1.2
SF3B3-201ENST00000302516 TRIM3O75382 744 aaPredicted RBP7.54□□□□□ -1.2
SF3B3-201ENST00000302516 ZNF432O94892 652 aa7.54□□□□□ -1.2
SF3B3-201ENST00000302516 HMGN1P05114 100 aa7.54□□□□□ -1.2
SF3B3-201ENST00000302516 EPHX2P34913 555 aa7.54□□□□□ -1.2
SF3B3-201ENST00000302516 AP1S1P61966 158 aa7.54□□□□□ -1.2
SF3B3-201ENST00000302516 MOGQ16653 247 aa7.54□□□□□ -1.2
SF3B3-201ENST00000302516 ADGRD2Q7Z7M1 963 aa7.54□□□□□ -1.2
SF3B3-201ENST00000302516 ZBED6CLQ96FA7 236 aaPredicted RBP7.54□□□□□ -1.2
SF3B3-201ENST00000302516 CNDP2Q96KP4 475 aaKnown RBP7.54□□□□□ -1.2
SF3B3-201ENST00000302516 PDGFDQ9GZP0 370 aaPredicted RBP7.54□□□□□ -1.2
SF3B3-201ENST00000302516 SH3BGRLO75368 114 aa7.54□□□□□ -1.2
SF3B3-201ENST00000302516 LAMP2P13473 410 aa7.54□□□□□ -1.2
SF3B3-201ENST00000302516 EPCAMP16422 314 aa7.54□□□□□ -1.2
SF3B3-201ENST00000302516 STXBP1P61764 594 aaKnown RBP7.54□□□□□ -1.2
SF3B3-201ENST00000302516 TRAM1Q15629 374 aa7.54□□□□□ -1.2
SF3B3-201ENST00000302516 IL23RQ5VWK5 629 aa7.54□□□□□ -1.2
SF3B3-201ENST00000302516 SLC43A3Q8NBI5 491 aa7.54□□□□□ -1.2
SF3B3-201ENST00000302516 KREMEN1Q96MU8 473 aa7.54□□□□□ -1.2
SF3B3-201ENST00000302516 PGLYRP2Q96PD5 576 aa7.54□□□□□ -1.2
SF3B3-201ENST00000302516 GPER1Q99527 375 aa7.54□□□□□ -1.2
SF3B3-201ENST00000302516 TFB2MQ9H5Q4 396 aaKnown RBP7.54□□□□□ -1.2
SF3B3-201ENST00000302516 OXSMQ9NWU1 459 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms