RNA–Protein interactions for RNA: ENST00000301280.9

CHAF1A-201, Transcript of chromatin assembly factor 1 subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHAF1A, Length 3,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-201ENST00000301280 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.36■□□□□ 0.05
CHAF1A-201ENST00000301280 EPB41L1Q9H4G0 881 aa15.36■□□□□ 0.05
CHAF1A-201ENST00000301280 CCL26Q9Y258 94 aa15.36■□□□□ 0.05
CHAF1A-201ENST00000301280 SMIM31A0A1B0GVY4 71 aa15.35■□□□□ 0.05
CHAF1A-201ENST00000301280 PER2O15055 1255 aa15.35■□□□□ 0.05
CHAF1A-201ENST00000301280 CLOCKO15516 846 aa15.35■□□□□ 0.05
CHAF1A-201ENST00000301280 DFNA5O60443 496 aa15.35■□□□□ 0.05
CHAF1A-201ENST00000301280 CDK4P11802 303 aa15.35■□□□□ 0.05
CHAF1A-201ENST00000301280 MYCLP1P12525 358 aaPredicted RBP15.35■□□□□ 0.05
CHAF1A-201ENST00000301280 FASP25445 335 aa15.35■□□□□ 0.05
CHAF1A-201ENST00000301280 HNF1BP35680 557 aa15.35■□□□□ 0.05
CHAF1A-201ENST00000301280 DGKEP52429 567 aa15.35■□□□□ 0.05
CHAF1A-201ENST00000301280 PRKCQQ04759 706 aa15.35■□□□□ 0.05
CHAF1A-201ENST00000301280 IKBKEQ14164 716 aa15.35■□□□□ 0.05
CHAF1A-201ENST00000301280 INPP5AQ14642 412 aa15.35■□□□□ 0.05
CHAF1A-201ENST00000301280 TAF1AQ15573 450 aaPredicted RBP15.35■□□□□ 0.05
CHAF1A-201ENST00000301280 C6orf136Q5SQH8 315 aa15.35■□□□□ 0.05
CHAF1A-201ENST00000301280 LHX8Q68G74 356 aa15.35■□□□□ 0.05
CHAF1A-201ENST00000301280 C8orf82Q6P1X6 216 aaPredicted RBP15.35■□□□□ 0.05
CHAF1A-201ENST00000301280 OR2T34Q8NGX1 318 aa15.35■□□□□ 0.05
CHAF1A-201ENST00000301280 OR2T3Q8NH03 318 aa15.35■□□□□ 0.05
CHAF1A-201ENST00000301280 RIN3Q8TB24 985 aa15.35■□□□□ 0.05
CHAF1A-201ENST00000301280 KIAA1191Q96A73 305 aa15.35■□□□□ 0.05
CHAF1A-201ENST00000301280 IGSF21Q96ID5 467 aa15.35■□□□□ 0.05
CHAF1A-201ENST00000301280 BIRC8Q96P09 236 aa15.35■□□□□ 0.05
CHAF1A-201ENST00000301280 MTERF1Q99551 399 aaKnown RBP15.35■□□□□ 0.05
CHAF1A-201ENST00000301280 WARS2Q9UGM6 360 aaKnown RBP15.35■□□□□ 0.05
CHAF1A-201ENST00000301280 MED16Q9Y2X0 877 aa15.35■□□□□ 0.05
CHAF1A-201ENST00000301280 FAM92AA1XBS5 289 aa15.35■□□□□ 0.05
CHAF1A-201ENST00000301280 KDELR3O43731 214 aa15.35■□□□□ 0.05
CHAF1A-201ENST00000301280 KERAO60938 352 aa15.35■□□□□ 0.05
CHAF1A-201ENST00000301280 ITGALP20701 1170 aa15.35■□□□□ 0.05
CHAF1A-201ENST00000301280 RHDQ02161 417 aa15.35■□□□□ 0.05
CHAF1A-201ENST00000301280 ILF2Q12905 390 aaKnown RBP15.35■□□□□ 0.05
CHAF1A-201ENST00000301280 IRAK1BP1Q5VVH5 260 aa15.35■□□□□ 0.05
CHAF1A-201ENST00000301280 SERPINA13PQ6UXR4 307 aa15.35■□□□□ 0.05
CHAF1A-201ENST00000301280 GALNT5Q7Z7M9 940 aa15.35■□□□□ 0.05
CHAF1A-201ENST00000301280 VN1R3Q9BXE9 311 aa15.35■□□□□ 0.05
CHAF1A-201ENST00000301280 LINC00597Q9H2U6 94 aa15.35■□□□□ 0.05
CHAF1A-201ENST00000301280 NLE1Q9NVX2 485 aaPredicted RBP15.35■□□□□ 0.05
CHAF1A-201ENST00000301280 OPTCQ9UBM4 332 aa15.35■□□□□ 0.05
CHAF1A-201ENST00000301280 MBD1Q9UIS9 605 aaPredicted RBP15.35■□□□□ 0.05
CHAF1A-201ENST00000301280 UTS2RQ9UKP6 389 aa15.35■□□□□ 0.05
CHAF1A-201ENST00000301280 MYO15AQ9UKN7 3530 aa15.35■□□□□ 0.05
CHAF1A-201ENST00000301280 LOC730098B7Z3J9 87 aa15.35■□□□□ 0.05
CHAF1A-201ENST00000301280 TMX2-CTNND1H3BSU7 103 aa15.35■□□□□ 0.05
CHAF1A-201ENST00000301280 PLK4O00444 970 aa15.35■□□□□ 0.05
CHAF1A-201ENST00000301280 MAGEB3O15480 346 aa15.35■□□□□ 0.05
CHAF1A-201ENST00000301280 FFAR2O15552 330 aa15.35■□□□□ 0.05
CHAF1A-201ENST00000301280 SLC6A2P23975 617 aa15.35■□□□□ 0.05
CHAF1A-201ENST00000301280 EMP3P54852 163 aa15.35■□□□□ 0.05
CHAF1A-201ENST00000301280 ACVR1Q04771 509 aa15.35■□□□□ 0.05
CHAF1A-201ENST00000301280 GTF2H2Q13888 395 aa15.35■□□□□ 0.05
CHAF1A-201ENST00000301280 PLPP4Q5VZY2 271 aa15.35■□□□□ 0.05
CHAF1A-201ENST00000301280 GLYATQ6IB77 296 aa15.35■□□□□ 0.05
CHAF1A-201ENST00000301280 GTF2H2CQ6P1K8 395 aa15.35■□□□□ 0.05
CHAF1A-201ENST00000301280 TTC30BQ8N4P2 665 aa15.35■□□□□ 0.05
CHAF1A-201ENST00000301280 MYOCQ99972 504 aa15.35■□□□□ 0.05
CHAF1A-201ENST00000301280 ZNF490Q9ULM2 529 aaPredicted RBP15.35■□□□□ 0.05
CHAF1A-201ENST00000301280 DRGXA6NNA5 263 aa15.34■□□□□ 0.05
CHAF1A-201ENST00000301280 SAP18O00422 153 aaKnown RBP15.34■□□□□ 0.05
CHAF1A-201ENST00000301280 TEX28O15482 410 aa15.34■□□□□ 0.05
CHAF1A-201ENST00000301280 ZNF7P17097 686 aaPredicted RBP15.34■□□□□ 0.05
CHAF1A-201ENST00000301280 PSMA3P25788 255 aa15.34■□□□□ 0.05
CHAF1A-201ENST00000301280 RPL5P46777 297 aaKnown RBP15.34■□□□□ 0.05
CHAF1A-201ENST00000301280 CXorf57Q6NSI4 855 aaKnown RBP15.34■□□□□ 0.05
CHAF1A-201ENST00000301280 FAM162AQ96A26 154 aa15.34■□□□□ 0.05
CHAF1A-201ENST00000301280 SLCO4A1Q96BD0 722 aa15.34■□□□□ 0.05
CHAF1A-201ENST00000301280 DUS3LQ96G46 650 aaKnown RBP15.34■□□□□ 0.05
CHAF1A-201ENST00000301280 EGLN2Q96KS0 407 aa15.34■□□□□ 0.05
CHAF1A-201ENST00000301280 APOLD1Q96LR9 279 aa15.34■□□□□ 0.05
CHAF1A-201ENST00000301280 MRPL17Q9NRX2 175 aaKnown RBP15.34■□□□□ 0.05
CHAF1A-201ENST00000301280 RHBDL2Q9NX52 303 aa15.34■□□□□ 0.05
CHAF1A-201ENST00000301280 PRKAB1Q9Y478 270 aa15.34■□□□□ 0.05
CHAF1A-201ENST00000301280 TMEM189-UBE2V1I3L0A0 370 aa15.34■□□□□ 0.05
CHAF1A-201ENST00000301280 SNAP29O95721 258 aa15.34■□□□□ 0.05
CHAF1A-201ENST00000301280 HMGA1P17096 107 aaKnown RBP15.34■□□□□ 0.05
CHAF1A-201ENST00000301280 IL12AP29459 219 aa15.34■□□□□ 0.05
CHAF1A-201ENST00000301280 SLC26A3P40879 764 aa15.34■□□□□ 0.05
CHAF1A-201ENST00000301280 ZNF140P52738 457 aaPredicted RBP15.34■□□□□ 0.05
CHAF1A-201ENST00000301280 ELAVL2Q12926 359 aaKnown RBP15.34■□□□□ 0.05
CHAF1A-201ENST00000301280 UGT3A2Q3SY77 523 aa15.34■□□□□ 0.05
CHAF1A-201ENST00000301280 SPANXN4Q5MJ08 99 aa15.34■□□□□ 0.05
CHAF1A-201ENST00000301280 NANOGP8Q6NSW7 305 aa15.34■□□□□ 0.05
CHAF1A-201ENST00000301280 ZFP1Q6P2D0 407 aa15.34■□□□□ 0.05
CHAF1A-201ENST00000301280 TRAF7Q6Q0C0 670 aa15.34■□□□□ 0.05
CHAF1A-201ENST00000301280 GOLGA7Q7Z5G4 137 aa15.34■□□□□ 0.05
CHAF1A-201ENST00000301280 CMTR2Q8IYT2 770 aaKnown RBP15.34■□□□□ 0.05
CHAF1A-201ENST00000301280 NKAPQ8N5F7 415 aaKnown RBP15.34■□□□□ 0.05
CHAF1A-201ENST00000301280 RMND5BQ96G75 393 aaPredicted RBP15.34■□□□□ 0.05
CHAF1A-201ENST00000301280 WRAP53Q9BUR4 548 aaKnown RBP15.34■□□□□ 0.05
CHAF1A-201ENST00000301280 DPY30Q9C005 99 aa15.34■□□□□ 0.05
CHAF1A-201ENST00000301280 NANOGQ9H9S0 305 aa15.34■□□□□ 0.05
CHAF1A-201ENST00000301280 LSM7Q9UK45 103 aaKnown RBP15.34■□□□□ 0.05
CHAF1A-201ENST00000301280 GLYATL1P3A0A0U1RQE8 302 aa15.33■□□□□ 0.05
CHAF1A-201ENST00000301280 NRG2O14511 850 aaPredicted RBP15.33■□□□□ 0.05
CHAF1A-201ENST00000301280 LSM3P62310 102 aaKnown RBP15.33■□□□□ 0.05
CHAF1A-201ENST00000301280 UAP1L1Q3KQV9 507 aa15.33■□□□□ 0.05
CHAF1A-201ENST00000301280 SETMARQ53H47 684 aaPredicted RBP15.33■□□□□ 0.05
CHAF1A-201ENST00000301280 TMTC4Q5T4D3 741 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms