RNA–Protein interactions for RNA: ENST00000298260.8

SKA3-201, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 2,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-201ENST00000298260 EEFSECP57772 596 aaKnown RBP13.29□□□□□ -0.28
SKA3-201ENST00000298260 CYP4F2P78329 520 aa13.29□□□□□ -0.28
SKA3-201ENST00000298260 EMX2Q04743 252 aa13.29□□□□□ -0.28
SKA3-201ENST00000298260 CYP4F3Q08477 520 aa13.29□□□□□ -0.28
SKA3-201ENST00000298260 TBRG1Q3YBR2 411 aa13.29□□□□□ -0.28
SKA3-201ENST00000298260 GTDC1Q4AE62 458 aa13.29□□□□□ -0.28
SKA3-201ENST00000298260 BRMS1LQ5PSV4 323 aa13.29□□□□□ -0.28
SKA3-201ENST00000298260 MOB2Q70IA6 237 aa13.29□□□□□ -0.28
SKA3-201ENST00000298260 GALNT10Q86SR1 603 aa13.29□□□□□ -0.28
SKA3-201ENST00000298260 SLC22A9Q8IVM8 553 aa13.29□□□□□ -0.28
SKA3-201ENST00000298260 FNDC5Q8NAU1 212 aa13.29□□□□□ -0.28
SKA3-201ENST00000298260 NPY6RQ99463 290 aa13.29□□□□□ -0.28
SKA3-201ENST00000298260 THUMPD3Q9BV44 507 aaKnown RBP13.29□□□□□ -0.28
SKA3-201ENST00000298260 KAT8Q9H7Z6 458 aaKnown RBP13.29□□□□□ -0.28
SKA3-201ENST00000298260 NDFIP2Q9NV92 336 aa13.29□□□□□ -0.28
SKA3-201ENST00000298260 DDIT4Q9NX09 232 aa13.29□□□□□ -0.28
SKA3-201ENST00000298260 EHD3Q9NZN3 535 aa13.29□□□□□ -0.28
SKA3-201ENST00000298260 RCOR3Q9P2K3 495 aaPredicted RBP13.29□□□□□ -0.28
SKA3-201ENST00000298260 LEF1Q9UJU2 399 aaPredicted RBP13.29□□□□□ -0.28
SKA3-201ENST00000298260 METTL15A6NJ78 407 aa13.29□□□□□ -0.28
SKA3-201ENST00000298260 ASB14A6NK59 587 aa13.29□□□□□ -0.28
SKA3-201ENST00000298260 AIREO43918 545 aa13.29□□□□□ -0.28
SKA3-201ENST00000298260 FAM20BO75063 409 aa13.29□□□□□ -0.28
SKA3-201ENST00000298260 EEDO75530 441 aaKnown RBP13.29□□□□□ -0.28
SKA3-201ENST00000298260 UBL4AP11441 157 aa13.29□□□□□ -0.28
SKA3-201ENST00000298260 POLR2EP19388 210 aaKnown RBP13.29□□□□□ -0.28
SKA3-201ENST00000298260 HTR2BP41595 481 aa13.29□□□□□ -0.28
SKA3-201ENST00000298260 MAXP61244 160 aa13.29□□□□□ -0.28
SKA3-201ENST00000298260 ZNF181Q2M3W8 571 aa13.29□□□□□ -0.28
SKA3-201ENST00000298260 ATP6AP1LQ52LC2 224 aa13.29□□□□□ -0.28
SKA3-201ENST00000298260 C9orf131Q5VYM1 1079 aa13.29□□□□□ -0.28
SKA3-201ENST00000298260 KANK2Q63ZY3 851 aa13.29□□□□□ -0.28
SKA3-201ENST00000298260 DLEU7Q6UYE1 221 aa13.29□□□□□ -0.28
SKA3-201ENST00000298260 Q6ZPB1 254 aaPredicted RBP13.29□□□□□ -0.28
SKA3-201ENST00000298260 C10orf111Q8N326 155 aa13.29□□□□□ -0.28
SKA3-201ENST00000298260 REPS2Q8NFH8 660 aa13.29□□□□□ -0.28
SKA3-201ENST00000298260 NCLNQ969V3 563 aa13.29□□□□□ -0.28
SKA3-201ENST00000298260 ZNF583Q96ND8 569 aa13.29□□□□□ -0.28
SKA3-201ENST00000298260 KCNS3Q9BQ31 491 aa13.29□□□□□ -0.28
SKA3-201ENST00000298260 CDADC1Q9BWV3 514 aa13.29□□□□□ -0.28
SKA3-201ENST00000298260 RANGRFQ9HD47 186 aaPredicted RBP13.29□□□□□ -0.28
SKA3-201ENST00000298260 CACNG4Q9UBN1 327 aa13.29□□□□□ -0.28
SKA3-201ENST00000298260 OR12D3Q9UGF7 316 aa13.29□□□□□ -0.28
SKA3-201ENST00000298260 ZNF225Q9UK10 706 aa13.29□□□□□ -0.28
SKA3-201ENST00000298260 ASB1Q9Y576 335 aa13.29□□□□□ -0.28
SKA3-201ENST00000298260 ANGPTL3Q9Y5C1 460 aa13.29□□□□□ -0.28
SKA3-201ENST00000298260 PDHXO00330 501 aa13.28□□□□□ -0.28
SKA3-201ENST00000298260 CTDSP2O14595 271 aa13.28□□□□□ -0.28
SKA3-201ENST00000298260 PTCHD3Q3KNS1 767 aa13.28□□□□□ -0.28
SKA3-201ENST00000298260 SYT6Q5T7P8 510 aaPredicted RBP13.28□□□□□ -0.28
SKA3-201ENST00000298260 ZNF438Q7Z4V0 828 aa13.28□□□□□ -0.28
SKA3-201ENST00000298260 ZDHHC17Q8IUH5 632 aa13.28□□□□□ -0.28
SKA3-201ENST00000298260 OR8H2Q8N162 312 aa13.28□□□□□ -0.28
SKA3-201ENST00000298260 SEPT1Q8WYJ6 367 aa13.28□□□□□ -0.28
SKA3-201ENST00000298260 WNT8BQ93098 351 aa13.28□□□□□ -0.28
SKA3-201ENST00000298260 TEPSINQ96N21 525 aa13.28□□□□□ -0.28
SKA3-201ENST00000298260 MMP28Q9H239 520 aa13.28□□□□□ -0.28
SKA3-201ENST00000298260 TREX1Q9NSU2 369 aa13.28□□□□□ -0.28
SKA3-201ENST00000298260 VPS4AQ9UN37 437 aa13.28□□□□□ -0.28
SKA3-201ENST00000298260 PKP3Q9Y446 797 aa13.28□□□□□ -0.28
SKA3-201ENST00000298260 PCDHGB6Q9Y5F9 930 aa13.28□□□□□ -0.28
SKA3-201ENST00000298260 TEX28O15482 410 aa13.28□□□□□ -0.28
SKA3-201ENST00000298260 CPNE3O75131 537 aaKnown RBP13.28□□□□□ -0.28
SKA3-201ENST00000298260 PAPSS2O95340 614 aaPredicted RBP13.28□□□□□ -0.28
SKA3-201ENST00000298260 PTTG1O95997 202 aa13.28□□□□□ -0.28
SKA3-201ENST00000298260 CYP11A1P05108 521 aa13.28□□□□□ -0.28
SKA3-201ENST00000298260 MYL3P08590 195 aa13.28□□□□□ -0.28
SKA3-201ENST00000298260 GTF2H3Q13889 308 aa13.28□□□□□ -0.28
SKA3-201ENST00000298260 TAB1Q15750 504 aa13.28□□□□□ -0.28
SKA3-201ENST00000298260 ZMAT1Q5H9K5 638 aa13.28□□□□□ -0.28
SKA3-201ENST00000298260 FAM160B1Q5W0V3 765 aa13.28□□□□□ -0.28
SKA3-201ENST00000298260 CEP68Q76N32 757 aa13.28□□□□□ -0.28
SKA3-201ENST00000298260 PROSER1Q86XN7 944 aa13.28□□□□□ -0.28
SKA3-201ENST00000298260 PJA1Q8NG27 643 aa13.28□□□□□ -0.28
SKA3-201ENST00000298260 ISG20Q96AZ6 181 aaKnown RBP13.28□□□□□ -0.28
SKA3-201ENST00000298260 L3HYPDHQ96EM0 354 aa13.28□□□□□ -0.28
SKA3-201ENST00000298260 RBM4BQ9BQ04 359 aaKnown RBP13.28□□□□□ -0.28
SKA3-201ENST00000298260 RBM4Q9BWF3 364 aaKnown RBP13.28□□□□□ -0.28
SKA3-201ENST00000298260 NUAK2Q9H093 628 aa13.28□□□□□ -0.28
SKA3-201ENST00000298260 OR51E2Q9H255 320 aa13.28□□□□□ -0.28
SKA3-201ENST00000298260 ACAD9Q9H845 621 aa13.28□□□□□ -0.28
SKA3-201ENST00000298260 RPRD1BQ9NQG5 326 aaKnown RBP13.28□□□□□ -0.28
SKA3-201ENST00000298260 AIG1Q9NVV5 245 aa13.28□□□□□ -0.28
SKA3-201ENST00000298260 KLK14Q9P0G3 267 aa13.28□□□□□ -0.28
SKA3-201ENST00000298260 DNAJB9Q9UBS3 223 aa13.28□□□□□ -0.28
SKA3-201ENST00000298260 ISPDA4D126 451 aa13.27□□□□□ -0.28
SKA3-201ENST00000298260 GOLGA8CPA6NN73 597 aa13.27□□□□□ -0.28
SKA3-201ENST00000298260 MYO1GB0I1T2 1018 aa13.27□□□□□ -0.28
SKA3-201ENST00000298260 SUPT3HB4E1H0 165 aa13.27□□□□□ -0.28
SKA3-201ENST00000298260 ADM5C9JUS6 153 aa13.27□□□□□ -0.28
SKA3-201ENST00000298260 HAT1O14929 419 aa13.27□□□□□ -0.28
SKA3-201ENST00000298260 GGT1P19440 569 aa13.27□□□□□ -0.28
SKA3-201ENST00000298260 MAP3K7CLP57077 242 aa13.27□□□□□ -0.28
SKA3-201ENST00000298260 ACOX1Q15067 660 aa13.27□□□□□ -0.28
SKA3-201ENST00000298260 GJC2Q5T442 439 aaPredicted RBP13.27□□□□□ -0.28
SKA3-201ENST00000298260 SLX4IPQ5VYV7 408 aa13.27□□□□□ -0.28
SKA3-201ENST00000298260 FAM126BQ8IXS8 530 aa13.27□□□□□ -0.28
SKA3-201ENST00000298260 GLB1L3Q8NCI6 653 aaPredicted RBP13.27□□□□□ -0.28
SKA3-201ENST00000298260 OR5H6Q8NGV6 325 aa13.27□□□□□ -0.28
SKA3-201ENST00000298260 JPH3Q8WXH2 748 aaPredicted RBP13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms