RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 UAP1L1Q3KQV9 507 aa13.12□□□□□ -0.31
TNFRSF21-201ENST00000296861 GDF6Q6KF10 455 aaPredicted RBP13.12□□□□□ -0.31
TNFRSF21-201ENST00000296861 ANKRD26P1Q6NSI1 321 aa13.12□□□□□ -0.31
TNFRSF21-201ENST00000296861 LETMD1Q6P1Q0 360 aa13.12□□□□□ -0.31
TNFRSF21-201ENST00000296861 ELMSAN1Q6PJG2 1045 aa13.12□□□□□ -0.31
TNFRSF21-201ENST00000296861 LIX1Q8N485 282 aa13.12□□□□□ -0.31
TNFRSF21-201ENST00000296861 ASIC4Q96FT7 647 aa13.12□□□□□ -0.31
TNFRSF21-201ENST00000296861 FEM1CQ96JP0 617 aa13.12□□□□□ -0.31
TNFRSF21-201ENST00000296861 FUNDC2Q9BWH2 189 aa13.12□□□□□ -0.31
TNFRSF21-201ENST00000296861 CIPCQ9C0C6 399 aa13.12□□□□□ -0.31
TNFRSF21-201ENST00000296861 TBCCD1Q9NVR7 557 aa13.12□□□□□ -0.31
TNFRSF21-201ENST00000296861 POLR3BQ9NW08 1133 aaPredicted RBP13.12□□□□□ -0.31
TNFRSF21-201ENST00000296861 TRPV2Q9Y5S1 764 aa13.12□□□□□ -0.31
TNFRSF21-201ENST00000296861 DOCK1Q14185 1865 aa13.12□□□□□ -0.31
TNFRSF21-201ENST00000296861 HHLA1C9JL84 531 aa13.12□□□□□ -0.31
TNFRSF21-201ENST00000296861 ADRA1AP35348 466 aa13.12□□□□□ -0.31
TNFRSF21-201ENST00000296861 PIGAP37287 484 aa13.12□□□□□ -0.31
TNFRSF21-201ENST00000296861 ACADVLP49748 655 aa13.12□□□□□ -0.31
TNFRSF21-201ENST00000296861 PLA2G16P53816 162 aa13.12□□□□□ -0.31
TNFRSF21-201ENST00000296861 ERVPABLB-1P60509 514 aa13.12□□□□□ -0.31
TNFRSF21-201ENST00000296861 BOP1Q14137 746 aaKnown RBP13.12□□□□□ -0.31
TNFRSF21-201ENST00000296861 SPCS2Q15005 226 aa13.12□□□□□ -0.31
TNFRSF21-201ENST00000296861 ABRAXAS2Q15018 415 aa13.12□□□□□ -0.31
TNFRSF21-201ENST00000296861 SMN1Q16637 294 aaKnown RBP13.12□□□□□ -0.31
TNFRSF21-201ENST00000296861 CYP27C1Q4G0S4 372 aa13.12□□□□□ -0.31
TNFRSF21-201ENST00000296861 PDCD4Q53EL6 469 aaKnown RBP13.12□□□□□ -0.31
TNFRSF21-201ENST00000296861 ZCCHC8Q6NZY4 707 aaKnown RBP13.12□□□□□ -0.31
TNFRSF21-201ENST00000296861 RNF19BQ6ZMZ0 732 aa13.12□□□□□ -0.31
TNFRSF21-201ENST00000296861 P3H2Q8IVL5 708 aa13.12□□□□□ -0.31
TNFRSF21-201ENST00000296861 ACDQ96AP0 544 aa13.12□□□□□ -0.31
TNFRSF21-201ENST00000296861 TSGA13Q96PP4 275 aa13.12□□□□□ -0.31
TNFRSF21-201ENST00000296861 PARK7Q99497 189 aaKnown RBP13.12□□□□□ -0.31
TNFRSF21-201ENST00000296861 SDR39U1Q9NRG7 319 aaPredicted RBP13.12□□□□□ -0.31
TNFRSF21-201ENST00000296861 MRGBPQ9NV56 204 aa13.12□□□□□ -0.31
TNFRSF21-201ENST00000296861 PCDH10Q9P2E7 1040 aa13.12□□□□□ -0.31
TNFRSF21-201ENST00000296861 HCSTQ9UBK5 93 aa13.12□□□□□ -0.31
TNFRSF21-201ENST00000296861 RGS5O15539 181 aa13.11□□□□□ -0.31
TNFRSF21-201ENST00000296861 SEC24AO95486 1093 aa13.11□□□□□ -0.31
TNFRSF21-201ENST00000296861 FAM163BP0C2L3 166 aa13.11□□□□□ -0.31
TNFRSF21-201ENST00000296861 ZNF12P17014 697 aa13.11□□□□□ -0.31
TNFRSF21-201ENST00000296861 ALOX12P18054 663 aa13.11□□□□□ -0.31
TNFRSF21-201ENST00000296861 STC1P52823 247 aa13.11□□□□□ -0.31
TNFRSF21-201ENST00000296861 NUDT6P53370 316 aa13.11□□□□□ -0.31
TNFRSF21-201ENST00000296861 MAPRE1Q15691 268 aaKnown RBP13.11□□□□□ -0.31
TNFRSF21-201ENST00000296861 ATP6AP1Q15904 470 aa13.11□□□□□ -0.31
TNFRSF21-201ENST00000296861 UPP1Q16831 310 aa13.11□□□□□ -0.31
TNFRSF21-201ENST00000296861 SZRD1Q7Z422 152 aa13.11□□□□□ -0.31
TNFRSF21-201ENST00000296861 MON1AQ86VX9 555 aa13.11□□□□□ -0.31
TNFRSF21-201ENST00000296861 HID1Q8IV36 788 aa13.11□□□□□ -0.31
TNFRSF21-201ENST00000296861 CCDC103Q8IW40 242 aa13.11□□□□□ -0.31
TNFRSF21-201ENST00000296861 CAPSLQ8WWF8 208 aa13.11□□□□□ -0.31
TNFRSF21-201ENST00000296861 KCNN1Q92952 543 aa13.11□□□□□ -0.31
TNFRSF21-201ENST00000296861 RTP3Q9BQQ7 232 aa13.11□□□□□ -0.31
TNFRSF21-201ENST00000296861 RHNO1Q9BSD3 238 aa13.11□□□□□ -0.31
TNFRSF21-201ENST00000296861 MAF1Q9H063 256 aa13.11□□□□□ -0.31
TNFRSF21-201ENST00000296861 ASB8Q9H765 288 aa13.11□□□□□ -0.31
TNFRSF21-201ENST00000296861 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.11□□□□□ -0.31
TNFRSF21-201ENST00000296861 ULK1O75385 1050 aa13.11□□□□□ -0.31
TNFRSF21-201ENST00000296861 UROSP10746 265 aa13.11□□□□□ -0.31
TNFRSF21-201ENST00000296861 POU2F1P14859 743 aa13.11□□□□□ -0.31
TNFRSF21-201ENST00000296861 RHOQP17081 205 aa13.11□□□□□ -0.31
TNFRSF21-201ENST00000296861 TRPC1P48995 793 aa13.11□□□□□ -0.31
TNFRSF21-201ENST00000296861 NCS1P62166 190 aa13.11□□□□□ -0.31
TNFRSF21-201ENST00000296861 ZNF177Q13360 481 aaPredicted RBP13.11□□□□□ -0.31
TNFRSF21-201ENST00000296861 TTC23Q5W5X9 447 aa13.11□□□□□ -0.31
TNFRSF21-201ENST00000296861 MSANTD2Q6P1R3 559 aa13.11□□□□□ -0.31
TNFRSF21-201ENST00000296861 IGFN1Q86VF2 1251 aa13.11□□□□□ -0.31
TNFRSF21-201ENST00000296861 BRSK1Q8TDC3 778 aa13.11□□□□□ -0.31
TNFRSF21-201ENST00000296861 PTCD2Q8WV60 388 aaKnown RBP13.11□□□□□ -0.31
TNFRSF21-201ENST00000296861 UBE2FQ969M7 185 aa13.11□□□□□ -0.31
TNFRSF21-201ENST00000296861 FUBP1Q96AE4 644 aaKnown RBP13.11□□□□□ -0.31
TNFRSF21-201ENST00000296861 ZBED2Q9BTP6 218 aa13.11□□□□□ -0.31
TNFRSF21-201ENST00000296861 TRIM62Q9BVG3 475 aa13.11□□□□□ -0.31
TNFRSF21-201ENST00000296861 KATNAL1Q9BW62 490 aa13.11□□□□□ -0.31
TNFRSF21-201ENST00000296861 TDRD1Q9BXT4 1180 aaKnown RBP13.11□□□□□ -0.31
TNFRSF21-201ENST00000296861 TRMT13Q9NUP7 481 aaKnown RBP13.11□□□□□ -0.31
TNFRSF21-201ENST00000296861 SEPT3Q9UH03 358 aa13.11□□□□□ -0.31
TNFRSF21-201ENST00000296861 ZNF490Q9ULM2 529 aaPredicted RBP13.11□□□□□ -0.31
TNFRSF21-201ENST00000296861 FCF1Q9Y324 198 aaKnown RBP13.11□□□□□ -0.31
TNFRSF21-201ENST00000296861 RAI2Q9Y5P3 530 aa13.11□□□□□ -0.31
TNFRSF21-201ENST00000296861 ZFP37Q9Y6Q3 630 aaPredicted RBP13.11□□□□□ -0.31
TNFRSF21-201ENST00000296861 TRIP12Q14669 1992 aaPredicted RBP13.11□□□□□ -0.31
TNFRSF21-201ENST00000296861 PSME4Q14997 1843 aa13.11□□□□□ -0.31
TNFRSF21-201ENST00000296861 ZFC3H1O60293 1989 aaKnown RBP13.11□□□□□ -0.31
TNFRSF21-201ENST00000296861 TBX1O43435 398 aa13.11□□□□□ -0.31
TNFRSF21-201ENST00000296861 MGEA5O60502 916 aa13.11□□□□□ -0.31
TNFRSF21-201ENST00000296861 GLUD1P00367 558 aa13.11□□□□□ -0.31
TNFRSF21-201ENST00000296861 ATXN8OSP0DMR3 200 aa13.11□□□□□ -0.31
TNFRSF21-201ENST00000296861 SERPINB1P30740 379 aa13.11□□□□□ -0.31
TNFRSF21-201ENST00000296861 RHOAP61586 193 aa13.11□□□□□ -0.31
TNFRSF21-201ENST00000296861 CD47Q08722 323 aa13.11□□□□□ -0.31
TNFRSF21-201ENST00000296861 CRY1Q16526 586 aa13.11□□□□□ -0.31
TNFRSF21-201ENST00000296861 POM121L1PQ3SYA9 428 aa13.11□□□□□ -0.31
TNFRSF21-201ENST00000296861 CNTN4Q8IWV2 1026 aa13.11□□□□□ -0.31
TNFRSF21-201ENST00000296861 RNF175Q8N4F7 328 aa13.11□□□□□ -0.31
TNFRSF21-201ENST00000296861 TMEM199Q8N511 208 aa13.11□□□□□ -0.31
TNFRSF21-201ENST00000296861 POC5Q8NA72 575 aa13.11□□□□□ -0.31
TNFRSF21-201ENST00000296861 TOP1MTQ969P6 601 aa13.11□□□□□ -0.31
TNFRSF21-201ENST00000296861 APOLD1Q96LR9 279 aa13.11□□□□□ -0.31
TNFRSF21-201ENST00000296861 ARMC1Q9NVT9 282 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms