RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 SP140Q13342 867 aa15.25■□□□□ 0.03
FNDC1-201ENST00000297267 INTS6LQ5JSJ4 861 aaKnown RBP15.25■□□□□ 0.03
FNDC1-201ENST00000297267 UBR7Q8N806 425 aa15.25■□□□□ 0.03
FNDC1-201ENST00000297267 TMED9Q9BVK6 235 aa15.25■□□□□ 0.03
FNDC1-201ENST00000297267 COMMD3Q9UBI1 195 aa15.25■□□□□ 0.03
FNDC1-201ENST00000297267 HAT1O14929 419 aa15.25■□□□□ 0.03
FNDC1-201ENST00000297267 DHX15O43143 795 aaKnown RBP15.25■□□□□ 0.03
FNDC1-201ENST00000297267 TM7SF2O76062 418 aa15.25■□□□□ 0.03
FNDC1-201ENST00000297267 SNX4O95219 450 aa15.25■□□□□ 0.03
FNDC1-201ENST00000297267 PRKAR1AP10644 381 aa15.25■□□□□ 0.03
FNDC1-201ENST00000297267 ACVRL1P37023 503 aa15.25■□□□□ 0.03
FNDC1-201ENST00000297267 NUDT6P53370 316 aa15.25■□□□□ 0.03
FNDC1-201ENST00000297267 GNA12Q03113 381 aa15.25■□□□□ 0.03
FNDC1-201ENST00000297267 BNIP1Q12981 228 aa15.25■□□□□ 0.03
FNDC1-201ENST00000297267 CNPY1Q3B7I2 92 aa15.25■□□□□ 0.03
FNDC1-201ENST00000297267 TXNDC11Q6PKC3 985 aa15.25■□□□□ 0.03
FNDC1-201ENST00000297267 SEC14L1Q92503 715 aa15.25■□□□□ 0.03
FNDC1-201ENST00000297267 AP2M1Q96CW1 435 aa15.25■□□□□ 0.03
FNDC1-201ENST00000297267 TMEM74Q96NL1 305 aa15.25■□□□□ 0.03
FNDC1-201ENST00000297267 ZNF607Q96SK3 696 aa15.25■□□□□ 0.03
FNDC1-201ENST00000297267 ARL2P36404 184 aa15.24■□□□□ 0.03
FNDC1-201ENST00000297267 IRAK1BP1Q5VVH5 260 aa15.24■□□□□ 0.03
FNDC1-201ENST00000297267 SLC2A7Q6PXP3 512 aa15.24■□□□□ 0.03
FNDC1-201ENST00000297267 IQCKQ8N0W5 287 aa15.24■□□□□ 0.03
FNDC1-201ENST00000297267 SFRP1Q8N474 314 aa15.24■□□□□ 0.03
FNDC1-201ENST00000297267 COX4I2Q96KJ9 171 aa15.24■□□□□ 0.03
FNDC1-201ENST00000297267 C1QTNF7Q9BXJ2 289 aa15.24■□□□□ 0.03
FNDC1-201ENST00000297267 GIT1Q9Y2X7 761 aa15.24■□□□□ 0.03
FNDC1-201ENST00000297267 CPQQ9Y646 472 aa15.24■□□□□ 0.03
FNDC1-201ENST00000297267 GRM6O15303 877 aa15.24■□□□□ 0.03
FNDC1-201ENST00000297267 ANGPTL1O95841 491 aa15.24■□□□□ 0.03
FNDC1-201ENST00000297267 THRBP10828 461 aa15.24■□□□□ 0.03
FNDC1-201ENST00000297267 COLEC12Q5KU26 742 aa15.24■□□□□ 0.03
FNDC1-201ENST00000297267 LRRC38Q5VT99 294 aa15.24■□□□□ 0.03
FNDC1-201ENST00000297267 ASB18Q6ZVZ8 466 aa15.24■□□□□ 0.03
FNDC1-201ENST00000297267 SIPA1Q96FS4 1042 aa15.24■□□□□ 0.03
FNDC1-201ENST00000297267 OR2AG1Q9H205 316 aa15.24■□□□□ 0.03
FNDC1-201ENST00000297267 CCSER2Q9H7U1 834 aa15.24■□□□□ 0.03
FNDC1-201ENST00000297267 DPP7Q9UHL4 492 aa15.24■□□□□ 0.03
FNDC1-201ENST00000297267 HCN1O60741 890 aa15.24■□□□□ 0.03
FNDC1-201ENST00000297267 CCNKO75909 580 aa15.24■□□□□ 0.03
FNDC1-201ENST00000297267 PSMD4P55036 377 aaKnown RBP15.24■□□□□ 0.03
FNDC1-201ENST00000297267 ITGA1P56199 1179 aa15.24■□□□□ 0.03
FNDC1-201ENST00000297267 BNIP2Q12982 314 aa15.24■□□□□ 0.03
FNDC1-201ENST00000297267 TATDN1Q6P1N9 297 aa15.24■□□□□ 0.03
FNDC1-201ENST00000297267 LCLAT1Q6UWP7 414 aa15.24■□□□□ 0.03
FNDC1-201ENST00000297267 APLFQ8IW19 511 aaPredicted RBP15.24■□□□□ 0.03
FNDC1-201ENST00000297267 LMAN2LQ9H0V9 348 aa15.24■□□□□ 0.03
FNDC1-201ENST00000297267 ITM2CQ9NQX7 267 aa15.24■□□□□ 0.03
FNDC1-201ENST00000297267 NOCTQ9UK39 431 aaKnown RBP15.24■□□□□ 0.03
FNDC1-201ENST00000297267 PER2O15055 1255 aa15.24■□□□□ 0.03
FNDC1-201ENST00000297267 PSMA3P25788 255 aa15.24■□□□□ 0.03
FNDC1-201ENST00000297267 JAG1P78504 1218 aa15.24■□□□□ 0.03
FNDC1-201ENST00000297267 FAM180BQ6P0A1 224 aa15.24■□□□□ 0.03
FNDC1-201ENST00000297267 OR8H3Q8N146 312 aa15.24■□□□□ 0.03
FNDC1-201ENST00000297267 RIPOR3Q96MK2 946 aa15.24■□□□□ 0.03
FNDC1-201ENST00000297267 SOX17Q9H6I2 414 aaPredicted RBP15.24■□□□□ 0.03
FNDC1-201ENST00000297267 TLE6Q9H808 572 aa15.24■□□□□ 0.03
FNDC1-201ENST00000297267 BAZ2AQ9UIF9 1905 aaKnown RBP15.24■□□□□ 0.03
FNDC1-201ENST00000297267 EIF1AYO14602 144 aaKnown RBP15.24■□□□□ 0.03
FNDC1-201ENST00000297267 INSIG1O15503 277 aa15.24■□□□□ 0.03
FNDC1-201ENST00000297267 ATG13O75143 517 aa15.24■□□□□ 0.03
FNDC1-201ENST00000297267 FGF1P05230 155 aa15.24■□□□□ 0.03
FNDC1-201ENST00000297267 SPAM1P38567 509 aa15.24■□□□□ 0.03
FNDC1-201ENST00000297267 PTPN9P43378 593 aa15.24■□□□□ 0.03
FNDC1-201ENST00000297267 ZNF554Q86TJ5 538 aa15.24■□□□□ 0.03
FNDC1-201ENST00000297267 C17orf64Q86WR6 236 aa15.24■□□□□ 0.03
FNDC1-201ENST00000297267 LRRC17Q8N6Y2 441 aa15.24■□□□□ 0.03
FNDC1-201ENST00000297267 ADAMTS15Q8TE58 950 aa15.24■□□□□ 0.03
FNDC1-201ENST00000297267 SLC38A8A6NNN8 435 aa15.23■□□□□ 0.03
FNDC1-201ENST00000297267 C22orf31O95567 290 aa15.23■□□□□ 0.03
FNDC1-201ENST00000297267 CDK9P50750 372 aaKnown RBP15.23■□□□□ 0.03
FNDC1-201ENST00000297267 FOXM1Q08050 763 aa15.23■□□□□ 0.03
FNDC1-201ENST00000297267 TTC23Q5W5X9 447 aa15.23■□□□□ 0.03
FNDC1-201ENST00000297267 LINGO2Q7L985 606 aa15.23■□□□□ 0.03
FNDC1-201ENST00000297267 CXXC5Q7LFL8 322 aaKnown RBP15.23■□□□□ 0.03
FNDC1-201ENST00000297267 MON1AQ86VX9 555 aa15.23■□□□□ 0.03
FNDC1-201ENST00000297267 TTC29Q8NA56 475 aaPredicted RBP15.23■□□□□ 0.03
FNDC1-201ENST00000297267 SNX27Q96L92 541 aa15.23■□□□□ 0.03
FNDC1-201ENST00000297267 FTHL17Q9BXU8 183 aa15.23■□□□□ 0.03
FNDC1-201ENST00000297267 ZNF224Q9NZL3 707 aa15.23■□□□□ 0.03
FNDC1-201ENST00000297267 KCNE2Q9Y6J6 123 aa15.23■□□□□ 0.03
FNDC1-201ENST00000297267 TFPTP0C1Z6 253 aa15.23■□□□□ 0.03
FNDC1-201ENST00000297267 PSKH1P11801 424 aa15.23■□□□□ 0.03
FNDC1-201ENST00000297267 MAPK12P53778 367 aa15.23■□□□□ 0.03
FNDC1-201ENST00000297267 MTTPP55157 894 aa15.23■□□□□ 0.03
FNDC1-201ENST00000297267 MEF2AQ02078 507 aaPredicted RBP15.23■□□□□ 0.03
FNDC1-201ENST00000297267 SLC10A6Q3KNW5 377 aa15.23■□□□□ 0.03
FNDC1-201ENST00000297267 C2orf27AQ580R0 203 aa15.23■□□□□ 0.03
FNDC1-201ENST00000297267 ZDHHC24Q6UX98 284 aa15.23■□□□□ 0.03
FNDC1-201ENST00000297267 PHYKPLQ8IUZ5 450 aa15.23■□□□□ 0.03
FNDC1-201ENST00000297267 TRPV3Q8NET8 790 aa15.23■□□□□ 0.03
FNDC1-201ENST00000297267 SLC25A36Q96CQ1 311 aa15.23■□□□□ 0.03
FNDC1-201ENST00000297267 BTN2A3PQ96KV6 586 aa15.23■□□□□ 0.03
FNDC1-201ENST00000297267 HERC2P3Q9BVR0 1158 aa15.23■□□□□ 0.03
FNDC1-201ENST00000297267 DTLQ9NZJ0 730 aa15.23■□□□□ 0.03
FNDC1-201ENST00000297267 TMEM98Q9Y2Y6 226 aa15.23■□□□□ 0.03
FNDC1-201ENST00000297267 CSTF1Q05048 431 aaKnown RBP15.23■□□□□ 0.03
FNDC1-201ENST00000297267 BMT2Q1RMZ1 405 aa15.23■□□□□ 0.03
FNDC1-201ENST00000297267 VARS2Q5ST30 1063 aaKnown RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms