RNA–Protein interactions for RNA: ENST00000299267.8

GABRB3-201, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 4,494 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-201ENST00000299267 TMEM135Q86UB9 458 aa10.03□□□□□ -0.8
GABRB3-201ENST00000299267 ZC3H7AQ8IWR0 971 aaKnown RBP10.03□□□□□ -0.8
GABRB3-201ENST00000299267 C10orf53Q8N6V4 93 aa10.03□□□□□ -0.8
GABRB3-201ENST00000299267 ZCCHC10Q8TBK6 192 aa10.03□□□□□ -0.8
GABRB3-201ENST00000299267 RAD51AP1Q96B01 352 aa10.03□□□□□ -0.8
GABRB3-201ENST00000299267 NAF1Q96HR8 494 aaKnown RBP10.03□□□□□ -0.8
GABRB3-201ENST00000299267 PBX4Q9BYU1 374 aa10.03□□□□□ -0.8
GABRB3-201ENST00000299267 DOCK5Q9H7D0 1870 aa10.03□□□□□ -0.8
GABRB3-201ENST00000299267 SLC22A3O75751 556 aa10.02□□□□□ -0.8
GABRB3-201ENST00000299267 UBE3AQ05086 875 aa10.02□□□□□ -0.8
GABRB3-201ENST00000299267 FAM109BQ6ICB4 259 aaPredicted RBP10.02□□□□□ -0.8
GABRB3-201ENST00000299267 MBOAT1Q6ZNC8 495 aa10.02□□□□□ -0.8
GABRB3-201ENST00000299267 NXPE1Q8N323 547 aa10.02□□□□□ -0.8
GABRB3-201ENST00000299267 RBM15BQ8NDT2 890 aaKnown RBP10.02□□□□□ -0.8
GABRB3-201ENST00000299267 PHOSPHO2Q8TCD6 241 aa10.02□□□□□ -0.8
GABRB3-201ENST00000299267 LRTM1Q9HBL6 345 aa10.02□□□□□ -0.8
GABRB3-201ENST00000299267 CCDC177Q9NQR7 707 aaPredicted RBP10.02□□□□□ -0.8
GABRB3-201ENST00000299267 CDH7Q9ULB5 785 aa10.02□□□□□ -0.8
GABRB3-201ENST00000299267 SPTA1P02549 2419 aa10.02□□□□□ -0.8
GABRB3-201ENST00000299267 CNOT1A5YKK6 2376 aaKnown RBP10.02□□□□□ -0.8
GABRB3-201ENST00000299267 A8MUI8 341 aa10.02□□□□□ -0.81
GABRB3-201ENST00000299267 KIAA0355O15063 1070 aa10.02□□□□□ -0.81
GABRB3-201ENST00000299267 TCEA3O75764 348 aa10.02□□□□□ -0.81
GABRB3-201ENST00000299267 FOSL2P15408 326 aa10.02□□□□□ -0.81
GABRB3-201ENST00000299267 CXCR2P25025 360 aa10.02□□□□□ -0.81
GABRB3-201ENST00000299267 SLC16A1P53985 500 aa10.02□□□□□ -0.81
GABRB3-201ENST00000299267 ILF2Q12905 390 aaKnown RBP10.02□□□□□ -0.81
GABRB3-201ENST00000299267 SPIDRQ14159 915 aa10.02□□□□□ -0.81
GABRB3-201ENST00000299267 AAK1Q2M2I8 961 aa10.02□□□□□ -0.81
GABRB3-201ENST00000299267 ACSBG2Q5FVE4 666 aa10.02□□□□□ -0.81
GABRB3-201ENST00000299267 LDLRAP1Q5SW96 308 aa10.02□□□□□ -0.81
GABRB3-201ENST00000299267 TANGO2Q6ICL3 276 aa10.02□□□□□ -0.81
GABRB3-201ENST00000299267 IRGCQ6NXR0 463 aa10.02□□□□□ -0.81
GABRB3-201ENST00000299267 PRR23BQ6ZRT6 265 aa10.02□□□□□ -0.81
GABRB3-201ENST00000299267 ERN2Q76MJ5 926 aaKnown RBP10.02□□□□□ -0.81
GABRB3-201ENST00000299267 JPH3Q8WXH2 748 aaPredicted RBP10.02□□□□□ -0.81
GABRB3-201ENST00000299267 VPS33AQ96AX1 596 aa10.02□□□□□ -0.81
GABRB3-201ENST00000299267 OTUB1Q96FW1 271 aaPredicted RBP10.02□□□□□ -0.81
GABRB3-201ENST00000299267 OR52B2Q96RD2 323 aa10.02□□□□□ -0.81
GABRB3-201ENST00000299267 SMAD5Q99717 465 aaKnown RBP10.02□□□□□ -0.81
GABRB3-201ENST00000299267 SH3GL1Q99961 368 aa10.02□□□□□ -0.81
GABRB3-201ENST00000299267 ZBP1Q9H171 429 aa10.02□□□□□ -0.81
GABRB3-201ENST00000299267 ZNF576Q9H609 170 aa10.02□□□□□ -0.81
GABRB3-201ENST00000299267 ZDHHC2Q9UIJ5 367 aa10.02□□□□□ -0.81
GABRB3-201ENST00000299267 ENTPD4Q9Y227 616 aa10.02□□□□□ -0.81
GABRB3-201ENST00000299267 SNX5Q9Y5X3 404 aa10.02□□□□□ -0.81
GABRB3-201ENST00000299267 SEC16AO15027 2179 aa10.02□□□□□ -0.81
GABRB3-201ENST00000299267 QSER1Q2KHR3 1735 aa10.02□□□□□ -0.81
GABRB3-201ENST00000299267 B4DGG1 531 aa10.02□□□□□ -0.81
GABRB3-201ENST00000299267 SGTAO43765 313 aa10.02□□□□□ -0.81
GABRB3-201ENST00000299267 VPS4BO75351 444 aa10.02□□□□□ -0.81
GABRB3-201ENST00000299267 TGFB1P01137 390 aa10.02□□□□□ -0.81
GABRB3-201ENST00000299267 GBAP04062 536 aa10.02□□□□□ -0.81
GABRB3-201ENST00000299267 HMGA1P17096 107 aaKnown RBP10.02□□□□□ -0.81
GABRB3-201ENST00000299267 TRMT5Q32P41 509 aaKnown RBP10.02□□□□□ -0.81
GABRB3-201ENST00000299267 FAM78AQ5JUQ0 283 aa10.02□□□□□ -0.81
GABRB3-201ENST00000299267 PDE12Q6L8Q7 609 aaKnown RBP10.02□□□□□ -0.81
GABRB3-201ENST00000299267 HEATR4Q86WZ0 1026 aa10.02□□□□□ -0.81
GABRB3-201ENST00000299267 ATG16L2Q8NAA4 619 aa10.02□□□□□ -0.81
GABRB3-201ENST00000299267 TMEM145Q8NBT3 493 aa10.02□□□□□ -0.81
GABRB3-201ENST00000299267 TFGQ92734 400 aaPredicted RBP10.02□□□□□ -0.81
GABRB3-201ENST00000299267 RERGQ96A58 199 aaPredicted RBP10.02□□□□□ -0.81
GABRB3-201ENST00000299267 SLC39A13Q96H72 371 aa10.02□□□□□ -0.81
GABRB3-201ENST00000299267 C7orf26Q96N11 449 aa10.02□□□□□ -0.81
GABRB3-201ENST00000299267 ZSCAN5AQ9BUG6 496 aa10.02□□□□□ -0.81
GABRB3-201ENST00000299267 EQTNQ9NQ60 294 aa10.02□□□□□ -0.81
GABRB3-201ENST00000299267 SELENONQ9NZV5 590 aa10.02□□□□□ -0.81
GABRB3-201ENST00000299267 RIF1Q5UIP0 2472 aaKnown RBP10.02□□□□□ -0.81
GABRB3-201ENST00000299267 E7ESA3 106 aa10.01□□□□□ -0.81
GABRB3-201ENST00000299267 RFXANKO14593 260 aa10.01□□□□□ -0.81
GABRB3-201ENST00000299267 MUSKO15146 869 aa10.01□□□□□ -0.81
GABRB3-201ENST00000299267 TSPAN6O43657 245 aa10.01□□□□□ -0.81
GABRB3-201ENST00000299267 KRT36O76013 467 aa10.01□□□□□ -0.81
GABRB3-201ENST00000299267 EPN2O95208 641 aa10.01□□□□□ -0.81
GABRB3-201ENST00000299267 F11P03951 625 aa10.01□□□□□ -0.81
GABRB3-201ENST00000299267 CDH3P22223 829 aa10.01□□□□□ -0.81
GABRB3-201ENST00000299267 HPCAL1P37235 193 aa10.01□□□□□ -0.81
GABRB3-201ENST00000299267 IDH3AP50213 366 aa10.01□□□□□ -0.81
GABRB3-201ENST00000299267 CCT8P50990 548 aa10.01□□□□□ -0.81
GABRB3-201ENST00000299267 DAB2P98082 770 aa10.01□□□□□ -0.81
GABRB3-201ENST00000299267 SQLEQ14534 574 aa10.01□□□□□ -0.81
GABRB3-201ENST00000299267 ELAVL3Q14576 367 aaKnown RBP10.01□□□□□ -0.81
GABRB3-201ENST00000299267 NRF1Q16656 503 aa10.01□□□□□ -0.81
GABRB3-201ENST00000299267 PTCHD3Q3KNS1 767 aa10.01□□□□□ -0.81
GABRB3-201ENST00000299267 STK32CQ86UX6 486 aa10.01□□□□□ -0.81
GABRB3-201ENST00000299267 HPS6Q86YV9 775 aa10.01□□□□□ -0.81
GABRB3-201ENST00000299267 MCMBPQ9BTE3 642 aa10.01□□□□□ -0.81
GABRB3-201ENST00000299267 OXSMQ9NWU1 459 aa10.01□□□□□ -0.81
GABRB3-201ENST00000299267 MOCS1Q9NZB8 636 aa10.01□□□□□ -0.81
GABRB3-201ENST00000299267 OR1A2Q9Y585 309 aa10.01□□□□□ -0.81
GABRB3-201ENST00000299267 ARID1BQ8NFD5 2236 aaPredicted RBP10.01□□□□□ -0.81
GABRB3-201ENST00000299267 A0A1W2PQU0 124 aa10.01□□□□□ -0.81
GABRB3-201ENST00000299267 AKT2P31751 481 aa10.01□□□□□ -0.81
GABRB3-201ENST00000299267 MEF2AQ02078 507 aaPredicted RBP10.01□□□□□ -0.81
GABRB3-201ENST00000299267 GRIN2CQ14957 1233 aa10.01□□□□□ -0.81
GABRB3-201ENST00000299267 PHKG1Q16816 387 aa10.01□□□□□ -0.81
GABRB3-201ENST00000299267 SAMD4BQ5PRF9 694 aaKnown RBP10.01□□□□□ -0.81
GABRB3-201ENST00000299267 IZUMO2Q6UXV1 221 aa10.01□□□□□ -0.81
GABRB3-201ENST00000299267 BEND5Q7L4P6 421 aa10.01□□□□□ -0.81
GABRB3-201ENST00000299267 ZNF438Q7Z4V0 828 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms