RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 CDK5RAP1Q96SZ6 601 aaKnown RBP10.73□□□□□ -0.69
ZNF558-201ENST00000301475 SLC39A8Q9C0K1 460 aa10.73□□□□□ -0.69
ZNF558-201ENST00000301475 ACOT13Q9NPJ3 140 aa10.73□□□□□ -0.69
ZNF558-201ENST00000301475 ZIM2Q9NZV7 527 aa10.73□□□□□ -0.69
ZNF558-201ENST00000301475 AGO1Q9UL18 857 aaKnown RBP10.73□□□□□ -0.69
ZNF558-201ENST00000301475 EIF3LQ9Y262 564 aaKnown RBP10.73□□□□□ -0.69
ZNF558-201ENST00000301475 METTL15A6NJ78 407 aa10.73□□□□□ -0.69
ZNF558-201ENST00000301475 SUPT3HB4E1H0 165 aa10.73□□□□□ -0.69
ZNF558-201ENST00000301475 MATN3O15232 486 aa10.73□□□□□ -0.69
ZNF558-201ENST00000301475 DFNA5O60443 496 aa10.73□□□□□ -0.69
ZNF558-201ENST00000301475 CYP11A1P05108 521 aa10.73□□□□□ -0.69
ZNF558-201ENST00000301475 BMP1P13497 986 aa10.73□□□□□ -0.69
ZNF558-201ENST00000301475 AGTR2P50052 363 aa10.73□□□□□ -0.69
ZNF558-201ENST00000301475 ERVK-8P63133 956 aa10.73□□□□□ -0.69
ZNF558-201ENST00000301475 ZNF33AQ06730 810 aa10.73□□□□□ -0.69
ZNF558-201ENST00000301475 PRKG2Q13237 762 aa10.73□□□□□ -0.69
ZNF558-201ENST00000301475 GBX1Q14549 363 aa10.73□□□□□ -0.69
ZNF558-201ENST00000301475 LAPTM4AQ15012 233 aa10.73□□□□□ -0.69
ZNF558-201ENST00000301475 ZNF404Q494X3 552 aa10.73□□□□□ -0.69
ZNF558-201ENST00000301475 ATP6AP1LQ52LC2 224 aa10.73□□□□□ -0.69
ZNF558-201ENST00000301475 C6orf136Q5SQH8 315 aa10.73□□□□□ -0.69
ZNF558-201ENST00000301475 LBX2Q6XYB7 198 aa10.73□□□□□ -0.69
ZNF558-201ENST00000301475 C14orf80Q86SX3 495 aa10.73□□□□□ -0.69
ZNF558-201ENST00000301475 TAC4Q86UU9 113 aa10.73□□□□□ -0.69
ZNF558-201ENST00000301475 CCDC103Q8IW40 242 aa10.73□□□□□ -0.69
ZNF558-201ENST00000301475 METTL4Q8N3J2 472 aa10.73□□□□□ -0.69
ZNF558-201ENST00000301475 FNDC5Q8NAU1 212 aa10.73□□□□□ -0.69
ZNF558-201ENST00000301475 ZNF548Q8NEK5 533 aaPredicted RBP10.73□□□□□ -0.69
ZNF558-201ENST00000301475 OR7G1Q8NGA0 311 aa10.73□□□□□ -0.69
ZNF558-201ENST00000301475 CCDC115Q96NT0 180 aa10.73□□□□□ -0.69
ZNF558-201ENST00000301475 BARD1Q99728 777 aaKnown RBP10.73□□□□□ -0.69
ZNF558-201ENST00000301475 MED10Q9BTT4 135 aa10.73□□□□□ -0.69
ZNF558-201ENST00000301475 UGT2B28Q9BY64 529 aa10.73□□□□□ -0.69
ZNF558-201ENST00000301475 C6orf62Q9GZU0 229 aaPredicted RBP10.73□□□□□ -0.69
ZNF558-201ENST00000301475 SIK2Q9H0K1 926 aa10.73□□□□□ -0.69
ZNF558-201ENST00000301475 KAT8Q9H7Z6 458 aaKnown RBP10.73□□□□□ -0.69
ZNF558-201ENST00000301475 PDGFCQ9NRA1 345 aa10.73□□□□□ -0.69
ZNF558-201ENST00000301475 VNN3Q9NY84 501 aa10.73□□□□□ -0.69
ZNF558-201ENST00000301475 ERAP1Q9NZ08 941 aa10.73□□□□□ -0.69
ZNF558-201ENST00000301475 KLK14Q9P0G3 267 aa10.73□□□□□ -0.69
ZNF558-201ENST00000301475 VAPAQ9P0L0 249 aa10.73□□□□□ -0.69
ZNF558-201ENST00000301475 GINS2Q9Y248 185 aa10.73□□□□□ -0.69
ZNF558-201ENST00000301475 FAM172BPA6NC97 362 aa10.72□□□□□ -0.69
ZNF558-201ENST00000301475 EFCAB9A8MZ26 197 aa10.72□□□□□ -0.69
ZNF558-201ENST00000301475 C19orf81C9J6K1 198 aa10.72□□□□□ -0.69
ZNF558-201ENST00000301475 TNPO2O14787 897 aaKnown RBP10.72□□□□□ -0.69
ZNF558-201ENST00000301475 PAPSS2O95340 614 aaPredicted RBP10.72□□□□□ -0.69
ZNF558-201ENST00000301475 RPS17P08708 135 aaKnown RBP10.72□□□□□ -0.69
ZNF558-201ENST00000301475 CD36P16671 472 aa10.72□□□□□ -0.69
ZNF558-201ENST00000301475 PRKCAP17252 672 aa10.72□□□□□ -0.69
ZNF558-201ENST00000301475 JUNDP17535 347 aa10.72□□□□□ -0.69
ZNF558-201ENST00000301475 GGT5P36269 586 aa10.72□□□□□ -0.69
ZNF558-201ENST00000301475 GRIK1P39086 918 aa10.72□□□□□ -0.69
ZNF558-201ENST00000301475 TSPY1Q01534 308 aa10.72□□□□□ -0.69
ZNF558-201ENST00000301475 YWHAHQ04917 246 aaPredicted RBP10.72□□□□□ -0.69
ZNF558-201ENST00000301475 SIM2Q14190 667 aaPredicted RBP10.72□□□□□ -0.69
ZNF558-201ENST00000301475 DCAF4L1Q3SXM0 396 aa10.72□□□□□ -0.69
ZNF558-201ENST00000301475 GDPD3Q7L5L3 318 aa10.72□□□□□ -0.69
ZNF558-201ENST00000301475 LIMS2Q7Z4I7 341 aa10.72□□□□□ -0.69
ZNF558-201ENST00000301475 GALNT7Q86SF2 657 aa10.72□□□□□ -0.69
ZNF558-201ENST00000301475 ZMIZ2Q8NF64 920 aa10.72□□□□□ -0.69
ZNF558-201ENST00000301475 OR2T12Q8NG77 320 aa10.72□□□□□ -0.69
ZNF558-201ENST00000301475 OR6F1Q8NGZ6 308 aa10.72□□□□□ -0.69
ZNF558-201ENST00000301475 PROX1Q92786 737 aa10.72□□□□□ -0.69
ZNF558-201ENST00000301475 KLRG1Q96E93 195 aa10.72□□□□□ -0.69
ZNF558-201ENST00000301475 ZNF599Q96NL3 588 aa10.72□□□□□ -0.69
ZNF558-201ENST00000301475 HBEGFQ99075 208 aa10.72□□□□□ -0.69
ZNF558-201ENST00000301475 OR2B2Q9GZK3 357 aa10.72□□□□□ -0.69
ZNF558-201ENST00000301475 GORASP2Q9H8Y8 452 aa10.72□□□□□ -0.69
ZNF558-201ENST00000301475 ADGRE2Q9UHX3 823 aa10.72□□□□□ -0.69
ZNF558-201ENST00000301475 UGT2A1Q9Y4X1 527 aa10.72□□□□□ -0.69
ZNF558-201ENST00000301475 POLR2AP24928 1970 aaKnown RBP10.72□□□□□ -0.69
ZNF558-201ENST00000301475 SAGE2PA6NJ88 616 aa10.72□□□□□ -0.69
ZNF558-201ENST00000301475 NPPAP01160 153 aa10.72□□□□□ -0.69
ZNF558-201ENST00000301475 TXNP10599 105 aaKnown RBP10.72□□□□□ -0.69
ZNF558-201ENST00000301475 SERPINH1P50454 418 aaKnown RBP10.72□□□□□ -0.69
ZNF558-201ENST00000301475 SEMA3AQ14563 771 aa10.72□□□□□ -0.69
ZNF558-201ENST00000301475 PTPRCAPQ14761 206 aa10.72□□□□□ -0.69
ZNF558-201ENST00000301475 ATAD3CQ5T2N8 411 aa10.72□□□□□ -0.69
ZNF558-201ENST00000301475 TMC5Q6UXY8 1006 aa10.72□□□□□ -0.69
ZNF558-201ENST00000301475 DPP9Q86TI2 863 aa10.72□□□□□ -0.69
ZNF558-201ENST00000301475 CYP4Z1Q86W10 505 aa10.72□□□□□ -0.69
ZNF558-201ENST00000301475 FAM126BQ8IXS8 530 aa10.72□□□□□ -0.69
ZNF558-201ENST00000301475 EID3Q8N140 333 aa10.72□□□□□ -0.69
ZNF558-201ENST00000301475 FBXO39Q8N4B4 442 aa10.72□□□□□ -0.69
ZNF558-201ENST00000301475 PSD4Q8NDX1 1056 aa10.72□□□□□ -0.69
ZNF558-201ENST00000301475 IL17RDQ8NFM7 739 aa10.72□□□□□ -0.69
ZNF558-201ENST00000301475 OR10A6Q8NH74 314 aa10.72□□□□□ -0.69
ZNF558-201ENST00000301475 CHAC2Q8WUX2 184 aa10.72□□□□□ -0.69
ZNF558-201ENST00000301475 ESAMQ96AP7 390 aa10.72□□□□□ -0.69
ZNF558-201ENST00000301475 SMOQ99835 787 aa10.72□□□□□ -0.69
ZNF558-201ENST00000301475 MFSD1Q9H3U5 465 aa10.72□□□□□ -0.69
ZNF558-201ENST00000301475 ZNF408Q9H9D4 720 aa10.72□□□□□ -0.69
ZNF558-201ENST00000301475 QPCTLQ9NXS2 382 aa10.72□□□□□ -0.69
ZNF558-201ENST00000301475 ZNF112Q9UJU3 913 aa10.72□□□□□ -0.69
ZNF558-201ENST00000301475 ASB1Q9Y576 335 aa10.72□□□□□ -0.69
ZNF558-201ENST00000301475 NCF1BA6NI72 391 aaPredicted RBP10.71□□□□□ -0.69
ZNF558-201ENST00000301475 NCF1CA8MVU1 366 aaPredicted RBP10.71□□□□□ -0.69
ZNF558-201ENST00000301475 TAF4O00268 1085 aa10.71□□□□□ -0.69
ZNF558-201ENST00000301475 ENPP3O14638 875 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms